© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|6834 |
| Gene name | |
| Location | Contig_368:17394..19213 |
| Strand | - |
| Gene length (bp) | 1819 |
| Transcript length (bp) | 1596 |
| Coding sequence length (bp) | 1596 |
| Protein length (aa) | 532 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 1.1E-59 | 26 | 471 |
| PF00324 | AA_permease | Amino acid permease | 7.2E-33 | 40 | 479 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9ZU50|BAT1_ARATH | Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 | 8 | 490 | 2.0E-87 |
| sp|B9EXZ6|BAT1_ORYSJ | Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 | 13 | 490 | 3.0E-81 |
| sp|P36029|TPO5_YEAST | Polyamine transporter TPO5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO5 PE=1 SV=1 | 2 | 518 | 2.0E-78 |
| sp|O60113|YG64_SCHPO | Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 | 10 | 499 | 3.0E-71 |
| sp|P19807|HNM1_YEAST | Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 | 1 | 523 | 1.0E-69 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9ZU50|BAT1_ARATH | Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 | 8 | 490 | 2.0E-87 |
| sp|B9EXZ6|BAT1_ORYSJ | Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 | 13 | 490 | 3.0E-81 |
| sp|P36029|TPO5_YEAST | Polyamine transporter TPO5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO5 PE=1 SV=1 | 2 | 518 | 2.0E-78 |
| sp|O60113|YG64_SCHPO | Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 | 10 | 499 | 3.0E-71 |
| sp|P19807|HNM1_YEAST | Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 | 1 | 523 | 1.0E-69 |
| sp|O59942|AAP2_NEUCR | Amino-acid permease 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aap-2 PE=2 SV=2 | 10 | 502 | 3.0E-64 |
| sp|Q9US40|YFZ1_SCHPO | Uncharacterized amino-acid permease C1039.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.01 PE=3 SV=1 | 2 | 490 | 1.0E-57 |
| sp|O74537|YCQ4_SCHPO | Uncharacterized amino-acid permease C74.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC74.04 PE=3 SV=1 | 6 | 524 | 1.0E-54 |
| sp|Q09887|YC9D_SCHPO | Uncharacterized amino-acid permease C584.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC584.13 PE=3 SV=1 | 2 | 529 | 3.0E-49 |
| sp|O74248|GPT1_CANAX | Putative polyamine transporter OS=Candida albicans GN=GPT1 PE=3 SV=1 | 8 | 531 | 3.0E-42 |
| sp|Q9C0Z0|YKM2_SCHPO | Uncharacterized amino-acid permease PB24D3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.02c PE=3 SV=1 | 2 | 497 | 1.0E-40 |
| sp|Q10087|YAO8_SCHPO | Uncharacterized amino-acid permease C11D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.08c PE=3 SV=1 | 1 | 529 | 1.0E-35 |
| sp|P32837|UGA4_YEAST | GABA-specific permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UGA4 PE=1 SV=1 | 1 | 470 | 2.0E-35 |
| sp|P53744|BIO5_YEAST | 7-keto 8-aminopelargonic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BIO5 PE=1 SV=1 | 3 | 469 | 6.0E-33 |
| sp|Q9UT18|THI9_SCHPO | Thiamine transporter thi9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thi9 PE=1 SV=1 | 10 | 477 | 4.0E-30 |
| sp|O59813|YCT3_SCHPO | Uncharacterized amino-acid permease C794.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.03 PE=2 SV=1 | 8 | 468 | 5.0E-28 |
| sp|P0AA47|PLAP_ECOLI | Low-affinity putrescine importer PlaP OS=Escherichia coli (strain K12) GN=plaP PE=1 SV=1 | 19 | 349 | 3.0E-10 |
| sp|P0AA48|PLAP_ECO57 | Low-affinity putrescine importer PlaP OS=Escherichia coli O157:H7 GN=plaP PE=3 SV=1 | 19 | 349 | 3.0E-10 |
| sp|O34739|STET_BACSU | Serine/threonine exchanger SteT OS=Bacillus subtilis (strain 168) GN=steT PE=1 SV=1 | 55 | 378 | 2.0E-06 |
| sp|P06775|HIP1_YEAST | Histidine permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HIP1 PE=1 SV=2 | 3 | 360 | 2.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 38 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 31 | 53 | 22 |
| 2 | 63 | 85 | 22 |
| 3 | 92 | 114 | 22 |
| 4 | 147 | 169 | 22 |
| 5 | 181 | 203 | 22 |
| 6 | 223 | 245 | 22 |
| 7 | 262 | 284 | 22 |
| 8 | 310 | 332 | 22 |
| 9 | 365 | 387 | 22 |
| 10 | 391 | 413 | 22 |
| 11 | 426 | 448 | 22 |
| 12 | 463 | 482 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6834 MDDARRASADQALGQFGYRGELPRNLSMMSILGLSFAIMAVPFGLSTTLSITLTNGQAVSVLYGWLLVSLISVCI AASLAEICAVFPTAGGVYYWSATLSPPAWAPLVSFVDGWLTLVGNWTVTLSINFSGAQLLLSAVSLFDPDYVAGP WHTVLAFWAVMLLCALVNAFASRHLDFINKLCIYWTSASVLVILVTLLATARHRRDAAFVFAHYDASASGWPPAW SFFVGLLQPAYTLTGYGMVASMCEEVQNPEREVPRAIVLSVVAAGVTGIVYILPLLFVLPDVQMLLQVANSQPIG LLFKTVTGSAGGGLGLLILILGILLFAGIGALTAASRCTYAFARDGAVPGHQLWSRVNRRLDMPLWALGLSTAVD CVLGCIYFGSSAAFNSFTGVATICLSTSYGVPVLVSLLRGRRHVSRSPFPLGRFGVAINVVCVVWIVFAVVIFCM PVSLPVSPSSMNYASVVFAGFAAIAFVWYFAYARRNFTGPPVVSVDSLDNGVVDGRSLKEAGSNGAADSEDTPRP TVSKLE* |
| Coding | >Hirsu2|6834 ATGGACGACGCCCGCCGCGCGTCGGCCGACCAGGCGCTGGGCCAGTTCGGCTACCGGGGCGAGCTGCCGCGCAAC CTCAGCATGATGAGCATCCTGGGCCTGTCGTTCGCCATCATGGCCGTGCCGTTCGGCCTGTCGACGACGCTGTCC ATCACGCTGACCAACGGCCAGGCCGTCTCGGTCCTGTACGGCTGGCTTCTCGTCTCGCTCATCTCCGTCTGCATC GCCGCCTCGCTCGCCGAGATCTGCGCCGTCTTCCCGACCGCCGGCGGCGTCTACTACTGGTCCGCCACGCTGAGC CCGCCCGCCTGGGCGCCGCTCGTCAGCTTCGTCGACGGCTGGCTCACCCTCGTCGGCAACTGGACCGTCACCCTG TCCATCAACTTCTCCGGCGCCCAGCTGCTGCTCAGCGCCGTCTCCCTCTTCGACCCGGACTACGTCGCCGGGCCC TGGCACACCGTCCTCGCCTTCTGGGCCGTCATGCTCCTGTGCGCCCTCGTCAACGCCTTCGCCTCGCGCCACCTC GACTTCATCAACAAGCTGTGCATCTACTGGACCTCGGCCAGCGTCCTCGTCATCCTCGTCACCCTGCTCGCCACC GCCCGCCACCGCCGCGACGCCGCCTTCGTCTTCGCCCACTACGACGCCTCGGCCAGCGGCTGGCCGCCCGCCTGG TCCTTCTTCGTCGGCCTCTTGCAACCCGCCTACACCCTGACCGGCTACGGCATGGTCGCCTCCATGTGCGAAGAG GTCCAGAACCCCGAGCGCGAGGTGCCCAGGGCCATCGTCCTCTCCGTCGTCGCCGCCGGCGTCACCGGCATCGTC TACATCCTGCCCCTGCTCTTCGTCCTGCCCGACGTCCAGATGCTGCTCCAGGTCGCCAACTCGCAGCCCATCGGC CTGCTGTTCAAGACCGTCACCGGCTCCGCCGGTGGCGGCCTCGGCCTCCTCATCCTCATCCTCGGCATCCTCCTC TTCGCCGGCATCGGCGCCCTGACCGCCGCCTCGCGCTGCACCTACGCCTTCGCCCGCGACGGCGCCGTCCCCGGC CACCAGCTTTGGAGCCGCGTCAACCGCCGGCTCGACATGCCGCTCTGGGCCCTCGGCCTCTCCACCGCCGTCGAC TGCGTCCTCGGCTGCATCTACTTCGGCTCCTCCGCCGCCTTCAACTCCTTCACCGGCGTCGCCACCATCTGCCTC TCCACCTCGTACGGCGTCCCCGTCCTCGTCAGCCTCCTCCGTGGCCGCCGCCACGTCAGCCGCTCGCCCTTCCCG CTCGGCCGCTTCGGCGTCGCCATCAACGTCGTCTGTGTCGTCTGGATCGTCTTCGCCGTCGTCATCTTCTGCATG CCCGTCTCCCTGCCCGTCAGCCCGAGCTCCATGAATTACGCCTCCGTCGTCTTCGCCGGCTTCGCCGCCATCGCC TTCGTCTGGTACTTTGCCTATGCGCGCCGCAACTTCACCGGGCCCCCCGTCGTCAGTGTCGACTCGCTCGACAAC GGAGTCGTCGACGGGAGATCGCTCAAGGAGGCCGGCAGCAACGGCGCCGCCGATTCGGAGGATACGCCCAGGCCC ACTGTGTCCAAGCTGGAATAG |
| Transcript | >Hirsu2|6834 ATGGACGACGCCCGCCGCGCGTCGGCCGACCAGGCGCTGGGCCAGTTCGGCTACCGGGGCGAGCTGCCGCGCAAC CTCAGCATGATGAGCATCCTGGGCCTGTCGTTCGCCATCATGGCCGTGCCGTTCGGCCTGTCGACGACGCTGTCC ATCACGCTGACCAACGGCCAGGCCGTCTCGGTCCTGTACGGCTGGCTTCTCGTCTCGCTCATCTCCGTCTGCATC GCCGCCTCGCTCGCCGAGATCTGCGCCGTCTTCCCGACCGCCGGCGGCGTCTACTACTGGTCCGCCACGCTGAGC CCGCCCGCCTGGGCGCCGCTCGTCAGCTTCGTCGACGGCTGGCTCACCCTCGTCGGCAACTGGACCGTCACCCTG TCCATCAACTTCTCCGGCGCCCAGCTGCTGCTCAGCGCCGTCTCCCTCTTCGACCCGGACTACGTCGCCGGGCCC TGGCACACCGTCCTCGCCTTCTGGGCCGTCATGCTCCTGTGCGCCCTCGTCAACGCCTTCGCCTCGCGCCACCTC GACTTCATCAACAAGCTGTGCATCTACTGGACCTCGGCCAGCGTCCTCGTCATCCTCGTCACCCTGCTCGCCACC GCCCGCCACCGCCGCGACGCCGCCTTCGTCTTCGCCCACTACGACGCCTCGGCCAGCGGCTGGCCGCCCGCCTGG TCCTTCTTCGTCGGCCTCTTGCAACCCGCCTACACCCTGACCGGCTACGGCATGGTCGCCTCCATGTGCGAAGAG GTCCAGAACCCCGAGCGCGAGGTGCCCAGGGCCATCGTCCTCTCCGTCGTCGCCGCCGGCGTCACCGGCATCGTC TACATCCTGCCCCTGCTCTTCGTCCTGCCCGACGTCCAGATGCTGCTCCAGGTCGCCAACTCGCAGCCCATCGGC CTGCTGTTCAAGACCGTCACCGGCTCCGCCGGTGGCGGCCTCGGCCTCCTCATCCTCATCCTCGGCATCCTCCTC TTCGCCGGCATCGGCGCCCTGACCGCCGCCTCGCGCTGCACCTACGCCTTCGCCCGCGACGGCGCCGTCCCCGGC CACCAGCTTTGGAGCCGCGTCAACCGCCGGCTCGACATGCCGCTCTGGGCCCTCGGCCTCTCCACCGCCGTCGAC TGCGTCCTCGGCTGCATCTACTTCGGCTCCTCCGCCGCCTTCAACTCCTTCACCGGCGTCGCCACCATCTGCCTC TCCACCTCGTACGGCGTCCCCGTCCTCGTCAGCCTCCTCCGTGGCCGCCGCCACGTCAGCCGCTCGCCCTTCCCG CTCGGCCGCTTCGGCGTCGCCATCAACGTCGTCTGTGTCGTCTGGATCGTCTTCGCCGTCGTCATCTTCTGCATG CCCGTCTCCCTGCCCGTCAGCCCGAGCTCCATGAATTACGCCTCCGTCGTCTTCGCCGGCTTCGCCGCCATCGCC TTCGTCTGGTACTTTGCCTATGCGCGCCGCAACTTCACCGGGCCCCCCGTCGTCAGTGTCGACTCGCTCGACAAC GGAGTCGTCGACGGGAGATCGCTCAAGGAGGCCGGCAGCAACGGCGCCGCCGATTCGGAGGATACGCCCAGGCCC ACTGTGTCCAAGCTGGAATAG |
| Gene | >Hirsu2|6834 ATGGACGACGCCCGCCGCGCGTCGGCCGACCAGGCGCTGGGCCAGTTCGGCTACCGGGGCGAGCTGCCGCGCAAC CTCAGCATGATGAGCATCCTGGGCCTGTCGTTCGCCATCATGGCCGTGCCGTTCGGCCTGTCGACGACGCTGTCC ATCACGCTGACCAACGGCCAGGCCGTCTCGGTCCTGTACGGCTGGCTTCTCGTCTCGCTCATCTCCGTCTGCATC GCCGCCTCGCTCGCCGAGATCTGCGCCGTCTTCCCGACCGCCGGCGGCGTCTACTACTGGTCCGCCACGCTGAGC CCGCCCGCCTGGGCGCCGCTCGTCAGCTTCGTCGACGGCTGGCTCACCCTCGTCGGCAACTGGACCGTCACCCTG TCCATCAACTTCTCCGGCGCCCAGCTGCTGCTCAGCGCCGTCTCCCTCTTCGACCCGGACTACGTCGCCGGGCCC TGGCACACCGTCCTCGCCTTCTGGGCCGTCATGCTCCTGTGCGCCCTCGTCAACGCCTTCGCCTCGCGCCACCTC GACTTCATCAACAAGCTGTGCATCTACTGGACCTCGGCCAGCGTCCTCGTCATCCTCGTCACCCTGCTCGCCACC GCCCGCCACCGCCGCGACGCCGCCTTCGTCTTCGCCCACTACGACGCCTCGGCCAGCGGCTGGCCGCCCGCCTGG TCCTTCTTCGTCGGCCTCTTGCAACGTGAGTTCTGTTGCCCCCCTCCCCTCCTCTGTTGTGCATCCCTCCTCGAC CATTCTCTCGAGATGGGCCTTGACGAGTCTCGAGAGAGACAGAAAGAAAGGTCTCGAGAGAGATAGAAAGAAAGG TTTCGAGAGAGACAGAAAAAGAAAGTCTCGCGAGAGACAGAAAGAAAGTCCCCCCTTGTCGCCGACTCGCTGACG AGAACCGACCTCGCCGTCTCCAGCCGCCTACACCCTGACCGGCTACGGCATGGTCGCCTCCATGTGCGAAGAGGT CCAGAACCCCGAGCGCGAGGTGCCCAGGGCCATCGTCCTCTCCGTCGTCGCCGCCGGCGTCACCGGCATCGTCTA CATCCTGCCCCTGCTCTTCGTCCTGCCCGACGTCCAGATGCTGCTCCAGGTCGCCAACTCGCAGCCCATCGGCCT GCTGTTCAAGACCGTCACCGGCTCCGCCGGTGGCGGCCTCGGCCTCCTCATCCTCATCCTCGGCATCCTCCTCTT CGCCGGCATCGGCGCCCTGACCGCCGCCTCGCGCTGCACCTACGCCTTCGCCCGCGACGGCGCCGTCCCCGGCCA CCAGCTTTGGAGCCGCGTCAACCGCCGGCTCGACATGCCGCTCTGGGCCCTCGGCCTCTCCACCGCCGTCGACTG CGTCCTCGGCTGCATCTACTTCGGCTCCTCCGCCGCCTTCAACTCCTTCACCGGCGTCGCCACCATCTGCCTCTC CACCTCGTACGGCGTCCCCGTCCTCGTCAGCCTCCTCCGTGGCCGCCGCCACGTCAGCCGCTCGCCCTTCCCGCT CGGCCGCTTCGGCGTCGCCATCAACGTCGTCTGTGTCGTCTGGATCGTCTTCGCCGTCGTCATCTTCTGCATGCC CGTCTCCCTGCCCGTCAGCCCGAGCTCCATGAATTACGCCTCCGTCGTCTTCGCCGGCTTCGCCGCCATCGCCTT CGTCTGGTACTTTGCCTATGCGCGCCGCAACTTCACCGGGCCCCCCGTCGTCAGTGTCGACTCGCTCGACAACGG AGTCGTCGACGGGAGATCGCTCAAGGAGGCCGGCAGCAACGGCGCCGCCGATTCGGAGGATACGCCCAGGCCCAC TGTGTCCAAGCTGGAATAG |