Protein ID | Hirsu2|6831 |
Gene name | |
Location | Contig_368:11939..12400 |
Strand | + |
Gene length (bp) | 461 |
Transcript length (bp) | 372 |
Coding sequence length (bp) | 372 |
Protein length (aa) | 124 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0927 | 0.0476 | 0.9497 | 0.0876 | 0.0765 | 0.0199 | 0.0655 | 0.135 | 0.1096 | 0.0029 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 20 | 0.999758 |
Orthofinder run ID | 4 |
Orthogroup | 507 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6831 MVKFTIVSLAVAAAIPLAAGRTCLDGLRYCGHTLLEIGDYQAEMNAQIEESRACSEKNVTDQFLWYCKMGEVLLL GDCAGGCSNQGWGNSDFCKPDWKAAVRCDPWGGGPGGHWAWADKDKSS* |
Coding | >Hirsu2|6831 ATGGTCAAGTTTACCATCGTCTCTCTCGCCGTGGCGGCCGCGATCCCCCTGGCCGCCGGCCGGACTTGCCTCGAC GGGCTCCGCTACTGCGGCCATACGCTCCTCGAGATAGGCGACTACCAGGCCGAAATGAACGCTCAGATTGAGGAG AGCAGGGCGTGCTCGGAAAAGAACGTGACGGACCAGTTCCTGTGGTACTGCAAAATGGGCGAGGTCCTCTTGCTC GGCGACTGCGCCGGCGGCTGCTCGAACCAGGGCTGGGGGAACTCGGACTTTTGCAAGCCGGACTGGAAAGCCGCT GTCCGGTGCGATCCCTGGGGCGGCGGCCCCGGCGGCCACTGGGCCTGGGCGGACAAGGACAAGTCAAGCTGA |
Transcript | >Hirsu2|6831 ATGGTCAAGTTTACCATCGTCTCTCTCGCCGTGGCGGCCGCGATCCCCCTGGCCGCCGGCCGGACTTGCCTCGAC GGGCTCCGCTACTGCGGCCATACGCTCCTCGAGATAGGCGACTACCAGGCCGAAATGAACGCTCAGATTGAGGAG AGCAGGGCGTGCTCGGAAAAGAACGTGACGGACCAGTTCCTGTGGTACTGCAAAATGGGCGAGGTCCTCTTGCTC GGCGACTGCGCCGGCGGCTGCTCGAACCAGGGCTGGGGGAACTCGGACTTTTGCAAGCCGGACTGGAAAGCCGCT GTCCGGTGCGATCCCTGGGGCGGCGGCCCCGGCGGCCACTGGGCCTGGGCGGACAAGGACAAGTCAAGCTGA |
Gene | >Hirsu2|6831 ATGGTCAAGTTTACCATCGTCTCTCTCGCCGTGGCGGCCGCGATCCCCCTGGCCGCCGGCCGGACTTGCCTCGAC GGGCTCCGCTACTGCGGCCATACGCTCCTCGAGATAGGTAAGAGGCCGTGTGTGGGCGGATATATCAAAACCACT TGCGTCCGCCAACCGGGCCCGCTGACATGCTTGCGTTTTGTCTCGAACAAGGCGACTACCAGGCCGAAATGAACG CTCAGATTGAGGAGAGCAGGGCGTGCTCGGAAAAGAACGTGACGGACCAGTTCCTGTGGTACTGCAAAATGGGCG AGGTCCTCTTGCTCGGCGACTGCGCCGGCGGCTGCTCGAACCAGGGCTGGGGGAACTCGGACTTTTGCAAGCCGG ACTGGAAAGCCGCTGTCCGGTGCGATCCCTGGGGCGGCGGCCCCGGCGGCCACTGGGCCTGGGCGGACAAGGACA AGTCAAGCTGA |