© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6740 |
| Gene name | |
| Location | Contig_358:16630..17205 |
| Strand | - |
| Gene length (bp) | 575 |
| Transcript length (bp) | 501 |
| Coding sequence length (bp) | 501 |
| Protein length (aa) | 167 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | 0.0774 | 0.0517 | 0.8335 | 0.511 | 0.0687 | 0.0049 | 0.1671 | 0.1116 | 0.1457 | 0.002 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 20 | 0.9997 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 27 | 22 |
| 2 | 143 | 165 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 7665 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|6740 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6740 MRSSAFLGLLATYVLGAGAAQSLSGYVKDVPECAYAAFAKAMSEEGCKIKGVDADDLECLCKHMSSISIGVSREV ETRCAANFGQAIGSACGMWRAHGTTATDLPAATSLLAKELAGQTPGSSSATATATATESKSKNFAAAATPAPGLV GLVGGAAAAAFVGILV* |
| Coding | >Hirsu2|6740 ATGAGGTCCTCGGCCTTCCTCGGCCTCCTGGCCACCTACGTGCTCGGCGCCGGCGCCGCCCAGAGCCTGTCGGGC TACGTCAAAGACGTCCCCGAGTGCGCCTACGCCGCCTTCGCCAAGGCCATGTCCGAGGAGGGCTGCAAGATCAAA GGCGTCGACGCCGACGACCTCGAATGTCTCTGCAAGCACATGTCCAGCATCTCCATCGGCGTGTCCAGGGAGGTC GAAACGCGCTGTGCTGCAAACTTCGGCCAGGCCATCGGCTCCGCCTGCGGCATGTGGAGGGCCCACGGGACGACG GCTACCGACCTGCCCGCCGCGACCAGTCTCCTGGCCAAGGAGCTCGCCGGCCAGACGCCTGGTTCAAGCTCGGCG ACCGCGACCGCGACCGCGACCGAATCCAAGTCCAAGAACTTCGCCGCCGCGGCCACGCCGGCTCCGGGCCTCGTC GGCCTTGTCGGTGGTGCTGCCGCCGCCGCTTTCGTCGGCATCTTGGTCTGA |
| Transcript | >Hirsu2|6740 ATGAGGTCCTCGGCCTTCCTCGGCCTCCTGGCCACCTACGTGCTCGGCGCCGGCGCCGCCCAGAGCCTGTCGGGC TACGTCAAAGACGTCCCCGAGTGCGCCTACGCCGCCTTCGCCAAGGCCATGTCCGAGGAGGGCTGCAAGATCAAA GGCGTCGACGCCGACGACCTCGAATGTCTCTGCAAGCACATGTCCAGCATCTCCATCGGCGTGTCCAGGGAGGTC GAAACGCGCTGTGCTGCAAACTTCGGCCAGGCCATCGGCTCCGCCTGCGGCATGTGGAGGGCCCACGGGACGACG GCTACCGACCTGCCCGCCGCGACCAGTCTCCTGGCCAAGGAGCTCGCCGGCCAGACGCCTGGTTCAAGCTCGGCG ACCGCGACCGCGACCGCGACCGAATCCAAGTCCAAGAACTTCGCCGCCGCGGCCACGCCGGCTCCGGGCCTCGTC GGCCTTGTCGGTGGTGCTGCCGCCGCCGCTTTCGTCGGCATCTTGGTCTGA |
| Gene | >Hirsu2|6740 ATGAGGTCCTCGGCCTTCCTCGGCCTCCTGGCCACCTACGTGCTCGGCGCCGGCGCCGCCCAGAGCCTGTCGGGC TACGTCAAAGACGTCCCCGAGTGCGCCTACGCCGCCTTCGCCAAGGCCATGTCCGAGGAGGGCTGCAAGATCAAA GGCGTCGACGCCGACGACCTCGAATGTCTCTGCAAGCACATGTCCAGCATCTCCATCGGCGTGTCCAGGGAGGTC GAAACGCGCTGTGCTGCAAGTCCGTATATCCGCTTCCCCCGGCCCATCCCGGGCCCCGTCGTCCGTCCGCTAATC GAAATCATCGCTTGCCAGACTTCGGCCAGGCCATCGGCTCCGCCTGCGGCATGTGGAGGGCCCACGGGACGACGG CTACCGACCTGCCCGCCGCGACCAGTCTCCTGGCCAAGGAGCTCGCCGGCCAGACGCCTGGTTCAAGCTCGGCGA CCGCGACCGCGACCGCGACCGAATCCAAGTCCAAGAACTTCGCCGCCGCGGCCACGCCGGCTCCGGGCCTCGTCG GCCTTGTCGGTGGTGCTGCCGCCGCCGCTTTCGTCGGCATCTTGGTCTGA |