Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6751
Gene name
LocationContig_36:6530..7781
Strand-
Gene length (bp)1251
Transcript length (bp)1251
Coding sequence length (bp)1251
Protein length (aa) 417

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01476 LysM LysM domain 1.8E-07 117 161
PF01476 LysM LysM domain 5.5E-06 174 221

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6751
MASLRNLLLLGGSSVAFGAAVRHSRREEAPQVLKADVPFCNHTVAWEDSCWKIIQGTTVSYAELNEKNGGKLYTG
NDSSKCYLEEHQVIQVPCSYAEKKRHRQPPALPGSERCKKTYDVQKGDVVHELARQHNVDRYNLIDWNELKNDTH
PLIQIGQKLCVSIADFECAEKDLHTVVKGDDCYKIRSDPKVNITAEALERLNPNILNPGTCSIFPGQKLCLRHPK
QEADKEDLKEADKKDQKRAGKKEAETDISIDLGVYGSANVNPTVEMVAAFYKMDLDRVGNGTMAAGFKFENFKLT
VEEIEKRSRLMALVQAEKPRDSYTQALVKYEQKVIASYNGEFKVEGCNGSAGSCLITTSGPNKVKASASSDRGNS
VVELAFDVVVGRSVRSVQAQGVSVSVDVETGVPPANDDTTC*
Coding >Hirsu2|6751
ATGGCTTCCCTCAGAAACCTGCTGCTCCTCGGCGGCAGCTCCGTCGCCTTCGGGGCCGCCGTCCGCCACAGCCGT
CGCGAGGAGGCTCCTCAGGTCCTGAAAGCGGACGTCCCGTTCTGCAACCACACGGTGGCGTGGGAAGACAGCTGT
TGGAAGATCATCCAGGGCACCACCGTCTCCTATGCCGAGCTCAACGAGAAGAACGGCGGCAAGCTGTACACAGGG
AACGACTCCTCGAAATGCTACCTCGAGGAGCACCAGGTGATCCAAGTCCCCTGCAGTTACGCGGAGAAGAAGCGG
CACAGGCAACCGCCGGCTCTCCCGGGCTCGGAGAGGTGCAAGAAGACGTACGATGTCCAGAAGGGTGACGTGGTC
CACGAGCTTGCCCGGCAGCACAACGTCGACCGCTACAACCTGATCGACTGGAACGAGCTGAAGAATGATACTCAT
CCCTTGATCCAAATCGGCCAGAAGCTGTGCGTGTCGATTGCCGACTTCGAGTGCGCGGAGAAGGACCTCCACACT
GTTGTTAAAGGGGACGACTGCTACAAAATCCGCTCTGACCCCAAGGTGAACATCACCGCCGAGGCCCTGGAGCGC
CTGAACCCCAACATCCTGAACCCGGGCACCTGCAGCATTTTCCCGGGCCAGAAGTTGTGCCTCCGCCACCCTAAA
CAGGAGGCCGACAAGGAGGACCTGAAGGAGGCCGACAAGAAGGACCAGAAGCGGGCCGGCAAGAAGGAGGCCGAG
ACCGACATCAGCATCGATCTCGGCGTCTACGGCTCGGCCAACGTCAACCCCACGGTTGAAATGGTCGCCGCCTTC
TACAAAATGGACCTCGATCGTGTCGGTAACGGGACCATGGCCGCGGGTTTCAAGTTCGAAAACTTCAAGCTGACC
GTCGAGGAGATCGAGAAGAGATCCCGCTTGATGGCTTTGGTTCAGGCCGAGAAGCCCCGTGATTCCTATACGCAG
GCGCTTGTCAAGTACGAGCAGAAAGTCATCGCCAGCTACAACGGCGAGTTCAAGGTCGAGGGCTGCAACGGCTCT
GCCGGCAGCTGCCTCATCACGACCTCGGGCCCGAACAAGGTCAAGGCCTCCGCTTCTTCCGACCGCGGCAACAGC
GTGGTCGAGCTTGCCTTTGACGTCGTCGTGGGTCGCTCTGTCCGCTCTGTCCAGGCCCAGGGAGTTTCGGTCAGC
GTCGACGTCGAGACCGGAGTCCCGCCCGCCAACGATGATACCACTTGCTAG
Transcript >Hirsu2|6751
ATGGCTTCCCTCAGAAACCTGCTGCTCCTCGGCGGCAGCTCCGTCGCCTTCGGGGCCGCCGTCCGCCACAGCCGT
CGCGAGGAGGCTCCTCAGGTCCTGAAAGCGGACGTCCCGTTCTGCAACCACACGGTGGCGTGGGAAGACAGCTGT
TGGAAGATCATCCAGGGCACCACCGTCTCCTATGCCGAGCTCAACGAGAAGAACGGCGGCAAGCTGTACACAGGG
AACGACTCCTCGAAATGCTACCTCGAGGAGCACCAGGTGATCCAAGTCCCCTGCAGTTACGCGGAGAAGAAGCGG
CACAGGCAACCGCCGGCTCTCCCGGGCTCGGAGAGGTGCAAGAAGACGTACGATGTCCAGAAGGGTGACGTGGTC
CACGAGCTTGCCCGGCAGCACAACGTCGACCGCTACAACCTGATCGACTGGAACGAGCTGAAGAATGATACTCAT
CCCTTGATCCAAATCGGCCAGAAGCTGTGCGTGTCGATTGCCGACTTCGAGTGCGCGGAGAAGGACCTCCACACT
GTTGTTAAAGGGGACGACTGCTACAAAATCCGCTCTGACCCCAAGGTGAACATCACCGCCGAGGCCCTGGAGCGC
CTGAACCCCAACATCCTGAACCCGGGCACCTGCAGCATTTTCCCGGGCCAGAAGTTGTGCCTCCGCCACCCTAAA
CAGGAGGCCGACAAGGAGGACCTGAAGGAGGCCGACAAGAAGGACCAGAAGCGGGCCGGCAAGAAGGAGGCCGAG
ACCGACATCAGCATCGATCTCGGCGTCTACGGCTCGGCCAACGTCAACCCCACGGTTGAAATGGTCGCCGCCTTC
TACAAAATGGACCTCGATCGTGTCGGTAACGGGACCATGGCCGCGGGTTTCAAGTTCGAAAACTTCAAGCTGACC
GTCGAGGAGATCGAGAAGAGATCCCGCTTGATGGCTTTGGTTCAGGCCGAGAAGCCCCGTGATTCCTATACGCAG
GCGCTTGTCAAGTACGAGCAGAAAGTCATCGCCAGCTACAACGGCGAGTTCAAGGTCGAGGGCTGCAACGGCTCT
GCCGGCAGCTGCCTCATCACGACCTCGGGCCCGAACAAGGTCAAGGCCTCCGCTTCTTCCGACCGCGGCAACAGC
GTGGTCGAGCTTGCCTTTGACGTCGTCGTGGGTCGCTCTGTCCGCTCTGTCCAGGCCCAGGGAGTTTCGGTCAGC
GTCGACGTCGAGACCGGAGTCCCGCCCGCCAACGATGATACCACTTGCTAG
Gene >Hirsu2|6751
ATGGCTTCCCTCAGAAACCTGCTGCTCCTCGGCGGCAGCTCCGTCGCCTTCGGGGCCGCCGTCCGCCACAGCCGT
CGCGAGGAGGCTCCTCAGGTCCTGAAAGCGGACGTCCCGTTCTGCAACCACACGGTGGCGTGGGAAGACAGCTGT
TGGAAGATCATCCAGGGCACCACCGTCTCCTATGCCGAGCTCAACGAGAAGAACGGCGGCAAGCTGTACACAGGG
AACGACTCCTCGAAATGCTACCTCGAGGAGCACCAGGTGATCCAAGTCCCCTGCAGTTACGCGGAGAAGAAGCGG
CACAGGCAACCGCCGGCTCTCCCGGGCTCGGAGAGGTGCAAGAAGACGTACGATGTCCAGAAGGGTGACGTGGTC
CACGAGCTTGCCCGGCAGCACAACGTCGACCGCTACAACCTGATCGACTGGAACGAGCTGAAGAATGATACTCAT
CCCTTGATCCAAATCGGCCAGAAGCTGTGCGTGTCGATTGCCGACTTCGAGTGCGCGGAGAAGGACCTCCACACT
GTTGTTAAAGGGGACGACTGCTACAAAATCCGCTCTGACCCCAAGGTGAACATCACCGCCGAGGCCCTGGAGCGC
CTGAACCCCAACATCCTGAACCCGGGCACCTGCAGCATTTTCCCGGGCCAGAAGTTGTGCCTCCGCCACCCTAAA
CAGGAGGCCGACAAGGAGGACCTGAAGGAGGCCGACAAGAAGGACCAGAAGCGGGCCGGCAAGAAGGAGGCCGAG
ACCGACATCAGCATCGATCTCGGCGTCTACGGCTCGGCCAACGTCAACCCCACGGTTGAAATGGTCGCCGCCTTC
TACAAAATGGACCTCGATCGTGTCGGTAACGGGACCATGGCCGCGGGTTTCAAGTTCGAAAACTTCAAGCTGACC
GTCGAGGAGATCGAGAAGAGATCCCGCTTGATGGCTTTGGTTCAGGCCGAGAAGCCCCGTGATTCCTATACGCAG
GCGCTTGTCAAGTACGAGCAGAAAGTCATCGCCAGCTACAACGGCGAGTTCAAGGTCGAGGGCTGCAACGGCTCT
GCCGGCAGCTGCCTCATCACGACCTCGGGCCCGAACAAGGTCAAGGCCTCCGCTTCTTCCGACCGCGGCAACAGC
GTGGTCGAGCTTGCCTTTGACGTCGTCGTGGGTCGCTCTGTCCGCTCTGTCCAGGCCCAGGGAGTTTCGGTCAGC
GTCGACGTCGAGACCGGAGTCCCGCCCGCCAACGATGATACCACTTGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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