© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6823 |
| Gene name | |
| Location | Contig_367:9345..10056 |
| Strand | + |
| Gene length (bp) | 711 |
| Transcript length (bp) | 711 |
| Coding sequence length (bp) | 711 |
| Protein length (aa) | 237 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum | Signal peptide | 0.2696 | 0.1138 | 0.4344 | 0.2345 | 0.2988 | 0.0259 | 0.4481 | 0.2909 | 0.2542 | 0.209 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 3555 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6823 MAHSGWLQWTIVLVLTALCLSLVVVGQVVATYSAAYRAAPQELATFVDAVDFSIQENESYDRDVAKVQRLDDKLR LGRLLREIQKGGDDLREELNRLLVEEGSSALTRTARLLWALKRAELKERVRSLDLLRMRFLVVYMGIIAQQPPPA PPLPTGPDKTLPRAVSLQPARHKPLADGMAKRPPQRRLTTQAIGHQENVSTPHRKGWAGVVEELQTSPRMQRRHA SIEQAMMPRPP* |
| Coding | >Hirsu2|6823 ATGGCCCATTCCGGCTGGCTGCAATGGACCATCGTCCTCGTCCTGACGGCCCTGTGCCTGTCCTTGGTCGTCGTC GGCCAGGTCGTAGCGACGTACTCGGCCGCCTATCGCGCCGCGCCCCAGGAACTCGCCACCTTCGTCGACGCCGTC GACTTCTCCATCCAGGAGAACGAGAGCTACGACCGCGACGTGGCCAAGGTCCAGCGCCTCGACGACAAGCTCCGC CTCGGCCGCCTGCTGCGCGAGATCCAGAAGGGAGGCGACGACCTGCGCGAGGAGCTCAACCGCCTGCTCGTCGAG GAGGGCTCCTCCGCCCTGACCAGGACCGCCCGCCTGCTCTGGGCCCTGAAGCGCGCCGAGCTCAAGGAGAGGGTG CGGTCGCTCGACCTGCTGCGCATGCGCTTCCTCGTCGTCTACATGGGCATCATCGCCCAGCAGCCCCCGCCCGCG CCGCCTCTGCCCACGGGCCCGGACAAGACGTTGCCGCGGGCCGTCTCCCTCCAGCCCGCACGGCACAAGCCGCTC GCCGACGGCATGGCCAAACGCCCGCCCCAGCGCCGGCTGACGACGCAGGCCATTGGCCACCAGGAGAACGTCTCG ACGCCCCATAGGAAGGGCTGGGCCGGCGTCGTCGAGGAACTGCAGACGTCGCCGCGCATGCAGCGCCGCCATGCC TCGATAGAACAGGCCATGATGCCCAGGCCCCCGTGA |
| Transcript | >Hirsu2|6823 ATGGCCCATTCCGGCTGGCTGCAATGGACCATCGTCCTCGTCCTGACGGCCCTGTGCCTGTCCTTGGTCGTCGTC GGCCAGGTCGTAGCGACGTACTCGGCCGCCTATCGCGCCGCGCCCCAGGAACTCGCCACCTTCGTCGACGCCGTC GACTTCTCCATCCAGGAGAACGAGAGCTACGACCGCGACGTGGCCAAGGTCCAGCGCCTCGACGACAAGCTCCGC CTCGGCCGCCTGCTGCGCGAGATCCAGAAGGGAGGCGACGACCTGCGCGAGGAGCTCAACCGCCTGCTCGTCGAG GAGGGCTCCTCCGCCCTGACCAGGACCGCCCGCCTGCTCTGGGCCCTGAAGCGCGCCGAGCTCAAGGAGAGGGTG CGGTCGCTCGACCTGCTGCGCATGCGCTTCCTCGTCGTCTACATGGGCATCATCGCCCAGCAGCCCCCGCCCGCG CCGCCTCTGCCCACGGGCCCGGACAAGACGTTGCCGCGGGCCGTCTCCCTCCAGCCCGCACGGCACAAGCCGCTC GCCGACGGCATGGCCAAACGCCCGCCCCAGCGCCGGCTGACGACGCAGGCCATTGGCCACCAGGAGAACGTCTCG ACGCCCCATAGGAAGGGCTGGGCCGGCGTCGTCGAGGAACTGCAGACGTCGCCGCGCATGCAGCGCCGCCATGCC TCGATAGAACAGGCCATGATGCCCAGGCCCCCGTGA |
| Gene | >Hirsu2|6823 ATGGCCCATTCCGGCTGGCTGCAATGGACCATCGTCCTCGTCCTGACGGCCCTGTGCCTGTCCTTGGTCGTCGTC GGCCAGGTCGTAGCGACGTACTCGGCCGCCTATCGCGCCGCGCCCCAGGAACTCGCCACCTTCGTCGACGCCGTC GACTTCTCCATCCAGGAGAACGAGAGCTACGACCGCGACGTGGCCAAGGTCCAGCGCCTCGACGACAAGCTCCGC CTCGGCCGCCTGCTGCGCGAGATCCAGAAGGGAGGCGACGACCTGCGCGAGGAGCTCAACCGCCTGCTCGTCGAG GAGGGCTCCTCCGCCCTGACCAGGACCGCCCGCCTGCTCTGGGCCCTGAAGCGCGCCGAGCTCAAGGAGAGGGTG CGGTCGCTCGACCTGCTGCGCATGCGCTTCCTCGTCGTCTACATGGGCATCATCGCCCAGCAGCCCCCGCCCGCG CCGCCTCTGCCCACGGGCCCGGACAAGACGTTGCCGCGGGCCGTCTCCCTCCAGCCCGCACGGCACAAGCCGCTC GCCGACGGCATGGCCAAACGCCCGCCCCAGCGCCGGCTGACGACGCAGGCCATTGGCCACCAGGAGAACGTCTCG ACGCCCCATAGGAAGGGCTGGGCCGGCGTCGTCGAGGAACTGCAGACGTCGCCGCGCATGCAGCGCCGCCATGCC TCGATAGAACAGGCCATGATGCCCAGGCCCCCGTGA |