© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6749 |
| Gene name | |
| Location | Contig_359:19020..21609 |
| Strand | + |
| Gene length (bp) | 2589 |
| Transcript length (bp) | 2211 |
| Coding sequence length (bp) | 2211 |
| Protein length (aa) | 737 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07034 | ORC3_N | Origin recognition complex (ORC) subunit 3 N-terminus | 1.9E-37 | 58 | 347 |
| PF18137 | ORC_WH_C | Origin recognition complex winged helix C-terminal | 1.5E-31 | 612 | 735 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9JK30|ORC3_MOUSE | Origin recognition complex subunit 3 OS=Mus musculus GN=Orc3 PE=1 SV=1 | 50 | 735 | 9.0E-38 |
| sp|Q9UBD5|ORC3_HUMAN | Origin recognition complex subunit 3 OS=Homo sapiens GN=ORC3 PE=1 SV=1 | 19 | 735 | 5.0E-37 |
| sp|Q5DJU3|ORC3_SPECI | Origin recognition complex subunit 3 OS=Spermophilus citellus GN=ORC3 PE=2 SV=1 | 64 | 735 | 2.0E-36 |
| sp|Q32PJ3|ORC3_BOVIN | Origin recognition complex subunit 3 OS=Bos taurus GN=ORC3 PE=2 SV=1 | 64 | 735 | 1.0E-35 |
| sp|Q4R180|ORC3_RAT | Origin recognition complex subunit 3 OS=Rattus norvegicus GN=Orc3 PE=2 SV=1 | 19 | 735 | 7.0E-34 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9JK30|ORC3_MOUSE | Origin recognition complex subunit 3 OS=Mus musculus GN=Orc3 PE=1 SV=1 | 50 | 735 | 9.0E-38 |
| sp|Q9UBD5|ORC3_HUMAN | Origin recognition complex subunit 3 OS=Homo sapiens GN=ORC3 PE=1 SV=1 | 19 | 735 | 5.0E-37 |
| sp|Q5DJU3|ORC3_SPECI | Origin recognition complex subunit 3 OS=Spermophilus citellus GN=ORC3 PE=2 SV=1 | 64 | 735 | 2.0E-36 |
| sp|Q32PJ3|ORC3_BOVIN | Origin recognition complex subunit 3 OS=Bos taurus GN=ORC3 PE=2 SV=1 | 64 | 735 | 1.0E-35 |
| sp|Q4R180|ORC3_RAT | Origin recognition complex subunit 3 OS=Rattus norvegicus GN=Orc3 PE=2 SV=1 | 19 | 735 | 7.0E-34 |
| sp|Q10067|ORC3_SCHPO | Origin recognition complex subunit 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=orc3 PE=1 SV=2 | 41 | 735 | 2.0E-23 |
| sp|Q6E7H0|ORC3_ARATH | Origin of replication complex subunit 3 OS=Arabidopsis thaliana GN=ORC3 PE=1 SV=1 | 549 | 735 | 5.0E-11 |
| sp|Q0IY07|ORC3_ORYSJ | Origin of replication complex subunit 3 OS=Oryza sativa subsp. japonica GN=ORC3 PE=2 SV=1 | 529 | 733 | 4.0E-09 |
| sp|Q0IY07|ORC3_ORYSJ | Origin of replication complex subunit 3 OS=Oryza sativa subsp. japonica GN=ORC3 PE=2 SV=1 | 72 | 347 | 7.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003677 | DNA binding | Yes |
| GO:0005664 | nuclear origin of replication recognition complex | Yes |
| GO:0006260 | DNA replication | Yes |
| GO:0008152 | metabolic process | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0006259 | DNA metabolic process | No |
| GO:0003676 | nucleic acid binding | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0044428 | nuclear part | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0005488 | binding | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0000808 | origin recognition complex | No |
| GO:0008150 | biological_process | No |
| GO:0044260 | cellular macromolecule metabolic process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0044422 | organelle part | No |
| GO:0005575 | cellular_component | No |
| GO:0090304 | nucleic acid metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0032991 | protein-containing complex | No |
| GO:0044424 | intracellular part | No |
| GO:0034645 | cellular macromolecule biosynthetic process | No |
| GO:0009059 | macromolecule biosynthetic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0044427 | chromosomal part | No |
| GO:0044454 | nuclear chromosome part | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0044464 | cell part | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0044446 | intracellular organelle part | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 48 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6749 MGVEDDSHVVFSQEDHQVAYIFNPDEDEVRGERPSKRRRVSKEAKRTEAPADEAGSLFVPLLNGAEKAECVRLRQ QLFEESWARIDGRIQSILRESNRSTLDQVSAFVTAAEMQCARQIPAAFIITGPNLASQDLLFEQLSETLRQSFAS KLVRLRSSEAATLKAALKKTIRDATASDAAEEEDGGAHVRPGQDGQRYLDYDLEALEACLEGEKCKHVFVAFQDS EGFESGLISDLITLFHSWRPRIPFTLLFGIATSVELLQARLLKSACRLVYGAQFDCVQTETILEAVFRAAVAADD VPLRLGAPLLRSMLDRQREQIAGIQAFISSLKYAYMCHFYANPLSILLSSDALAGKAMQAEHVEALRNLASFRDH VERAIEAGGKESLAHARALIEDDGYLLSKAGETERRRREWSGKMLRSILVAEAATAGEQGGRAFSEAYLRAAAGA ATEQAKLVELIRRKSADELSAFVGRVIELLRDGDDSLRLGGSGEDEEAAELQRGLERQLAEVDGLRAAASSGGFR LQSRYSGKSKVMRTTVIAQRVQLSRDSAALRDEDRRLTEAVDRVGEMLTRQAGRAGGPESVLFWESWLYESRSPL REVLVPRPRGVFERSLARPHDYLGCSCCGGSGSGSNGDPGMRATLPATCILYRLYLETGSLINVADLWSAFQGVV KGQGEEKKRQQQQQQREEAEEEEEERASLVQFYRGLAELRALGFVKGSRKKTDHIAKVKWL* |
| Coding | >Hirsu2|6749 ATGGGTGTCGAAGATGACTCTCACGTCGTGTTTTCCCAGGAAGACCACCAGGTGGCCTACATCTTCAACCCCGAC GAGGACGAGGTTCGCGGCGAGCGCCCGTCGAAGCGGCGCAGGGTGTCGAAGGAAGCCAAGAGAACGGAGGCGCCG GCTGACGAGGCCGGATCGCTGTTCGTCCCGCTGCTCAACGGGGCGGAGAAGGCGGAATGCGTGCGGCTGCGACAG CAGCTTTTCGAAGAGAGCTGGGCGCGAATCGATGGCCGCATACAGAGTATCTTGCGCGAATCCAATCGGTCTACA CTGGACCAGGTCTCGGCATTTGTGACCGCGGCAGAGATGCAATGCGCGCGCCAAATCCCGGCGGCGTTCATCATC ACGGGACCGAACCTTGCGTCGCAAGACCTGCTGTTCGAGCAGCTATCGGAGACGCTTCGGCAGTCGTTCGCCAGC AAGCTGGTGCGGCTGAGGTCTTCGGAGGCGGCGACGCTCAAGGCGGCTCTCAAGAAGACTATCCGAGACGCGACG GCGAGCGACGCGGCCGAGGAGGAGGATGGAGGGGCACATGTGCGCCCCGGGCAGGATGGGCAGCGTTACCTCGAC TACGACCTAGAGGCTCTCGAGGCGTGCCTAGAGGGGGAAAAGTGCAAGCATGTCTTCGTCGCCTTCCAAGACAGC GAAGGCTTTGAAAGCGGGCTGATTTCTGATCTAATAACCCTATTCCATTCCTGGCGGCCTCGGATCCCCTTCACG CTCCTCTTTGGCATCGCCACCTCGGTCGAGCTCCTGCAAGCTCGGCTGTTGAAGTCGGCGTGCCGTCTCGTCTAC GGCGCGCAGTTCGACTGCGTGCAGACGGAGACGATCCTGGAGGCCGTGTTCCGAGCAGCGGTGGCGGCTGACGAC GTGCCGCTTCGGCTGGGAGCGCCGCTGCTCCGGAGCATGCTGGACCGACAGCGCGAGCAGATTGCCGGCATCCAG GCCTTCATCAGCTCACTGAAGTACGCATACATGTGTCACTTCTACGCCAACCCGCTCAGCATCTTGCTGTCGTCG GACGCCCTCGCAGGCAAGGCGATGCAAGCCGAGCACGTCGAGGCGCTACGCAACCTGGCATCGTTCCGCGATCAC GTGGAGCGAGCGATCGAGGCGGGCGGCAAGGAATCGCTGGCGCACGCCAGGGCACTAATCGAGGACGACGGCTAC CTGCTCAGCAAAGCGGGGGAGACGGAGCGGCGGCGGCGGGAATGGAGCGGCAAGATGCTACGGTCGATCCTGGTG GCGGAGGCGGCAACGGCAGGCGAGCAGGGCGGCCGGGCATTCTCCGAGGCCTATCTGCGCGCGGCGGCCGGGGCG GCGACGGAGCAGGCCAAGCTGGTGGAGCTGATCCGACGGAAGAGCGCGGACGAGCTGTCCGCCTTTGTCGGCCGC GTCATCGAGCTGTTGAGGGACGGAGACGACAGCCTCAGGCTGGGCGGGTCGGGCGAGGACGAGGAGGCGGCGGAG CTGCAGAGGGGCCTGGAGAGGCAGCTGGCCGAGGTGGACGGGCTCCGGGCGGCGGCGTCGTCGGGGGGCTTCCGG CTGCAGAGCCGGTACAGCGGGAAGAGCAAGGTGATGCGGACGACGGTGATTGCGCAGCGGGTGCAGCTGAGCCGG GACTCGGCGGCGCTCCGGGACGAGGACAGGCGTCTGACGGAGGCGGTGGACCGGGTGGGCGAGATGCTCACGCGG CAGGCGGGCCGGGCGGGCGGGCCGGAGAGCGTCCTGTTCTGGGAGAGCTGGCTCTACGAGTCGCGGTCGCCGCTG CGCGAGGTGTTGGTGCCACGGCCACGGGGGGTGTTTGAACGAAGCCTGGCTCGGCCGCACGACTACCTGGGCTGC TCGTGCTGCGGGGGCTCGGGCTCGGGCTCGAACGGGGACCCGGGGATGCGGGCGACGCTGCCGGCGACGTGCATC CTGTACCGGCTATACCTCGAGACGGGCAGCCTGATCAACGTGGCGGACCTGTGGTCGGCCTTCCAGGGGGTGGTC AAGGGGCAGGGCGAGGAGAAGAAGAGGCAGCAGCAGCAGCAGCAGCGGGAGGAGGCAGAGGAGGAGGAAGAGGAG CGGGCGAGTCTGGTGCAGTTCTACCGGGGCCTGGCCGAGCTGCGGGCGTTGGGCTTCGTCAAGGGCAGCAGGAAG AAGACGGATCACATCGCCAAGGTGAAATGGCTATGA |
| Transcript | >Hirsu2|6749 ATGGGTGTCGAAGATGACTCTCACGTCGTGTTTTCCCAGGAAGACCACCAGGTGGCCTACATCTTCAACCCCGAC GAGGACGAGGTTCGCGGCGAGCGCCCGTCGAAGCGGCGCAGGGTGTCGAAGGAAGCCAAGAGAACGGAGGCGCCG GCTGACGAGGCCGGATCGCTGTTCGTCCCGCTGCTCAACGGGGCGGAGAAGGCGGAATGCGTGCGGCTGCGACAG CAGCTTTTCGAAGAGAGCTGGGCGCGAATCGATGGCCGCATACAGAGTATCTTGCGCGAATCCAATCGGTCTACA CTGGACCAGGTCTCGGCATTTGTGACCGCGGCAGAGATGCAATGCGCGCGCCAAATCCCGGCGGCGTTCATCATC ACGGGACCGAACCTTGCGTCGCAAGACCTGCTGTTCGAGCAGCTATCGGAGACGCTTCGGCAGTCGTTCGCCAGC AAGCTGGTGCGGCTGAGGTCTTCGGAGGCGGCGACGCTCAAGGCGGCTCTCAAGAAGACTATCCGAGACGCGACG GCGAGCGACGCGGCCGAGGAGGAGGATGGAGGGGCACATGTGCGCCCCGGGCAGGATGGGCAGCGTTACCTCGAC TACGACCTAGAGGCTCTCGAGGCGTGCCTAGAGGGGGAAAAGTGCAAGCATGTCTTCGTCGCCTTCCAAGACAGC GAAGGCTTTGAAAGCGGGCTGATTTCTGATCTAATAACCCTATTCCATTCCTGGCGGCCTCGGATCCCCTTCACG CTCCTCTTTGGCATCGCCACCTCGGTCGAGCTCCTGCAAGCTCGGCTGTTGAAGTCGGCGTGCCGTCTCGTCTAC GGCGCGCAGTTCGACTGCGTGCAGACGGAGACGATCCTGGAGGCCGTGTTCCGAGCAGCGGTGGCGGCTGACGAC GTGCCGCTTCGGCTGGGAGCGCCGCTGCTCCGGAGCATGCTGGACCGACAGCGCGAGCAGATTGCCGGCATCCAG GCCTTCATCAGCTCACTGAAGTACGCATACATGTGTCACTTCTACGCCAACCCGCTCAGCATCTTGCTGTCGTCG GACGCCCTCGCAGGCAAGGCGATGCAAGCCGAGCACGTCGAGGCGCTACGCAACCTGGCATCGTTCCGCGATCAC GTGGAGCGAGCGATCGAGGCGGGCGGCAAGGAATCGCTGGCGCACGCCAGGGCACTAATCGAGGACGACGGCTAC CTGCTCAGCAAAGCGGGGGAGACGGAGCGGCGGCGGCGGGAATGGAGCGGCAAGATGCTACGGTCGATCCTGGTG GCGGAGGCGGCAACGGCAGGCGAGCAGGGCGGCCGGGCATTCTCCGAGGCCTATCTGCGCGCGGCGGCCGGGGCG GCGACGGAGCAGGCCAAGCTGGTGGAGCTGATCCGACGGAAGAGCGCGGACGAGCTGTCCGCCTTTGTCGGCCGC GTCATCGAGCTGTTGAGGGACGGAGACGACAGCCTCAGGCTGGGCGGGTCGGGCGAGGACGAGGAGGCGGCGGAG CTGCAGAGGGGCCTGGAGAGGCAGCTGGCCGAGGTGGACGGGCTCCGGGCGGCGGCGTCGTCGGGGGGCTTCCGG CTGCAGAGCCGGTACAGCGGGAAGAGCAAGGTGATGCGGACGACGGTGATTGCGCAGCGGGTGCAGCTGAGCCGG GACTCGGCGGCGCTCCGGGACGAGGACAGGCGTCTGACGGAGGCGGTGGACCGGGTGGGCGAGATGCTCACGCGG CAGGCGGGCCGGGCGGGCGGGCCGGAGAGCGTCCTGTTCTGGGAGAGCTGGCTCTACGAGTCGCGGTCGCCGCTG CGCGAGGTGTTGGTGCCACGGCCACGGGGGGTGTTTGAACGAAGCCTGGCTCGGCCGCACGACTACCTGGGCTGC TCGTGCTGCGGGGGCTCGGGCTCGGGCTCGAACGGGGACCCGGGGATGCGGGCGACGCTGCCGGCGACGTGCATC CTGTACCGGCTATACCTCGAGACGGGCAGCCTGATCAACGTGGCGGACCTGTGGTCGGCCTTCCAGGGGGTGGTC AAGGGGCAGGGCGAGGAGAAGAAGAGGCAGCAGCAGCAGCAGCAGCGGGAGGAGGCAGAGGAGGAGGAAGAGGAG CGGGCGAGTCTGGTGCAGTTCTACCGGGGCCTGGCCGAGCTGCGGGCGTTGGGCTTCGTCAAGGGCAGCAGGAAG AAGACGGATCACATCGCCAAGGTGAAATGGCTATGA |
| Gene | >Hirsu2|6749 ATGGGTGTCGAAGATGACTCTCACGTCGTGTTTTCCCAGGAAGACCACCAGGTAGGCTGCGTCCTGTTCCGAGCC CCAGACTGCGTTGCTGACGAAGGAAGAAAAAGGTGGCCTACATCTTCAACCCCGACGAGGACGAGGTTCGCGGCG AGCGCCCGTCGAAGCGGCGCAGGGTGTCGAAGGAAGCCAAGAGAACGGAGGCGCCGGCTGACGAGGCCGGATCGC TGTTCGTCCCGCTGCTCAACGGGGCGGAGAAGGCGGAATGCGTGCGGCTGCGACAGCAGCTTTTCGAAGAGAGCT GGGCGCGAATCGATGGCCGCATACAGGTAGGCAGTCTTCCTGCTCGCTTGCCTCGGCTCTGCGAGCGGCTGGCCG TCTGACCTCTTGCCCCAGAGTATCTTGCGCGAATCCAATCGGTCTACACTGGACCAGGTCTCGGCATTTGTGACC GCGGCAGAGATGCAATGGTAAGCGCCCTCGTGGTGTGCAGACGAGTGAGGAGTAGGAGTAGGCTGAGTCGAACCG GACGAGCCATCAGCGCGCGCCAAATCCCGGCGGCGTTCATCATCACGGGACCGAACCTTGCGTCGCAAGACCTGC TGTTCGAGCAGCTATCGGAGACGCTTCGGCAGTCGTTCGCCAGCAAGCTGGTGCGGCTGAGGTCTTCGGAGGCGG CGACGCTCAAGGCGGCTCTCAAGAAGACTATCCGAGACGCGACGGCGAGCGACGCGGCCGAGGAGGAGGATGGAG GGGCACATGTGCGCCCCGGGCAGGATGTGGGTTTTTTTGGTCGCTCGCCTCACGCAAACTCCGTCGTTGGCACTG ACGCTCAGCTTGGCTCCCAGGGGCAGCGTTACCTCGACTACGACCTAGAGGCTCTCGAGGCGTGCCTAGAGGGGG AAAAGTGCAAGCATGTCTTCGTCGCCTTCCAAGACAGCGAAGGCTTTGAAAGCGGGCTGATTTCTGATCTAATAA CCCTATTCCAGTATGCGCTCCCTCGGTCCCCCCGCTCGCGAGGCTGGATGTGCTTGTTGACGCATGACAGTTCCT GGCGGCCTCGGATCCCCTTCACGCTCCTCTTTGGCATCGCCACCTCGGTCGAGCTCCTGCAAGCTCGGCTGTTGA AGTCGGCGTGCCGTCTCGTCTACGGCGCGCAGTTCGACTGCGTGCAGACGGAGACGATCCTGGAGGCCGTGTTCC GAGCAGCGGTGGCGGCTGACGACGTGCCGCTTCGGCTGGGAGCGCCGCTGCTCCGGAGCATGCTGGACCGACAGC GCGAGCAGATTGCCGGCATCCAGGCCTTCATCAGCTCACTGAAGGTAGGAGGCGAGTCGGGCGAGTGAGTTGGTG GGCCGAGCTGATGGAAAAGCGCAGTACGCATACATGTGTCACTTCTACGCCAACCCGCTCAGCATCTTGCTGTCG TCGGACGCCCTCGCAGGCAAGGCGATGCAAGCCGAGCACGTCGAGGCGCTACGCAACCTGGCATCGTTCCGCGAT CACGTGGAGCGAGCGATCGAGGCGGGCGGCAAGGAATCGCTGGCGCACGCCAGGGCACTAATCGAGGACGACGGC TACCTGCTCAGCAAAGCGGGGGAGACGGAGCGGCGGCGGCGGGAATGGAGCGGCAAGATGCTACGGTCGATCCTG GTGGCGGAGGCGGCAACGGCAGGCGAGCAGGGCGGCCGGGCATTCTCCGAGGCCTATCTGCGCGCGGCGGCCGGG GCGGCGACGGAGCAGGCCAAGCTGGTGGAGCTGATCCGACGGAAGAGCGCGGACGAGCTGTCCGCCTTTGTCGGC CGCGTCATCGAGCTGTTGAGGGACGGAGACGACAGCCTCAGGCTGGGCGGGTCGGGCGAGGACGAGGAGGCGGCG GAGCTGCAGAGGGGCCTGGAGAGGCAGCTGGCCGAGGTGGACGGGCTCCGGGCGGCGGCGTCGTCGGGGGGCTTC CGGCTGCAGAGCCGGTACAGCGGGAAGAGCAAGGTGATGCGGACGACGGTGATTGCGCAGCGGGTGCAGCTGAGC CGGGACTCGGCGGCGCTCCGGGACGAGGACAGGCGTCTGACGGAGGCGGTGGACCGGGTGGGCGAGATGCTCACG CGGCAGGCGGGCCGGGCGGGCGGGCCGGAGAGCGTCCTGTTCTGGGAGAGCTGGCTCTACGAGTCGCGGTCGCCG CTGCGCGAGGTGTTGGTGCCACGGCCACGGGGGGTGTTTGAACGAAGCCTGGCTCGGCCGCACGACTACCTGGGC TGCTCGTGCTGCGGGGGCTCGGGCTCGGGCTCGAACGGGGACCCGGGGATGCGGGCGACGCTGCCGGCGACGTGC ATCCTGTACCGGCTATACCTCGAGACGGGCAGCCTGATCAACGTGGCGGACCTGTGGTCGGCCTTCCAGGGGGTG GTCAAGGGGCAGGGCGAGGAGAAGAAGAGGCAGCAGCAGCAGCAGCAGCGGGAGGAGGCAGAGGAGGAGGAAGAG GAGCGGGCGAGTCTGGTGCAGTTCTACCGGGGCCTGGCCGAGCTGCGGGCGTTGGGCTTCGTCAAGGGCAGCAGG AAGAAGACGGATCACATCGCCAAGGTGAAATGGCTATGA |