© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|6780 |
| Gene name | |
| Location | Contig_361:12752..13743 |
| Strand | + |
| Gene length (bp) | 991 |
| Transcript length (bp) | 792 |
| Coding sequence length (bp) | 792 |
| Protein length (aa) | 264 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05648 | PEX11 | Peroxisomal biogenesis factor 11 (PEX11) | 1.3E-19 | 7 | 253 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016559 | peroxisome fission | Yes |
| GO:0005779 | integral component of peroxisomal membrane | Yes |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0016043 | cellular component organization | No |
| GO:0016021 | integral component of membrane | No |
| GO:0031300 | intrinsic component of organelle membrane | No |
| GO:0006996 | organelle organization | No |
| GO:0071840 | cellular component organization or biogenesis | No |
| GO:0031301 | integral component of organelle membrane | No |
| GO:0009987 | cellular process | No |
| GO:0048285 | organelle fission | No |
| GO:0005575 | cellular_component | No |
| GO:0008150 | biological_process | No |
| GO:0031231 | intrinsic component of peroxisomal membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 31 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 231 | 253 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6780 MVGVARQFVAFGTDIVGIERFLRLIQASLAILTAYPSLPLRPPAPAPALARLQTQLNLTRRTVRLFWFLDNLRAS AGGRDGWLGVLAQSAFGLFGLVESATLLDLAGAGVTLLGAREAQRLDDEAQVLWLVALCASAALSASRLLALYAY RAVPLLDQDGGDEKMLQRERDGDDDDDDDDDDMKQQKKKELEQRKAAAADAFAAEAAALATKLLADLLDTLLPAS RIGLVALGAGPVGVAMLGSTLLSGWAVWNRCGRQLRGA* |
| Coding | >Hirsu2|6780 ATGGTGGGCGTGGCCCGGCAGTTCGTCGCCTTCGGGACGGACATTGTGGGCATCGAGCGCTTCCTGCGCCTCATC CAAGCCAGCCTCGCCATCCTAACCGCCTACCCGTCGCTGCCGCTCCGGCCGCCGGCGCCGGCGCCGGCGCTGGCC CGGCTACAGACGCAGCTGAACCTGACGCGGCGCACCGTCCGCCTCTTCTGGTTCCTCGACAACCTGCGGGCCAGC GCGGGCGGCCGCGACGGCTGGCTCGGCGTGCTGGCCCAGTCGGCCTTTGGCCTCTTCGGCCTCGTCGAGTCGGCC ACGCTGCTCGACCTGGCCGGCGCCGGCGTCACGCTGCTGGGCGCGCGCGAGGCCCAGCGCCTCGACGACGAGGCC CAGGTCCTGTGGCTCGTCGCGCTGTGCGCCTCGGCCGCGCTGTCCGCCTCCCGCCTGCTGGCCCTGTATGCCTAC CGCGCCGTGCCGCTGCTGGACCAGGACGGCGGCGATGAGAAGATGCTGCAGCGGGAGAGGGACGGCGACGACGAC GACGACGACGACGACGACGATATGAAGCAGCAGAAGAAGAAGGAGCTGGAGCAGCGCAAGGCCGCAGCGGCCGAC GCCTTCGCCGCCGAGGCCGCCGCCCTCGCCACCAAGCTCCTGGCCGACCTGCTGGACACGCTGCTGCCGGCCTCG AGGATCGGCTTGGTCGCGCTCGGCGCCGGGCCCGTCGGCGTCGCCATGCTGGGCAGCACCCTGCTCAGCGGCTGG GCCGTCTGGAACCGCTGTGGGCGGCAGCTCCGGGGCGCGTGA |
| Transcript | >Hirsu2|6780 ATGGTGGGCGTGGCCCGGCAGTTCGTCGCCTTCGGGACGGACATTGTGGGCATCGAGCGCTTCCTGCGCCTCATC CAAGCCAGCCTCGCCATCCTAACCGCCTACCCGTCGCTGCCGCTCCGGCCGCCGGCGCCGGCGCCGGCGCTGGCC CGGCTACAGACGCAGCTGAACCTGACGCGGCGCACCGTCCGCCTCTTCTGGTTCCTCGACAACCTGCGGGCCAGC GCGGGCGGCCGCGACGGCTGGCTCGGCGTGCTGGCCCAGTCGGCCTTTGGCCTCTTCGGCCTCGTCGAGTCGGCC ACGCTGCTCGACCTGGCCGGCGCCGGCGTCACGCTGCTGGGCGCGCGCGAGGCCCAGCGCCTCGACGACGAGGCC CAGGTCCTGTGGCTCGTCGCGCTGTGCGCCTCGGCCGCGCTGTCCGCCTCCCGCCTGCTGGCCCTGTATGCCTAC CGCGCCGTGCCGCTGCTGGACCAGGACGGCGGCGATGAGAAGATGCTGCAGCGGGAGAGGGACGGCGACGACGAC GACGACGACGACGACGACGATATGAAGCAGCAGAAGAAGAAGGAGCTGGAGCAGCGCAAGGCCGCAGCGGCCGAC GCCTTCGCCGCCGAGGCCGCCGCCCTCGCCACCAAGCTCCTGGCCGACCTGCTGGACACGCTGCTGCCGGCCTCG AGGATCGGCTTGGTCGCGCTCGGCGCCGGGCCCGTCGGCGTCGCCATGCTGGGCAGCACCCTGCTCAGCGGCTGG GCCGTCTGGAACCGCTGTGGGCGGCAGCTCCGGGGCGCGTGA |
| Gene | >Hirsu2|6780 ATGGTGGGCGTGGCCCGGCAGTTCGTCGCCTTCGGGACGGACATTGGTATGGATCGCCCCGCTCGCGGCCCCGTC CCCGGCCCTCGCCCGTTTTGTGTCCGTTTTGGCTCGAGTGAGGGAGAAAAGATAAGGGGTTAAGAGGATGGAGAA AGGGAGAGAGGGTAGGAAGTGAGAGAGAGGGGGGGAAGGAGAGGGAGTGAGAGAGTGTGTGAGTGAGAGCATCGA GTTCTGACACTTGCGGGCAGTGGGCATCGAGCGCTTCCTGCGCCTCATCCAAGCCAGCCTCGCCATCCTAACCGC CTACCCGTCGCTGCCGCTCCGGCCGCCGGCGCCGGCGCCGGCGCTGGCCCGGCTACAGACGCAGCTGAACCTGAC GCGGCGCACCGTCCGCCTCTTCTGGTTCCTCGACAACCTGCGGGCCAGCGCGGGCGGCCGCGACGGCTGGCTCGG CGTGCTGGCCCAGTCGGCCTTTGGCCTCTTCGGCCTCGTCGAGTCGGCCACGCTGCTCGACCTGGCCGGCGCCGG CGTCACGCTGCTGGGCGCGCGCGAGGCCCAGCGCCTCGACGACGAGGCCCAGGTCCTGTGGCTCGTCGCGCTGTG CGCCTCGGCCGCGCTGTCCGCCTCCCGCCTGCTGGCCCTGTATGCCTACCGCGCCGTGCCGCTGCTGGACCAGGA CGGCGGCGATGAGAAGATGCTGCAGCGGGAGAGGGACGGCGACGACGACGACGACGACGACGACGACGATATGAA GCAGCAGAAGAAGAAGGAGCTGGAGCAGCGCAAGGCCGCAGCGGCCGACGCCTTCGCCGCCGAGGCCGCCGCCCT CGCCACCAAGCTCCTGGCCGACCTGCTGGACACGCTGCTGCCGGCCTCGAGGATCGGCTTGGTCGCGCTCGGCGC CGGGCCCGTCGGCGTCGCCATGCTGGGCAGCACCCTGCTCAGCGGCTGGGCCGTCTGGAACCGCTGTGGGCGGCA GCTCCGGGGCGCGTGA |