Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6740
Gene name
LocationContig_358:16630..17205
Strand-
Gene length (bp)575
Transcript length (bp)501
Coding sequence length (bp)501
Protein length (aa) 167

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular 0.0774 0.0517 0.8335 0.511 0.0687 0.0049 0.1671 0.1116 0.1457 0.002

SignalP

SignalP signal predicted Location Score
Yes 1 - 20 0.9997

Transmembrane Domains

Domain # Start End Length
1 5 27 22
2 143 165 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup7665
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|6740 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6740
MRSSAFLGLLATYVLGAGAAQSLSGYVKDVPECAYAAFAKAMSEEGCKIKGVDADDLECLCKHMSSISIGVSREV
ETRCAANFGQAIGSACGMWRAHGTTATDLPAATSLLAKELAGQTPGSSSATATATATESKSKNFAAAATPAPGLV
GLVGGAAAAAFVGILV*
Coding >Hirsu2|6740
ATGAGGTCCTCGGCCTTCCTCGGCCTCCTGGCCACCTACGTGCTCGGCGCCGGCGCCGCCCAGAGCCTGTCGGGC
TACGTCAAAGACGTCCCCGAGTGCGCCTACGCCGCCTTCGCCAAGGCCATGTCCGAGGAGGGCTGCAAGATCAAA
GGCGTCGACGCCGACGACCTCGAATGTCTCTGCAAGCACATGTCCAGCATCTCCATCGGCGTGTCCAGGGAGGTC
GAAACGCGCTGTGCTGCAAACTTCGGCCAGGCCATCGGCTCCGCCTGCGGCATGTGGAGGGCCCACGGGACGACG
GCTACCGACCTGCCCGCCGCGACCAGTCTCCTGGCCAAGGAGCTCGCCGGCCAGACGCCTGGTTCAAGCTCGGCG
ACCGCGACCGCGACCGCGACCGAATCCAAGTCCAAGAACTTCGCCGCCGCGGCCACGCCGGCTCCGGGCCTCGTC
GGCCTTGTCGGTGGTGCTGCCGCCGCCGCTTTCGTCGGCATCTTGGTCTGA
Transcript >Hirsu2|6740
ATGAGGTCCTCGGCCTTCCTCGGCCTCCTGGCCACCTACGTGCTCGGCGCCGGCGCCGCCCAGAGCCTGTCGGGC
TACGTCAAAGACGTCCCCGAGTGCGCCTACGCCGCCTTCGCCAAGGCCATGTCCGAGGAGGGCTGCAAGATCAAA
GGCGTCGACGCCGACGACCTCGAATGTCTCTGCAAGCACATGTCCAGCATCTCCATCGGCGTGTCCAGGGAGGTC
GAAACGCGCTGTGCTGCAAACTTCGGCCAGGCCATCGGCTCCGCCTGCGGCATGTGGAGGGCCCACGGGACGACG
GCTACCGACCTGCCCGCCGCGACCAGTCTCCTGGCCAAGGAGCTCGCCGGCCAGACGCCTGGTTCAAGCTCGGCG
ACCGCGACCGCGACCGCGACCGAATCCAAGTCCAAGAACTTCGCCGCCGCGGCCACGCCGGCTCCGGGCCTCGTC
GGCCTTGTCGGTGGTGCTGCCGCCGCCGCTTTCGTCGGCATCTTGGTCTGA
Gene >Hirsu2|6740
ATGAGGTCCTCGGCCTTCCTCGGCCTCCTGGCCACCTACGTGCTCGGCGCCGGCGCCGCCCAGAGCCTGTCGGGC
TACGTCAAAGACGTCCCCGAGTGCGCCTACGCCGCCTTCGCCAAGGCCATGTCCGAGGAGGGCTGCAAGATCAAA
GGCGTCGACGCCGACGACCTCGAATGTCTCTGCAAGCACATGTCCAGCATCTCCATCGGCGTGTCCAGGGAGGTC
GAAACGCGCTGTGCTGCAAGTCCGTATATCCGCTTCCCCCGGCCCATCCCGGGCCCCGTCGTCCGTCCGCTAATC
GAAATCATCGCTTGCCAGACTTCGGCCAGGCCATCGGCTCCGCCTGCGGCATGTGGAGGGCCCACGGGACGACGG
CTACCGACCTGCCCGCCGCGACCAGTCTCCTGGCCAAGGAGCTCGCCGGCCAGACGCCTGGTTCAAGCTCGGCGA
CCGCGACCGCGACCGCGACCGAATCCAAGTCCAAGAACTTCGCCGCCGCGGCCACGCCGGCTCCGGGCCTCGTCG
GCCTTGTCGGTGGTGCTGCCGCCGCCGCTTTCGTCGGCATCTTGGTCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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