Protein ID | Hirsu2|6750 |
Gene name | |
Location | Contig_36:3529..4683 |
Strand | + |
Gene length (bp) | 1154 |
Transcript length (bp) | 939 |
Coding sequence length (bp) | 939 |
Protein length (aa) | 313 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06687 | SUR7 | SUR7/PalI family | 2.8E-23 | 9 | 287 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005886 | plasma membrane | Yes |
GO:0005575 | cellular_component | No |
GO:0016020 | membrane | No |
GO:0110165 | cellular anatomical entity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 24 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
2 | 192 | 214 | 22 |
3 | 221 | 243 | 22 |
4 | 273 | 295 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6750 MLPPSRLVVILPLVLAFVSFVLSSITLFSGHKQGFMEDYAIVRLNTSMIGHNLVDKAKDGGAKGDEGKDGPLGRL QSWWDDKKSDAKDKIDSAKGKVAGKIAGKIGLSQWYSLHIMDACEGSFEPDPTAPNAGLNTTNCTTSAPAHRLNL TQILDHKLNVGRLGVGLNDLGWTDSVQDKLDILNDTLLGLFIVYVLGMGLSGLSMLLNLAALFLLGKSGAVVLAN FMAASLAALCCIIGSVITTAAGSKAVDQINKRGARVGLAAERGSKFYIIGWITTGFMFAVTAFWLVQFLLLRRKR AAVLKTMEKGGS* |
Coding | >Hirsu2|6750 ATGCTCCCGCCGTCTAGACTCGTCGTGATCCTGCCCCTGGTCCTCGCCTTCGTCAGCTTCGTCCTCTCGTCCATC ACCCTCTTCTCCGGCCACAAGCAAGGGTTCATGGAGGACTATGCCATCGTCAGGCTGAACACGTCCATGATCGGA CACAACCTCGTCGATAAGGCCAAGGACGGAGGCGCAAAGGGCGACGAGGGGAAAGATGGCCCACTCGGCCGCCTC CAGAGCTGGTGGGACGACAAGAAGTCGGATGCCAAGGACAAGATCGACAGCGCCAAGGGCAAAGTCGCCGGCAAG ATCGCCGGCAAGATCGGCCTGTCCCAGTGGTACTCGCTACACATCATGGATGCCTGCGAGGGCTCCTTCGAACCC GACCCGACGGCGCCAAACGCCGGCCTCAACACGACCAACTGCACCACATCGGCCCCAGCTCATCGTCTCAACCTG ACGCAGATCCTCGATCATAAGCTCAACGTGGGCCGCCTCGGCGTCGGCCTCAACGACCTCGGCTGGACCGACAGC GTCCAGGACAAGCTCGATATCCTCAACGACACCCTGCTCGGCCTCTTCATCGTCTACGTCCTCGGCATGGGCCTC AGCGGCCTGTCCATGCTGCTCAACCTGGCCGCCCTCTTCCTGCTCGGCAAGAGCGGAGCCGTCGTGCTGGCCAAT TTCATGGCCGCGTCGCTTGCCGCCCTGTGTTGCATCATCGGGAGCGTCATCACCACCGCGGCCGGCTCCAAGGCC GTGGACCAGATCAACAAGCGAGGCGCCCGGGTCGGGCTCGCCGCCGAACGCGGCTCCAAGTTTTACATCATCGGC TGGATCACGACGGGCTTCATGTTCGCCGTCACGGCCTTTTGGCTGGTGCAGTTCCTGCTCTTGCGGCGCAAGAGG GCGGCCGTCCTGAAGACGATGGAGAAGGGGGGCTCTTGA |
Transcript | >Hirsu2|6750 ATGCTCCCGCCGTCTAGACTCGTCGTGATCCTGCCCCTGGTCCTCGCCTTCGTCAGCTTCGTCCTCTCGTCCATC ACCCTCTTCTCCGGCCACAAGCAAGGGTTCATGGAGGACTATGCCATCGTCAGGCTGAACACGTCCATGATCGGA CACAACCTCGTCGATAAGGCCAAGGACGGAGGCGCAAAGGGCGACGAGGGGAAAGATGGCCCACTCGGCCGCCTC CAGAGCTGGTGGGACGACAAGAAGTCGGATGCCAAGGACAAGATCGACAGCGCCAAGGGCAAAGTCGCCGGCAAG ATCGCCGGCAAGATCGGCCTGTCCCAGTGGTACTCGCTACACATCATGGATGCCTGCGAGGGCTCCTTCGAACCC GACCCGACGGCGCCAAACGCCGGCCTCAACACGACCAACTGCACCACATCGGCCCCAGCTCATCGTCTCAACCTG ACGCAGATCCTCGATCATAAGCTCAACGTGGGCCGCCTCGGCGTCGGCCTCAACGACCTCGGCTGGACCGACAGC GTCCAGGACAAGCTCGATATCCTCAACGACACCCTGCTCGGCCTCTTCATCGTCTACGTCCTCGGCATGGGCCTC AGCGGCCTGTCCATGCTGCTCAACCTGGCCGCCCTCTTCCTGCTCGGCAAGAGCGGAGCCGTCGTGCTGGCCAAT TTCATGGCCGCGTCGCTTGCCGCCCTGTGTTGCATCATCGGGAGCGTCATCACCACCGCGGCCGGCTCCAAGGCC GTGGACCAGATCAACAAGCGAGGCGCCCGGGTCGGGCTCGCCGCCGAACGCGGCTCCAAGTTTTACATCATCGGC TGGATCACGACGGGCTTCATGTTCGCCGTCACGGCCTTTTGGCTGGTGCAGTTCCTGCTCTTGCGGCGCAAGAGG GCGGCCGTCCTGAAGACGATGGAGAAGGGGGGCTCTTGA |
Gene | >Hirsu2|6750 ATGCTCCCGCCGTCTAGACTCGTCGTGATCCTGCCCCTGGTCCTCGCCTTCGTCAGCTTCGTCCTCTCGTCCATC ACCCTCTTCTCCGGCCACAAGCAAGGGTTCATGGAGGACTATGCCATCGTCAGGGTAAGCACATACAAGTACAGC CGTCTCGGCCTCCATGCGGTTTCTCTCGCCCTTCGCAACGCAGTCTACGCCAGAAACACCGGCTGGGCGGCCGTC GCTCTCTTCCGTCGCGTGCTAACGCCATGCCTTCCGCAGCTGAACACGTCCATGATCGGACACAACCTCGTCGAT AAGGCCAAGGACGGAGGCGCAAAGGGCGACGAGGGGAAAGATGGCCCACTCGGCCGCCTCCAGAGCTGGTGGGAC GACAAGAAGTCGGATGCCAAGGACAAGATCGACAGCGCCAAGGGCAAAGTCGCCGGCAAGATCGCCGGCAAGATC GGCCTGTCCCAGTGGTACTCGCTACACATCATGGATGCCTGCGAGGGCTCCTTCGAACCCGACCCGACGGCGCCA AACGCCGGCCTCAACACGACCAACTGCACCACATCGGCCCCAGCTCGTAAGTCGGCCCTCACCCTCCCAAGCTGG CGCTCGAGGCCTCACTTAGCGAGACATCGGCTAATGACGCACTGCTCCCAGATCGTCTCAACCTGACGCAGATCC TCGATCATAAGCTCAACGTGGGCCGCCTCGGCGTCGGCCTCAACGACCTCGGCTGGACCGACAGCGTCCAGGACA AGCTCGATATCCTCAACGACACCCTGCTCGGCCTCTTCATCGTCTACGTCCTCGGCATGGGCCTCAGCGGCCTGT CCATGCTGCTCAACCTGGCCGCCCTCTTCCTGCTCGGCAAGAGCGGAGCCGTCGTGCTGGCCAATTTCATGGCCG CGTCGCTTGCCGCCCTGTGTTGCATCATCGGGAGCGTCATCACCACCGCGGCCGGCTCCAAGGCCGTGGACCAGA TCAACAAGCGAGGCGCCCGGGTCGGGCTCGCCGCCGAACGCGGCTCCAAGTTTTACATCATCGGCTGGATCACGA CGGGCTTCATGTTCGCCGTCACGGCCTTTTGGCTGGTGCAGTTCCTGCTCTTGCGGCGCAAGAGGGCGGCCGTCC TGAAGACGATGGAGAAGGGGGGCTCTTGA |