Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6750
Gene name
LocationContig_36:3529..4683
Strand+
Gene length (bp)1154
Transcript length (bp)939
Coding sequence length (bp)939
Protein length (aa) 313

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06687 SUR7 SUR7/PalI family 2.6E-23 9 287

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005886 plasma membrane Yes
GO:0044464 cell part No
GO:0016020 membrane No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 192 214 22
3 221 243 22
4 273 295 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6750
MLPPSRLVVILPLVLAFVSFVLSSITLFSGHKQGFMEDYAIVRLNTSMIGHNLVDKAKDGGAKGDEGKDGPLGRL
QSWWDDKKSDAKDKIDSAKGKVAGKIAGKIGLSQWYSLHIMDACEGSFEPDPTAPNAGLNTTNCTTSAPAHRLNL
TQILDHKLNVGRLGVGLNDLGWTDSVQDKLDILNDTLLGLFIVYVLGMGLSGLSMLLNLAALFLLGKSGAVVLAN
FMAASLAALCCIIGSVITTAAGSKAVDQINKRGARVGLAAERGSKFYIIGWITTGFMFAVTAFWLVQFLLLRRKR
AAVLKTMEKGGS*
Coding >Hirsu2|6750
ATGCTCCCGCCGTCTAGACTCGTCGTGATCCTGCCCCTGGTCCTCGCCTTCGTCAGCTTCGTCCTCTCGTCCATC
ACCCTCTTCTCCGGCCACAAGCAAGGGTTCATGGAGGACTATGCCATCGTCAGGCTGAACACGTCCATGATCGGA
CACAACCTCGTCGATAAGGCCAAGGACGGAGGCGCAAAGGGCGACGAGGGGAAAGATGGCCCACTCGGCCGCCTC
CAGAGCTGGTGGGACGACAAGAAGTCGGATGCCAAGGACAAGATCGACAGCGCCAAGGGCAAAGTCGCCGGCAAG
ATCGCCGGCAAGATCGGCCTGTCCCAGTGGTACTCGCTACACATCATGGATGCCTGCGAGGGCTCCTTCGAACCC
GACCCGACGGCGCCAAACGCCGGCCTCAACACGACCAACTGCACCACATCGGCCCCAGCTCATCGTCTCAACCTG
ACGCAGATCCTCGATCATAAGCTCAACGTGGGCCGCCTCGGCGTCGGCCTCAACGACCTCGGCTGGACCGACAGC
GTCCAGGACAAGCTCGATATCCTCAACGACACCCTGCTCGGCCTCTTCATCGTCTACGTCCTCGGCATGGGCCTC
AGCGGCCTGTCCATGCTGCTCAACCTGGCCGCCCTCTTCCTGCTCGGCAAGAGCGGAGCCGTCGTGCTGGCCAAT
TTCATGGCCGCGTCGCTTGCCGCCCTGTGTTGCATCATCGGGAGCGTCATCACCACCGCGGCCGGCTCCAAGGCC
GTGGACCAGATCAACAAGCGAGGCGCCCGGGTCGGGCTCGCCGCCGAACGCGGCTCCAAGTTTTACATCATCGGC
TGGATCACGACGGGCTTCATGTTCGCCGTCACGGCCTTTTGGCTGGTGCAGTTCCTGCTCTTGCGGCGCAAGAGG
GCGGCCGTCCTGAAGACGATGGAGAAGGGGGGCTCTTGA
Transcript >Hirsu2|6750
ATGCTCCCGCCGTCTAGACTCGTCGTGATCCTGCCCCTGGTCCTCGCCTTCGTCAGCTTCGTCCTCTCGTCCATC
ACCCTCTTCTCCGGCCACAAGCAAGGGTTCATGGAGGACTATGCCATCGTCAGGCTGAACACGTCCATGATCGGA
CACAACCTCGTCGATAAGGCCAAGGACGGAGGCGCAAAGGGCGACGAGGGGAAAGATGGCCCACTCGGCCGCCTC
CAGAGCTGGTGGGACGACAAGAAGTCGGATGCCAAGGACAAGATCGACAGCGCCAAGGGCAAAGTCGCCGGCAAG
ATCGCCGGCAAGATCGGCCTGTCCCAGTGGTACTCGCTACACATCATGGATGCCTGCGAGGGCTCCTTCGAACCC
GACCCGACGGCGCCAAACGCCGGCCTCAACACGACCAACTGCACCACATCGGCCCCAGCTCATCGTCTCAACCTG
ACGCAGATCCTCGATCATAAGCTCAACGTGGGCCGCCTCGGCGTCGGCCTCAACGACCTCGGCTGGACCGACAGC
GTCCAGGACAAGCTCGATATCCTCAACGACACCCTGCTCGGCCTCTTCATCGTCTACGTCCTCGGCATGGGCCTC
AGCGGCCTGTCCATGCTGCTCAACCTGGCCGCCCTCTTCCTGCTCGGCAAGAGCGGAGCCGTCGTGCTGGCCAAT
TTCATGGCCGCGTCGCTTGCCGCCCTGTGTTGCATCATCGGGAGCGTCATCACCACCGCGGCCGGCTCCAAGGCC
GTGGACCAGATCAACAAGCGAGGCGCCCGGGTCGGGCTCGCCGCCGAACGCGGCTCCAAGTTTTACATCATCGGC
TGGATCACGACGGGCTTCATGTTCGCCGTCACGGCCTTTTGGCTGGTGCAGTTCCTGCTCTTGCGGCGCAAGAGG
GCGGCCGTCCTGAAGACGATGGAGAAGGGGGGCTCTTGA
Gene >Hirsu2|6750
ATGCTCCCGCCGTCTAGACTCGTCGTGATCCTGCCCCTGGTCCTCGCCTTCGTCAGCTTCGTCCTCTCGTCCATC
ACCCTCTTCTCCGGCCACAAGCAAGGGTTCATGGAGGACTATGCCATCGTCAGGGTAAGCACATACAAGTACAGC
CGTCTCGGCCTCCATGCGGTTTCTCTCGCCCTTCGCAACGCAGTCTACGCCAGAAACACCGGCTGGGCGGCCGTC
GCTCTCTTCCGTCGCGTGCTAACGCCATGCCTTCCGCAGCTGAACACGTCCATGATCGGACACAACCTCGTCGAT
AAGGCCAAGGACGGAGGCGCAAAGGGCGACGAGGGGAAAGATGGCCCACTCGGCCGCCTCCAGAGCTGGTGGGAC
GACAAGAAGTCGGATGCCAAGGACAAGATCGACAGCGCCAAGGGCAAAGTCGCCGGCAAGATCGCCGGCAAGATC
GGCCTGTCCCAGTGGTACTCGCTACACATCATGGATGCCTGCGAGGGCTCCTTCGAACCCGACCCGACGGCGCCA
AACGCCGGCCTCAACACGACCAACTGCACCACATCGGCCCCAGCTCGTAAGTCGGCCCTCACCCTCCCAAGCTGG
CGCTCGAGGCCTCACTTAGCGAGACATCGGCTAATGACGCACTGCTCCCAGATCGTCTCAACCTGACGCAGATCC
TCGATCATAAGCTCAACGTGGGCCGCCTCGGCGTCGGCCTCAACGACCTCGGCTGGACCGACAGCGTCCAGGACA
AGCTCGATATCCTCAACGACACCCTGCTCGGCCTCTTCATCGTCTACGTCCTCGGCATGGGCCTCAGCGGCCTGT
CCATGCTGCTCAACCTGGCCGCCCTCTTCCTGCTCGGCAAGAGCGGAGCCGTCGTGCTGGCCAATTTCATGGCCG
CGTCGCTTGCCGCCCTGTGTTGCATCATCGGGAGCGTCATCACCACCGCGGCCGGCTCCAAGGCCGTGGACCAGA
TCAACAAGCGAGGCGCCCGGGTCGGGCTCGCCGCCGAACGCGGCTCCAAGTTTTACATCATCGGCTGGATCACGA
CGGGCTTCATGTTCGCCGTCACGGCCTTTTGGCTGGTGCAGTTCCTGCTCTTGCGGCGCAAGAGGGCGGCCGTCC
TGAAGACGATGGAGAAGGGGGGCTCTTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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