Protein ID | Hirsu2|6789 |
Gene name | |
Location | Contig_362:20163..21821 |
Strand | + |
Gene length (bp) | 1658 |
Transcript length (bp) | 1263 |
Coding sequence length (bp) | 1263 |
Protein length (aa) | 421 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02535 | Zip | ZIP Zinc transporter | 5.2E-56 | 79 | 416 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9XUC4|HKE41_CAEEL | Histidine-rich membrane protein KE4 homolog 1 OS=Caenorhabditis elegans GN=hke-4.1 PE=2 SV=2 | 55 | 417 | 2.0E-47 |
sp|A8WMY3|HKE41_CAEBR | Histidine-rich membrane protein KE4 homolog 1 OS=Caenorhabditis briggsae GN=hke-4.1 PE=3 SV=2 | 49 | 417 | 4.0E-47 |
sp|Q31125|S39A7_MOUSE | Zinc transporter SLC39A7 OS=Mus musculus GN=Slc39a7 PE=1 SV=2 | 82 | 387 | 2.0E-44 |
sp|P40544|YKE4_YEAST | Zinc transporter YKE4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKE4 PE=1 SV=1 | 78 | 419 | 5.0E-42 |
sp|Q5TJF6|S39A7_CANLF | Zinc transporter SLC39A7 OS=Canis lupus familiaris GN=SLC39A7 PE=3 SV=1 | 82 | 387 | 2.0E-40 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9XUC4|HKE41_CAEEL | Histidine-rich membrane protein KE4 homolog 1 OS=Caenorhabditis elegans GN=hke-4.1 PE=2 SV=2 | 55 | 417 | 2.0E-47 |
sp|A8WMY3|HKE41_CAEBR | Histidine-rich membrane protein KE4 homolog 1 OS=Caenorhabditis briggsae GN=hke-4.1 PE=3 SV=2 | 49 | 417 | 4.0E-47 |
sp|Q31125|S39A7_MOUSE | Zinc transporter SLC39A7 OS=Mus musculus GN=Slc39a7 PE=1 SV=2 | 82 | 387 | 2.0E-44 |
sp|P40544|YKE4_YEAST | Zinc transporter YKE4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKE4 PE=1 SV=1 | 78 | 419 | 5.0E-42 |
sp|Q5TJF6|S39A7_CANLF | Zinc transporter SLC39A7 OS=Canis lupus familiaris GN=SLC39A7 PE=3 SV=1 | 82 | 387 | 2.0E-40 |
sp|Q9UT11|YLW3_SCHPO | Uncharacterized zinc transporter P8A3.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAP8A3.03 PE=3 SV=1 | 75 | 394 | 4.0E-40 |
sp|Q92504|S39A7_HUMAN | Zinc transporter SLC39A7 OS=Homo sapiens GN=SLC39A7 PE=1 SV=2 | 82 | 387 | 9.0E-40 |
sp|Q9VAF0|S39AD_DROME | Zinc transporter ZIP13 homolog OS=Drosophila melanogaster GN=Zip99C PE=2 SV=1 | 78 | 413 | 4.0E-39 |
sp|Q9XTQ7|HKE42_CAEEL | Histidine-rich membrane protein KE4 homolog 2 OS=Caenorhabditis elegans GN=hke-4.2 PE=3 SV=2 | 75 | 388 | 3.0E-38 |
sp|Q5ZI20|S39AD_CHICK | Zinc transporter ZIP13 OS=Gallus gallus GN=SLC39A13 PE=2 SV=1 | 109 | 387 | 4.0E-36 |
sp|Q2M1K6|S39AD_RAT | Zinc transporter ZIP13 OS=Rattus norvegicus GN=Slc39a13 PE=2 SV=1 | 109 | 387 | 1.0E-35 |
sp|Q8BZH0|S39AD_MOUSE | Zinc transporter ZIP13 OS=Mus musculus GN=Slc39a13 PE=2 SV=1 | 109 | 387 | 5.0E-35 |
sp|Q9V3A4|CSUP_DROME | Protein catecholamines up OS=Drosophila melanogaster GN=Catsup PE=2 SV=1 | 85 | 417 | 8.0E-34 |
sp|Q96H72|S39AD_HUMAN | Zinc transporter ZIP13 OS=Homo sapiens GN=SLC39A13 PE=1 SV=3 | 109 | 417 | 4.0E-33 |
sp|Q8AW42|S39AD_DANRE | Zinc transporter ZIP13 OS=Danio rerio GN=slc39a13 PE=2 SV=1 | 108 | 417 | 1.0E-32 |
sp|Q5RFD5|S39A7_PONAB | Zinc transporter SLC39A7 OS=Pongo abelii GN=SLC39A7 PE=2 SV=1 | 233 | 387 | 8.0E-32 |
sp|A8X482|HKE42_CAEBR | Histidine-rich membrane protein KE4 homolog 2 OS=Caenorhabditis briggsae GN=hke-4.2 PE=3 SV=2 | 247 | 387 | 6.0E-31 |
sp|Q9PUB8|S39A7_DANRE | Zinc transporter Slc39a7 (Fragment) OS=Danio rerio GN=slc39a7 PE=2 SV=1 | 80 | 304 | 3.0E-29 |
sp|A5D7H1|S39AD_BOVIN | Zinc transporter ZIP13 OS=Bos taurus GN=SLC39A13 PE=2 SV=1 | 109 | 417 | 5.0E-28 |
sp|Q5R6I6|S39AD_PONAB | Zinc transporter ZIP13 OS=Pongo abelii GN=SLC39A13 PE=2 SV=1 | 249 | 417 | 2.0E-26 |
sp|Q9M647|IAR1_ARATH | IAA-alanine resistance protein 1 OS=Arabidopsis thaliana GN=IAR1 PE=1 SV=3 | 80 | 417 | 4.0E-24 |
sp|Q504Y0|S39AC_HUMAN | Zinc transporter ZIP12 OS=Homo sapiens GN=SLC39A12 PE=2 SV=3 | 109 | 385 | 1.0E-23 |
sp|Q5FWH7|S39AC_MOUSE | Zinc transporter ZIP12 OS=Mus musculus GN=Slc39a12 PE=1 SV=1 | 109 | 385 | 7.0E-21 |
sp|Q08E40|S39AC_BOVIN | Zinc transporter ZIP12 OS=Bos taurus GN=SLC39A12 PE=2 SV=1 | 109 | 385 | 8.0E-21 |
sp|Q6PEH9|S39AA_DANRE | Zinc transporter ZIP10 OS=Danio rerio GN=slc39a10 PE=2 SV=1 | 253 | 417 | 2.0E-19 |
sp|Q95KA5|S39AC_MACFA | Zinc transporter ZIP12 OS=Macaca fascicularis GN=SLC39A12 PE=2 SV=1 | 109 | 385 | 3.0E-19 |
sp|Q1KZG0|S39A4_BOVIN | Zinc transporter ZIP4 OS=Bos taurus GN=SLC39A4 PE=1 SV=1 | 109 | 420 | 5.0E-19 |
sp|Q9ULF5|S39AA_HUMAN | Zinc transporter ZIP10 OS=Homo sapiens GN=SLC39A10 PE=1 SV=2 | 253 | 420 | 2.0E-18 |
sp|Q6P5F6|S39AA_MOUSE | Zinc transporter ZIP10 OS=Mus musculus GN=Slc39a10 PE=1 SV=1 | 253 | 420 | 2.0E-18 |
sp|A4IGY6|S39AE_XENTR | Zinc transporter ZIP14 OS=Xenopus tropicalis GN=slc39a14 PE=2 SV=1 | 84 | 417 | 3.0E-18 |
sp|Q9VSL7|FOI_DROME | Zinc transporter foi OS=Drosophila melanogaster GN=foi PE=1 SV=3 | 253 | 420 | 9.0E-18 |
sp|Q4V887|S39A6_RAT | Zinc transporter ZIP6 OS=Rattus norvegicus GN=Slc39a6 PE=1 SV=1 | 253 | 417 | 3.0E-17 |
sp|Q8C145|S39A6_MOUSE | Zinc transporter ZIP6 OS=Mus musculus GN=Slc39a6 PE=1 SV=1 | 253 | 417 | 5.0E-17 |
sp|Q13433|S39A6_HUMAN | Zinc transporter ZIP6 OS=Homo sapiens GN=SLC39A6 PE=1 SV=3 | 253 | 417 | 7.0E-17 |
sp|Q5R9M9|S39A6_PONAB | Zinc transporter ZIP6 OS=Pongo abelii GN=SLC39A6 PE=2 SV=1 | 253 | 417 | 9.0E-17 |
sp|A0JPN2|S39A4_RAT | Zinc transporter ZIP4 OS=Rattus norvegicus GN=Slc39a4 PE=2 SV=1 | 84 | 420 | 2.0E-16 |
sp|Q78IQ7|S39A4_MOUSE | Zinc transporter ZIP4 OS=Mus musculus GN=Slc39a4 PE=1 SV=1 | 64 | 420 | 5.0E-16 |
sp|A5D7L5|S39AE_BOVIN | Zinc transporter ZIP14 OS=Bos taurus GN=SLC39A14 PE=2 SV=1 | 109 | 419 | 1.0E-15 |
sp|Q75N73|S39AE_MOUSE | Zinc transporter ZIP14 OS=Mus musculus GN=Slc39a14 PE=1 SV=1 | 109 | 419 | 2.0E-15 |
sp|Q15043|S39AE_HUMAN | Zinc transporter ZIP14 OS=Homo sapiens GN=SLC39A14 PE=1 SV=3 | 109 | 419 | 3.0E-15 |
sp|Q5FVQ0|S39A8_RAT | Zinc transporter ZIP8 OS=Rattus norvegicus GN=Slc39a8 PE=2 SV=1 | 43 | 419 | 5.0E-15 |
sp|Q5RAB7|S39AE_PONAB | Zinc transporter ZIP14 OS=Pongo abelii GN=SLC39A14 PE=2 SV=2 | 109 | 417 | 9.0E-15 |
sp|Q6P5W5|S39A4_HUMAN | Zinc transporter ZIP4 OS=Homo sapiens GN=SLC39A4 PE=1 SV=3 | 240 | 420 | 4.0E-14 |
sp|Q91W10|S39A8_MOUSE | Zinc transporter ZIP8 OS=Mus musculus GN=Slc39a8 PE=2 SV=1 | 43 | 419 | 2.0E-13 |
sp|Q9D856|S39A5_MOUSE | Zinc transporter ZIP5 OS=Mus musculus GN=Slc39a5 PE=1 SV=1 | 253 | 387 | 3.0E-12 |
sp|Q9C0K1|S39A8_HUMAN | Zinc transporter ZIP8 OS=Homo sapiens GN=SLC39A8 PE=2 SV=1 | 43 | 419 | 6.0E-12 |
sp|Q6ZMH5|S39A5_HUMAN | Zinc transporter ZIP5 OS=Homo sapiens GN=SLC39A5 PE=1 SV=3 | 253 | 307 | 7.0E-11 |
sp|Q29175|S39A7_PIG | Zinc transporter SLC39A7 (Fragments) OS=Sus scrofa GN=SLC39A7 PE=2 SV=2 | 284 | 311 | 3.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0030001 | metal ion transport | Yes |
GO:0046873 | metal ion transmembrane transporter activity | Yes |
GO:0016020 | membrane | Yes |
GO:0055085 | transmembrane transport | Yes |
GO:0005215 | transporter activity | No |
GO:0051179 | localization | No |
GO:0051234 | establishment of localization | No |
GO:0008150 | biological_process | No |
GO:0009987 | cellular process | No |
GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
GO:0022857 | transmembrane transporter activity | No |
GO:0006811 | ion transport | No |
GO:0015075 | ion transmembrane transporter activity | No |
GO:0008324 | cation transmembrane transporter activity | No |
GO:0022890 | inorganic cation transmembrane transporter activity | No |
GO:0006812 | cation transport | No |
GO:0006810 | transport | No |
GO:0110165 | cellular anatomical entity | No |
GO:0003674 | molecular_function | No |
GO:0005575 | cellular_component | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Endoplasmic reticulum|Lysosome/Vacuole | Signal peptide|Transmembrane domain | 0.1124 | 0.1061 | 0.3176 | 0.2424 | 0.1524 | 0.0504 | 0.7322 | 0.5921 | 0.4635 | 0.0112 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 22 | 0.99976 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
2 | 78 | 100 | 22 |
3 | 107 | 129 | 22 |
4 | 152 | 169 | 17 |
5 | 318 | 340 | 22 |
6 | 364 | 386 | 22 |
7 | 399 | 418 | 19 |
Orthofinder run ID | 4 |
Orthogroup | 5517 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6789 MAPPMRLGLLVAAASLLVLAAAQDAAAAASLSLDALDEQLQTCPIVQHLNAAKHRQHASHAQSPTTRLFGLLFPS SRPAVNALLATLYISGPPNFLLALCPTNIDPASLSVMVAFAVGGLLGDTLFHLLPEIFVGEDDDERARFVLVEPN RNLLLGLGILVGFMTFVAMDKGLRIATGGGSGGHDHGHGHAHSHGQAEPANGAVAAVSTATDLDVVGGGQAKARK RQAGEPTSNADKTKEVVAVNPSVKLGGYLNLIADFTHNITDGLAMSASFYASPTVGATTTMAVFFHEIPHEVGDF ALLVQSGFSKRAAMASQFVTAVGALLGTLIGIAVQELGGGGGHEGAAMARDAGIWGTSLGWGDMLLPFTAGTFLY VGTVAVIPEMLETGPRKAEELRKMLVQFAAVAAGAGIMLYISWHD* |
Coding | >Hirsu2|6789 ATGGCCCCCCCAATGCGTCTTGGGCTCCTGGTGGCGGCGGCCTCTCTGCTCGTCCTGGCGGCGGCGCAGGATGCG GCGGCGGCGGCCAGCCTGAGCCTGGACGCGCTGGACGAGCAGCTCCAGACGTGTCCGATCGTGCAGCATCTCAAC GCGGCCAAGCACCGGCAGCACGCGTCGCACGCGCAGTCGCCGACGACGCGGCTCTTCGGCCTGCTCTTCCCCAGC TCGCGGCCGGCGGTCAACGCGCTGCTGGCGACGCTCTACATCTCGGGCCCGCCCAACTTCCTGCTGGCGCTGTGC CCGACCAACATCGACCCGGCGTCGCTGAGCGTCATGGTGGCCTTCGCCGTCGGCGGCCTGCTGGGCGACACCCTC TTCCACCTGCTGCCCGAGATCTTCGTGGGCGAGGACGACGACGAGCGGGCGCGCTTCGTCCTGGTCGAGCCCAAC CGCAACCTGCTGCTCGGCCTCGGCATCCTAGTCGGCTTCATGACCTTTGTCGCCATGGATAAGGGGCTGCGAATC GCTACCGGCGGCGGCTCGGGCGGCCACGACCACGGCCACGGACACGCCCACTCTCACGGGCAAGCGGAGCCGGCC AACGGGGCCGTCGCCGCCGTCAGCACGGCCACGGACCTCGATGTCGTGGGCGGCGGGCAGGCCAAAGCGCGGAAG AGGCAGGCCGGCGAGCCGACATCCAATGCCGACAAGACCAAGGAGGTGGTGGCAGTGAACCCGAGCGTGAAGCTC GGAGGCTACCTCAATCTTATCGCCGACTTCACGCACAACATTACGGACGGGCTGGCTATGTCGGCCAGCTTCTAC GCATCGCCGACGGTGGGGGCGACGACGACCATGGCCGTCTTCTTCCACGAGATCCCGCACGAGGTCGGCGACTTC GCGCTGCTGGTGCAGTCGGGCTTCTCGAAGAGGGCGGCCATGGCGTCGCAGTTCGTCACGGCCGTGGGCGCCCTG CTCGGCACGCTGATCGGCATCGCCGTGCAGGAGCTTGGCGGCGGCGGCGGCCACGAGGGCGCCGCCATGGCGCGC GACGCCGGCATCTGGGGGACGAGCTTGGGCTGGGGCGACATGCTGCTCCCATTCACGGCCGGGACGTTCCTGTAC GTCGGCACGGTGGCCGTGATCCCGGAGATGCTGGAGACGGGGCCGAGGAAGGCGGAGGAGCTGCGCAAGATGCTG GTGCAGTTTGCGGCGGTGGCGGCGGGGGCCGGCATCATGCTGTACATCTCGTGGCACGACTGA |
Transcript | >Hirsu2|6789 ATGGCCCCCCCAATGCGTCTTGGGCTCCTGGTGGCGGCGGCCTCTCTGCTCGTCCTGGCGGCGGCGCAGGATGCG GCGGCGGCGGCCAGCCTGAGCCTGGACGCGCTGGACGAGCAGCTCCAGACGTGTCCGATCGTGCAGCATCTCAAC GCGGCCAAGCACCGGCAGCACGCGTCGCACGCGCAGTCGCCGACGACGCGGCTCTTCGGCCTGCTCTTCCCCAGC TCGCGGCCGGCGGTCAACGCGCTGCTGGCGACGCTCTACATCTCGGGCCCGCCCAACTTCCTGCTGGCGCTGTGC CCGACCAACATCGACCCGGCGTCGCTGAGCGTCATGGTGGCCTTCGCCGTCGGCGGCCTGCTGGGCGACACCCTC TTCCACCTGCTGCCCGAGATCTTCGTGGGCGAGGACGACGACGAGCGGGCGCGCTTCGTCCTGGTCGAGCCCAAC CGCAACCTGCTGCTCGGCCTCGGCATCCTAGTCGGCTTCATGACCTTTGTCGCCATGGATAAGGGGCTGCGAATC GCTACCGGCGGCGGCTCGGGCGGCCACGACCACGGCCACGGACACGCCCACTCTCACGGGCAAGCGGAGCCGGCC AACGGGGCCGTCGCCGCCGTCAGCACGGCCACGGACCTCGATGTCGTGGGCGGCGGGCAGGCCAAAGCGCGGAAG AGGCAGGCCGGCGAGCCGACATCCAATGCCGACAAGACCAAGGAGGTGGTGGCAGTGAACCCGAGCGTGAAGCTC GGAGGCTACCTCAATCTTATCGCCGACTTCACGCACAACATTACGGACGGGCTGGCTATGTCGGCCAGCTTCTAC GCATCGCCGACGGTGGGGGCGACGACGACCATGGCCGTCTTCTTCCACGAGATCCCGCACGAGGTCGGCGACTTC GCGCTGCTGGTGCAGTCGGGCTTCTCGAAGAGGGCGGCCATGGCGTCGCAGTTCGTCACGGCCGTGGGCGCCCTG CTCGGCACGCTGATCGGCATCGCCGTGCAGGAGCTTGGCGGCGGCGGCGGCCACGAGGGCGCCGCCATGGCGCGC GACGCCGGCATCTGGGGGACGAGCTTGGGCTGGGGCGACATGCTGCTCCCATTCACGGCCGGGACGTTCCTGTAC GTCGGCACGGTGGCCGTGATCCCGGAGATGCTGGAGACGGGGCCGAGGAAGGCGGAGGAGCTGCGCAAGATGCTG GTGCAGTTTGCGGCGGTGGCGGCGGGGGCCGGCATCATGCTGTACATCTCGTGGCACGACTGA |
Gene | >Hirsu2|6789 ATGGCCCCCCCAATGCGTCTTGGGCTCCTGGTGGCGGCGGCCTCTCTGCTCGTCCTGGCGGCGGCGCAGGATGCG GCGGCGGCGGCCAGCCTGAGCCTGGACGCGCTGGACGAGCAGCTCCAGGTAAGGGGACCCGATTCCCGCCCGCCC GCTCCTCTTCTCCCGCTCCGTCTGTCGGTCGCTCGATGTGCCCCGGGCGAGTGGACGTGGGGGTGATGGTCCGAG GTGCCGCGGCGTTCGGGGCGTTCGGGGGCGGGCTGGCTGGCTAACCGGGGGTTCTGTTCCGTCTCAGACGTGTCC GATCGTGCAGCATCTCAACGCGGCCAAGCACCGGCAGCACGCGTCGCACGCGCAGTCGCCGACGACGCGGCTCTT CGGCCTGCTCTTCCCCAGCTCGCGGCCGGCGGTCAACGCGCTGCTGGCGACGCTCTACATCTCGGGCCCGCCCAA CTTCCTGCTGGCGCTGTGCCCGACCAACATCGACCCGGCGTCGCTGAGCGTCATGGTGGCCTTCGCCGTCGGCGG CCTGCTGGGCGACACCCTCTTCCACCTGCTGCCCGAGATCTTCGTGGGCGAGGACGACGACGAGCGGGCGCGCTT CGTCCTGGTCGAGCCCAACCGCAACCTGCTGCTCGGCCTCGGCATCCTAGTCGGCTTCATGACCTTTGTCGCCAT GGATAAGGGGCTGCGAATCGCTACCGGCGGCGGCTCGGGCGGCCACGACCACGGCCACGGACACGCCCACTCTCA CGGGCAAGCGGAGCCGGCCAACGGGGCCGTCGCCGCCGTCAGCACGGCCACGGACCTCGATGTCGTGGGCGGCGG GCAGGCCAAAGCGCGGAAGAGGCAGGCCGGCGAGCCGACATCCAATGCCGACAAGACCAAGGAGGTGGTGGCAGT GAACCCGAGCGTGAAGCTCGGAGGCTACCTCAATCTTATGTACGTCGTCGCGTCGCCTCGTCGAATCTCTTGACT TGCCGCACCGAGCGCCTCCTGCTCCCGTCGTCGGGCCGGTGGAAGCGAGCAGCGAGCAAGGCAGCAGGGAGGGTG GGGAGGAGGATAAGGGAATCTGCCTGTGCTGACGCGGCAGGGCGGCAGCGCCGACTTCACGCACAACATTACGGA CGGGCTGGCTATGTCGGCCAGCTTCTACGCATCGCCGACGGTGGGGGCGACGACGACCATGGCCGTCTTCTTCCA CGAGATCCCGCACGAGGTCGGCGACTTCGCGCTGCTGGTGCAGTCGGGCTTCTCGAAGAGGGCGGCCATGGCGTC GCAGTTCGTCACGGCCGTGGGCGCCCTGCTCGGCACGCTGATCGGCATCGCCGTGCAGGAGCTTGGCGGCGGCGG CGGCCACGAGGGCGCCGCCATGGCGCGCGACGCCGGCATCTGGGGGACGAGCTTGGTAATGTCCCCTTCTCACTC CTCCGGGCGGGACGGGTTGCTGACGGGCGACGACCGAAAAACGGTAGGGCTGGGGCGACATGCTGCTCCCATTCA CGGCCGGGACGTTCCTGTACGTCGGCACGGTGGCCGTGATCCCGGAGATGCTGGAGACGGGGCCGAGGAAGGCGG AGGAGCTGCGCAAGATGCTGGTGCAGTTTGCGGCGGTGGCGGCGGGGGCCGGCATCATGCTGTACATCTCGTGGC ACGACTGA |