Protein ID | Hirsu2|6740 |
Gene name | |
Location | Contig_358:16630..17205 |
Strand | - |
Gene length (bp) | 575 |
Transcript length (bp) | 501 |
Coding sequence length (bp) | 501 |
Protein length (aa) | 167 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | 0.0774 | 0.0517 | 0.8335 | 0.511 | 0.0687 | 0.0049 | 0.1671 | 0.1116 | 0.1457 | 0.002 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 20 | 0.9997 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 5 | 27 | 22 |
2 | 143 | 165 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 7665 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps subramaniannii | Hirsu2|6740 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6740 MRSSAFLGLLATYVLGAGAAQSLSGYVKDVPECAYAAFAKAMSEEGCKIKGVDADDLECLCKHMSSISIGVSREV ETRCAANFGQAIGSACGMWRAHGTTATDLPAATSLLAKELAGQTPGSSSATATATATESKSKNFAAAATPAPGLV GLVGGAAAAAFVGILV* |
Coding | >Hirsu2|6740 ATGAGGTCCTCGGCCTTCCTCGGCCTCCTGGCCACCTACGTGCTCGGCGCCGGCGCCGCCCAGAGCCTGTCGGGC TACGTCAAAGACGTCCCCGAGTGCGCCTACGCCGCCTTCGCCAAGGCCATGTCCGAGGAGGGCTGCAAGATCAAA GGCGTCGACGCCGACGACCTCGAATGTCTCTGCAAGCACATGTCCAGCATCTCCATCGGCGTGTCCAGGGAGGTC GAAACGCGCTGTGCTGCAAACTTCGGCCAGGCCATCGGCTCCGCCTGCGGCATGTGGAGGGCCCACGGGACGACG GCTACCGACCTGCCCGCCGCGACCAGTCTCCTGGCCAAGGAGCTCGCCGGCCAGACGCCTGGTTCAAGCTCGGCG ACCGCGACCGCGACCGCGACCGAATCCAAGTCCAAGAACTTCGCCGCCGCGGCCACGCCGGCTCCGGGCCTCGTC GGCCTTGTCGGTGGTGCTGCCGCCGCCGCTTTCGTCGGCATCTTGGTCTGA |
Transcript | >Hirsu2|6740 ATGAGGTCCTCGGCCTTCCTCGGCCTCCTGGCCACCTACGTGCTCGGCGCCGGCGCCGCCCAGAGCCTGTCGGGC TACGTCAAAGACGTCCCCGAGTGCGCCTACGCCGCCTTCGCCAAGGCCATGTCCGAGGAGGGCTGCAAGATCAAA GGCGTCGACGCCGACGACCTCGAATGTCTCTGCAAGCACATGTCCAGCATCTCCATCGGCGTGTCCAGGGAGGTC GAAACGCGCTGTGCTGCAAACTTCGGCCAGGCCATCGGCTCCGCCTGCGGCATGTGGAGGGCCCACGGGACGACG GCTACCGACCTGCCCGCCGCGACCAGTCTCCTGGCCAAGGAGCTCGCCGGCCAGACGCCTGGTTCAAGCTCGGCG ACCGCGACCGCGACCGCGACCGAATCCAAGTCCAAGAACTTCGCCGCCGCGGCCACGCCGGCTCCGGGCCTCGTC GGCCTTGTCGGTGGTGCTGCCGCCGCCGCTTTCGTCGGCATCTTGGTCTGA |
Gene | >Hirsu2|6740 ATGAGGTCCTCGGCCTTCCTCGGCCTCCTGGCCACCTACGTGCTCGGCGCCGGCGCCGCCCAGAGCCTGTCGGGC TACGTCAAAGACGTCCCCGAGTGCGCCTACGCCGCCTTCGCCAAGGCCATGTCCGAGGAGGGCTGCAAGATCAAA GGCGTCGACGCCGACGACCTCGAATGTCTCTGCAAGCACATGTCCAGCATCTCCATCGGCGTGTCCAGGGAGGTC GAAACGCGCTGTGCTGCAAGTCCGTATATCCGCTTCCCCCGGCCCATCCCGGGCCCCGTCGTCCGTCCGCTAATC GAAATCATCGCTTGCCAGACTTCGGCCAGGCCATCGGCTCCGCCTGCGGCATGTGGAGGGCCCACGGGACGACGG CTACCGACCTGCCCGCCGCGACCAGTCTCCTGGCCAAGGAGCTCGCCGGCCAGACGCCTGGTTCAAGCTCGGCGA CCGCGACCGCGACCGCGACCGAATCCAAGTCCAAGAACTTCGCCGCCGCGGCCACGCCGGCTCCGGGCCTCGTCG GCCTTGTCGGTGGTGCTGCCGCCGCCGCTTTCGTCGGCATCTTGGTCTGA |