Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6748
Gene name
LocationContig_359:15861..18123
Strand+
Gene length (bp)2262
Transcript length (bp)1815
Coding sequence length (bp)1815
Protein length (aa) 605

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00855 PWWP PWWP domain 4.2E-15 144 251

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O94312|PDP2_SCHPO PWWP domain-containing protein2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pdp2 PE=1 SV=1 394 486 2.0E-09
sp|Q09842|PDP3_SCHPO PWWP domain-containing protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pdp3 PE=1 SV=1 142 513 7.0E-09
sp|O59676|PDP1_SCHPO PWWP domain-containing protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pdp1 PE=1 SV=1 399 486 3.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 50 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6748
MADKPNESPEATAPVADADQASAPGAQKDELESDKEPSKPEGEGAKESPKKSVEAEENGQDTADNATEEVAKDQE
KPAADADTEMKDAAEDAAPEPESAPAPPPAEVPATKARGGRRKSAAGEAKGKALNKKGSKARLTHIGAKPGDHFL
VKLKGFPAWPAIICDETMLPAALISSRPVSAARPDGSYSEAYADGGKRVHDRSFPVMYLYTNEFGWVQNTALSEL
TADRARDTITEKMRKDLRAAFELAVEHHPVEHYKQILKNFQEEQIAQEEAKKQAAATPKKPKKGKAKAVDEDEDV
DMEDVDAAPKSAKTKKRKAEDESNAPQRPESVKKPKIKLNTSSTPKTANGAATPKSAGGSTAKATKAKPKKAKEG
GEKKAEAPKEVKMTPEERHQRKEKEVLYLRHKLQRGLLTREQQPREDEMKSMSDFISVLESFVDLEVSIIRATKI
NKVLKAILKLESIPKEEEFQFKKRSQSLLDKWNKLLAGDASGPPSASTNGINGASEEKKTEANGVKDEAGEVSKA
EPEKADESKADESKADEPKTDEPKADEPKADEPKADEPKADDKADEEKSDDKPSTPQEEEEERPASAAGTASDVV
AAEN*
Coding >Hirsu2|6748
ATGGCCGACAAGCCCAACGAGAGCCCCGAAGCGACCGCGCCCGTCGCCGACGCCGATCAAGCTTCCGCCCCCGGC
GCTCAGAAGGACGAGCTGGAGTCGGACAAGGAGCCGTCCAAGCCCGAGGGGGAGGGCGCCAAGGAGAGCCCGAAG
AAATCTGTCGAAGCGGAGGAGAACGGGCAGGACACGGCCGACAACGCGACCGAAGAAGTTGCCAAGGATCAGGAA
AAGCCTGCTGCCGATGCCGATACTGAGATGAAGGACGCCGCCGAAGACGCGGCGCCCGAACCCGAGTCGGCACCG
GCACCCCCCCCGGCCGAGGTGCCCGCCACCAAGGCCAGGGGAGGCCGCCGCAAGTCGGCCGCCGGCGAGGCCAAG
GGCAAGGCCCTGAACAAGAAAGGATCAAAGGCGCGCCTCACCCACATTGGTGCCAAGCCCGGCGATCATTTCCTG
GTGAAGCTCAAAGGCTTCCCCGCCTGGCCGGCCATCATCTGCGACGAGACGATGCTCCCCGCCGCTCTCATCAGC
AGCCGCCCCGTCTCTGCCGCCCGCCCGGACGGAAGCTACTCGGAGGCCTATGCCGACGGAGGCAAGCGAGTGCAT
GACAGAAGCTTTCCTGTCATGTACCTGTATACCAACGAATTCGGCTGGGTTCAGAACACTGCGCTGTCCGAGCTC
ACGGCGGACAGGGCCAGAGACACCATTACCGAGAAGATGCGCAAGGACTTGAGGGCTGCATTCGAGCTCGCCGTC
GAGCACCACCCCGTGGAGCACTACAAGCAGATTCTGAAAAACTTCCAGGAGGAGCAAATCGCCCAGGAAGAGGCC
AAGAAGCAAGCCGCCGCGACCCCCAAGAAGCCCAAGAAGGGCAAGGCCAAGGCGGTGGACGAGGATGAAGATGTC
GACATGGAGGATGTCGACGCGGCCCCCAAGTCGGCCAAGACCAAGAAGCGCAAGGCCGAGGACGAGAGCAACGCT
CCTCAACGACCCGAGTCCGTCAAGAAACCCAAGATCAAGTTGAACACGTCCTCTACCCCGAAGACGGCGAACGGT
GCGGCCACACCGAAATCTGCCGGCGGCTCCACGGCCAAGGCCACCAAGGCAAAGCCGAAAAAGGCCAAGGAGGGT
GGTGAGAAGAAGGCAGAGGCCCCCAAGGAGGTCAAGATGACGCCGGAGGAGCGTCACCAGCGCAAAGAGAAAGAA
GTCCTGTACCTCCGCCACAAGCTCCAGCGGGGCCTCCTGACCCGGGAACAGCAGCCGCGGGAAGACGAGATGAAG
TCCATGTCCGACTTCATCTCGGTGCTCGAGAGCTTTGTCGACCTCGAGGTCTCCATCATCCGCGCGACCAAAATC
AACAAGGTGCTCAAGGCCATTCTCAAGCTCGAATCGATCCCCAAGGAAGAGGAGTTTCAGTTCAAGAAGAGGTCC
CAGTCGCTGCTGGACAAGTGGAACAAGCTGCTTGCGGGCGACGCGTCGGGACCGCCGTCCGCCTCGACCAACGGA
ATCAACGGCGCAAGCGAGGAGAAGAAGACGGAGGCCAACGGCGTCAAGGACGAGGCTGGCGAGGTGAGCAAGGCC
GAGCCCGAGAAGGCCGACGAGTCCAAGGCCGACGAGTCCAAGGCCGACGAGCCCAAGACCGACGAGCCCAAGGCC
GACGAGCCCAAGGCCGACGAGCCCAAGGCCGACGAGCCCAAGGCCGACGACAAGGCCGACGAGGAGAAGTCGGAC
GACAAGCCGAGCACTCCGCAGGAAGAGGAAGAGGAGAGGCCGGCATCTGCGGCGGGAACTGCGTCCGATGTCGTC
GCGGCCGAAAATTGA
Transcript >Hirsu2|6748
ATGGCCGACAAGCCCAACGAGAGCCCCGAAGCGACCGCGCCCGTCGCCGACGCCGATCAAGCTTCCGCCCCCGGC
GCTCAGAAGGACGAGCTGGAGTCGGACAAGGAGCCGTCCAAGCCCGAGGGGGAGGGCGCCAAGGAGAGCCCGAAG
AAATCTGTCGAAGCGGAGGAGAACGGGCAGGACACGGCCGACAACGCGACCGAAGAAGTTGCCAAGGATCAGGAA
AAGCCTGCTGCCGATGCCGATACTGAGATGAAGGACGCCGCCGAAGACGCGGCGCCCGAACCCGAGTCGGCACCG
GCACCCCCCCCGGCCGAGGTGCCCGCCACCAAGGCCAGGGGAGGCCGCCGCAAGTCGGCCGCCGGCGAGGCCAAG
GGCAAGGCCCTGAACAAGAAAGGATCAAAGGCGCGCCTCACCCACATTGGTGCCAAGCCCGGCGATCATTTCCTG
GTGAAGCTCAAAGGCTTCCCCGCCTGGCCGGCCATCATCTGCGACGAGACGATGCTCCCCGCCGCTCTCATCAGC
AGCCGCCCCGTCTCTGCCGCCCGCCCGGACGGAAGCTACTCGGAGGCCTATGCCGACGGAGGCAAGCGAGTGCAT
GACAGAAGCTTTCCTGTCATGTACCTGTATACCAACGAATTCGGCTGGGTTCAGAACACTGCGCTGTCCGAGCTC
ACGGCGGACAGGGCCAGAGACACCATTACCGAGAAGATGCGCAAGGACTTGAGGGCTGCATTCGAGCTCGCCGTC
GAGCACCACCCCGTGGAGCACTACAAGCAGATTCTGAAAAACTTCCAGGAGGAGCAAATCGCCCAGGAAGAGGCC
AAGAAGCAAGCCGCCGCGACCCCCAAGAAGCCCAAGAAGGGCAAGGCCAAGGCGGTGGACGAGGATGAAGATGTC
GACATGGAGGATGTCGACGCGGCCCCCAAGTCGGCCAAGACCAAGAAGCGCAAGGCCGAGGACGAGAGCAACGCT
CCTCAACGACCCGAGTCCGTCAAGAAACCCAAGATCAAGTTGAACACGTCCTCTACCCCGAAGACGGCGAACGGT
GCGGCCACACCGAAATCTGCCGGCGGCTCCACGGCCAAGGCCACCAAGGCAAAGCCGAAAAAGGCCAAGGAGGGT
GGTGAGAAGAAGGCAGAGGCCCCCAAGGAGGTCAAGATGACGCCGGAGGAGCGTCACCAGCGCAAAGAGAAAGAA
GTCCTGTACCTCCGCCACAAGCTCCAGCGGGGCCTCCTGACCCGGGAACAGCAGCCGCGGGAAGACGAGATGAAG
TCCATGTCCGACTTCATCTCGGTGCTCGAGAGCTTTGTCGACCTCGAGGTCTCCATCATCCGCGCGACCAAAATC
AACAAGGTGCTCAAGGCCATTCTCAAGCTCGAATCGATCCCCAAGGAAGAGGAGTTTCAGTTCAAGAAGAGGTCC
CAGTCGCTGCTGGACAAGTGGAACAAGCTGCTTGCGGGCGACGCGTCGGGACCGCCGTCCGCCTCGACCAACGGA
ATCAACGGCGCAAGCGAGGAGAAGAAGACGGAGGCCAACGGCGTCAAGGACGAGGCTGGCGAGGTGAGCAAGGCC
GAGCCCGAGAAGGCCGACGAGTCCAAGGCCGACGAGTCCAAGGCCGACGAGCCCAAGACCGACGAGCCCAAGGCC
GACGAGCCCAAGGCCGACGAGCCCAAGGCCGACGAGCCCAAGGCCGACGACAAGGCCGACGAGGAGAAGTCGGAC
GACAAGCCGAGCACTCCGCAGGAAGAGGAAGAGGAGAGGCCGGCATCTGCGGCGGGAACTGCGTCCGATGTCGTC
GCGGCCGAAAATTGA
Gene >Hirsu2|6748
ATGGCCGACAAGCCCAACGAGAGCCCCGAAGCGACCGCGCCCGTCGCCGACGCCGATCAAGCTTCCGCCCCCGGC
GCTCAGAAGGACGAGCTGGAGTCGGACAAGGAGCCGTCCAAGCCCGAGGGGGAGGGCGCCAAGGAGAGCCCGAAG
AAATCTGTCGGTAGGTGCTGCACCGCTCGATACGCGTTTTTCCACCTTCTCTCCTGCGTCGCCTCCGCCTCCCCC
CTCCGCCTCCCTCTCCTGCCTGTCCCTCAACGGCCTCGCGTTTCTCGCCCCGACGGTCGGAATGGCTGCAACCGT
CTTGCGAGCCCGGCAGACGCTCCCCCCATCGGCTAGAACTGCGCTGACACGCCCCTGCGCCTCAGAAGCGGAGGA
GAACGGGCAGGACACGGCCGACAACGCGACCGAAGAAGTTGCCAAGGATCAGGAAAAGCCTGCTGCCGATGCCGA
TACTGAGATGAAGGACGCCGCCGAAGACGCGGCGCCCGAACCCGAGTCGGCACCGGCACCCCCCCCGGCCGAGGT
GCCCGCCACCAAGGCCAGGGGAGGCCGCCGCAAGTCGGCCGCCGGCGAGGCCAAGGGCAAGGCCCTGAACAAGAA
AGGATCAAAGGCGCGCCTCACCCACATTGGTGCCAAGCCCGGCGATCATTTCCTGGTGAAGCTCAAAGGCTTCCC
CGCCTGGCCGGCCATCATCTGCGACGAGACGATGCTCCCCGCCGCTCTCATCAGCAGCCGCCCCGTCTCTGCCGC
CCGCCCGGACGGAAGCTACTCGGAGGCCTATGCCGACGGAGGCAAGCGAGTGCATGACAGAAGCTTTCCTGTCAT
GTACCTGTATACCAACGAATTGTGGGTTGACCTTGGCTTGGGCCAACGAAAACATGCACTGCCTGCTGACTCTTG
CCTCTGCAGCGGCTGGGTTCAGAACACTGCGCTGTCCGAGCTCACGGCGGACAGGGCCAGAGACACCATTACCGA
GAAGATGCGCAAGGACTTGAGGGCTGCATTCGAGCTCGCCGTCGAGCACCACCCCGTGGAGCACTACAAGCAGAT
TCTGAAAAACTTCCAGGAGGAGCAAATCGCCCAGGAAGAGGCCAAGAAGCAAGCCGCCGCGACCCCCAAGAAGCC
CAAGAAGGGCAAGGCCAAGGCGGTGGACGAGGATGAAGATGTCGACATGGAGGATGTCGACGCGGCCCCCAAGTC
GGCCAAGACCAAGAAGCGCAAGGCCGAGGACGAGAGCAACGTAAGTCTTACTCCGCGCTGACAGGCAATCTCTGC
GGCTGTCAACTGACTTTGGATCCGCCCATCCAGGCTCCTCAACGACCCGAGTCCGTCAAGAAACCCAAGATCAAG
TTGAACACGTCCTCTACCCCGAAGACGGCGAACGGTGCGGCCACACCGAAATCTGCCGGCGGCTCCACGGCCAAG
GCCACCAAGGCAAAGCCGAAAAAGGCCAAGGAGGGTGGTGAGAAGAAGGCAGAGGCCCCCAAGGAGGTCAAGATG
ACGCCGGAGGAGCGTCACCAGCGCAAAGAGGTGAGTGACCATGCCGAGCGCCGCGGCTCACACAAGCTGGCTGAC
GTTGGCGCAGAAAGAAGTCCTGTACCTCCGCCACAAGCTCCAGCGGGGCCTCCTGACCCGGGAACAGCAGCCGCG
GGAAGACGAGATGAAGTCCATGTCCGACTTCATCTCGGTGCTCGAGAGCTTTGTCGACCTCGAGGTCTCCATCAT
CCGCGCGACCAAAATCAACAAGGTGCTCAAGGCCATTCTCAAGCTCGAATCGATCCCCAAGGAAGAGGAGTTTCA
GTTCAAGAAGAGGTCCCAGTCGCTGCTGGACAAGTGGAACAAGCTGCTTGCGGGCGACGCGTCGGGACCGCCGTC
CGCCTCGACCAACGGAATCAACGGCGCAAGCGAGGAGAAGAAGACGGAGGCCAACGGCGTCAAGGACGAGGCTGG
CGAGGTGAGCAAGGCCGAGCCCGAGAAGGCCGACGAGTCCAAGGCCGACGAGTCCAAGGCCGACGAGCCCAAGAC
CGACGAGCCCAAGGCCGACGAGCCCAAGGCCGACGAGCCCAAGGCCGACGAGCCCAAGGCCGACGACAAGGCCGA
CGAGGAGAAGTCGGACGACAAGCCGAGCACTCCGCAGGAAGAGGAAGAGGAGAGGCCGGCATCTGCGGCGGTGGG
TACAGCCCTGGCGCATTCTCGCCACACGGAAGGCTGACGTTGTTCGCATAGGGAACTGCGTCCGATGTCGTCGCG
GCCGAAAATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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