© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6763 |
| Gene name | |
| Location | Contig_36:49964..50775 |
| Strand | + |
| Gene length (bp) | 811 |
| Transcript length (bp) | 678 |
| Coding sequence length (bp) | 678 |
| Protein length (aa) | 226 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | 0.1056 | 0.089 | 0.8715 | 0.3774 | 0.0566 | 0.0069 | 0.2484 | 0.1345 | 0.1603 | 0.0048 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 26 | 0.980849 |
| Orthofinder run ID | 4 |
| Orthogroup | 3524 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6763 MASRGPRPATSRLAVVAFCALCRAAGAASPPAPAVTKAPIFLPYYHEEAWSVVRGSVLSSNDKAGETTYTIFCPI QTPPTCDLALDFPFVVVEGPSTLQFHGTHTSTYIANVECKLDGRTAATCSGYTSFKSGYSNGPSTGPTEVSWTST LSGPDVEWGTLTMAEKPTGADNFDVTASVNSAPTVASSVLHLPSVTGQGSGRRIHFDERLAMVAAAVVVCAAGLL * |
| Coding | >Hirsu2|6763 ATGGCCAGTCGCGGTCCGAGGCCGGCCACGTCTCGGCTGGCCGTGGTGGCCTTCTGCGCTCTGTGCCGCGCCGCC GGCGCCGCCTCGCCGCCGGCGCCCGCCGTGACCAAGGCTCCCATCTTCCTCCCCTACTACCACGAGGAGGCCTGG TCCGTCGTGCGGGGCAGCGTCCTCTCCAGCAACGACAAGGCCGGCGAGACGACTTATACCATTTTCTGCCCGATA CAGACGCCGCCGACCTGCGACCTTGCACTCGACTTTCCCTTTGTCGTCGTCGAGGGCCCGAGCACGCTGCAGTTT CACGGGACTCACACTTCGACCTACATCGCCAACGTGGAGTGCAAGCTGGACGGCAGGACGGCCGCGACCTGCTCC GGCTATACGAGTTTCAAGTCCGGCTACAGCAACGGCCCGAGCACGGGCCCGACGGAGGTGTCGTGGACCTCGACG CTGTCCGGCCCCGACGTCGAGTGGGGCACGCTCACGATGGCGGAAAAGCCGACGGGTGCGGACAACTTCGACGTG ACGGCGTCGGTCAACTCGGCGCCGACGGTGGCCTCGTCGGTCCTCCACCTGCCGTCCGTGACGGGACAGGGATCC GGCAGACGCATCCACTTCGACGAGCGGCTGGCCATGGTGGCTGCGGCCGTGGTGGTTTGCGCCGCCGGCCTCTTG TGA |
| Transcript | >Hirsu2|6763 ATGGCCAGTCGCGGTCCGAGGCCGGCCACGTCTCGGCTGGCCGTGGTGGCCTTCTGCGCTCTGTGCCGCGCCGCC GGCGCCGCCTCGCCGCCGGCGCCCGCCGTGACCAAGGCTCCCATCTTCCTCCCCTACTACCACGAGGAGGCCTGG TCCGTCGTGCGGGGCAGCGTCCTCTCCAGCAACGACAAGGCCGGCGAGACGACTTATACCATTTTCTGCCCGATA CAGACGCCGCCGACCTGCGACCTTGCACTCGACTTTCCCTTTGTCGTCGTCGAGGGCCCGAGCACGCTGCAGTTT CACGGGACTCACACTTCGACCTACATCGCCAACGTGGAGTGCAAGCTGGACGGCAGGACGGCCGCGACCTGCTCC GGCTATACGAGTTTCAAGTCCGGCTACAGCAACGGCCCGAGCACGGGCCCGACGGAGGTGTCGTGGACCTCGACG CTGTCCGGCCCCGACGTCGAGTGGGGCACGCTCACGATGGCGGAAAAGCCGACGGGTGCGGACAACTTCGACGTG ACGGCGTCGGTCAACTCGGCGCCGACGGTGGCCTCGTCGGTCCTCCACCTGCCGTCCGTGACGGGACAGGGATCC GGCAGACGCATCCACTTCGACGAGCGGCTGGCCATGGTGGCTGCGGCCGTGGTGGTTTGCGCCGCCGGCCTCTTG TGA |
| Gene | >Hirsu2|6763 ATGGCCAGTCGCGGTCCGAGGCCGGCCACGTCTCGGCTGGCCGTGGTGGCCTTCTGCGCTCTGTGCCGCGCCGCC GGCGCCGCCTCGCCGCCGGCGCCCGCCGTGACCAAGGCTCCCATCTTCCTCCCCTACTACCACGAGGAGGCCTGG TCCGTCGTGCGGGGCAGCGTCCTCTCCAGCGTATGTCGTCGTCGATGCGTCGCCGGCGCCCTCTCCGCCGGCTGC GCTCCTTTGCTGACGGGACGAACAGAACGACAAGGCCGGCGAGACGACTTATACCATTTTCTGCCCGATACAGAC GCCGCCGACCTGCGACCTTGCACTCGACTTTCCCTTTGTCGTCGTCGAGGGCCCGAGCACGCTGCAGTTTCACGG GACTCACACTTCGACCTAGTACGCTTCCCGCACGGCGGCGAACCCCCGATGGACGGAGTGCTGACGAGCTCGCGC GCATAGCATCGCCAACGTGGAGTGCAAGCTGGACGGCAGGACGGCCGCGACCTGCTCCGGCTATACGAGTTTCAA GTCCGGCTACAGCAACGGCCCGAGCACGGGCCCGACGGAGGTGTCGTGGACCTCGACGCTGTCCGGCCCCGACGT CGAGTGGGGCACGCTCACGATGGCGGAAAAGCCGACGGGTGCGGACAACTTCGACGTGACGGCGTCGGTCAACTC GGCGCCGACGGTGGCCTCGTCGGTCCTCCACCTGCCGTCCGTGACGGGACAGGGATCCGGCAGACGCATCCACTT CGACGAGCGGCTGGCCATGGTGGCTGCGGCCGTGGTGGTTTGCGCCGCCGGCCTCTTGTGA |