Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6861
Gene name
LocationContig_37:41570..41963
Strand+
Gene length (bp)393
Transcript length (bp)393
Coding sequence length (bp)393
Protein length (aa) 131

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09435 DUF2015 Fungal protein of unknown function (DUF2015) 4.1E-47 11 125

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q8J0N0|YCB2_SACPA UPF0357 protein YCL012C OS=Saccharomyces paradoxus GN=YCL012C PE=3 SV=1 7 129 7.0E-23
sp|Q876Z1|YCB2_ASHGO UPF0357 protein AAL017W OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=AAL017W PE=3 SV=1 44 129 4.0E-21
sp|Q8J0M6|YCB2_SACBA UPF0357 protein YCL012C OS=Saccharomyces bayanus GN=YCL012C PE=3 SV=1 47 129 1.0E-20
sp|Q8J0M4|YCB2_YEAST UPF0357 protein YCL012C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCL012C PE=1 SV=2 46 129 4.0E-20
sp|O14068|YFF7_SCHPO UPF0357 protein C1687.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1687.07 PE=3 SV=1 44 128 4.0E-17

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 27 0.5

Transmembrane Domains

Domain # Start End Length
1 5 27 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6861
MAYKYILFSLTLFLVITATALFLTRAHWRHHLPDIHLPGAGYIYSRLPSSFAGDIEAGLSSSNFDLAANVDAGDG
RAGLDDAAKAEVLKIMKRRRMTFDQARKVYMETRFKANGIGPDGLPRDPKFVSFS*
Coding >Hirsu2|6861
ATGGCGTACAAGTACATCCTCTTCAGCCTGACGCTGTTCCTCGTCATCACGGCCACGGCGCTCTTCCTGACGCGG
GCCCACTGGCGGCACCACCTGCCCGACATACACCTGCCCGGAGCAGGCTACATCTACTCGCGGCTGCCCAGCAGC
TTTGCCGGCGACATCGAGGCCGGCCTCTCCAGCAGCAACTTTGACCTCGCCGCCAACGTCGACGCGGGCGACGGC
CGCGCCGGCCTCGACGACGCCGCCAAGGCTGAGGTTCTCAAGATCATGAAGAGGAGGAGGATGACGTTCGACCAG
GCGCGCAAGGTCTACATGGAGACCCGGTTCAAGGCAAACGGCATTGGTCCCGACGGACTGCCCAGGGATCCCAAA
TTCGTCAGCTTCTCCTGA
Transcript >Hirsu2|6861
ATGGCGTACAAGTACATCCTCTTCAGCCTGACGCTGTTCCTCGTCATCACGGCCACGGCGCTCTTCCTGACGCGG
GCCCACTGGCGGCACCACCTGCCCGACATACACCTGCCCGGAGCAGGCTACATCTACTCGCGGCTGCCCAGCAGC
TTTGCCGGCGACATCGAGGCCGGCCTCTCCAGCAGCAACTTTGACCTCGCCGCCAACGTCGACGCGGGCGACGGC
CGCGCCGGCCTCGACGACGCCGCCAAGGCTGAGGTTCTCAAGATCATGAAGAGGAGGAGGATGACGTTCGACCAG
GCGCGCAAGGTCTACATGGAGACCCGGTTCAAGGCAAACGGCATTGGTCCCGACGGACTGCCCAGGGATCCCAAA
TTCGTCAGCTTCTCCTGA
Gene >Hirsu2|6861
ATGGCGTACAAGTACATCCTCTTCAGCCTGACGCTGTTCCTCGTCATCACGGCCACGGCGCTCTTCCTGACGCGG
GCCCACTGGCGGCACCACCTGCCCGACATACACCTGCCCGGAGCAGGCTACATCTACTCGCGGCTGCCCAGCAGC
TTTGCCGGCGACATCGAGGCCGGCCTCTCCAGCAGCAACTTTGACCTCGCCGCCAACGTCGACGCGGGCGACGGC
CGCGCCGGCCTCGACGACGCCGCCAAGGCTGAGGTTCTCAAGATCATGAAGAGGAGGAGGATGACGTTCGACCAG
GCGCGCAAGGTCTACATGGAGACCCGGTTCAAGGCAAACGGCATTGGTCCCGACGGACTGCCCAGGGATCCCAAA
TTCGTCAGCTTCTCCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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