Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6740
Gene name
LocationContig_358:16630..17205
Strand-
Gene length (bp)575
Transcript length (bp)501
Coding sequence length (bp)501
Protein length (aa) 167

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 5 27 22
2 143 165 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6740
MRSSAFLGLLATYVLGAGAAQSLSGYVKDVPECAYAAFAKAMSEEGCKIKGVDADDLECLCKHMSSISIGVSREV
ETRCAANFGQAIGSACGMWRAHGTTATDLPAATSLLAKELAGQTPGSSSATATATATESKSKNFAAAATPAPGLV
GLVGGAAAAAFVGILV*
Coding >Hirsu2|6740
ATGAGGTCCTCGGCCTTCCTCGGCCTCCTGGCCACCTACGTGCTCGGCGCCGGCGCCGCCCAGAGCCTGTCGGGC
TACGTCAAAGACGTCCCCGAGTGCGCCTACGCCGCCTTCGCCAAGGCCATGTCCGAGGAGGGCTGCAAGATCAAA
GGCGTCGACGCCGACGACCTCGAATGTCTCTGCAAGCACATGTCCAGCATCTCCATCGGCGTGTCCAGGGAGGTC
GAAACGCGCTGTGCTGCAAACTTCGGCCAGGCCATCGGCTCCGCCTGCGGCATGTGGAGGGCCCACGGGACGACG
GCTACCGACCTGCCCGCCGCGACCAGTCTCCTGGCCAAGGAGCTCGCCGGCCAGACGCCTGGTTCAAGCTCGGCG
ACCGCGACCGCGACCGCGACCGAATCCAAGTCCAAGAACTTCGCCGCCGCGGCCACGCCGGCTCCGGGCCTCGTC
GGCCTTGTCGGTGGTGCTGCCGCCGCCGCTTTCGTCGGCATCTTGGTCTGA
Transcript >Hirsu2|6740
ATGAGGTCCTCGGCCTTCCTCGGCCTCCTGGCCACCTACGTGCTCGGCGCCGGCGCCGCCCAGAGCCTGTCGGGC
TACGTCAAAGACGTCCCCGAGTGCGCCTACGCCGCCTTCGCCAAGGCCATGTCCGAGGAGGGCTGCAAGATCAAA
GGCGTCGACGCCGACGACCTCGAATGTCTCTGCAAGCACATGTCCAGCATCTCCATCGGCGTGTCCAGGGAGGTC
GAAACGCGCTGTGCTGCAAACTTCGGCCAGGCCATCGGCTCCGCCTGCGGCATGTGGAGGGCCCACGGGACGACG
GCTACCGACCTGCCCGCCGCGACCAGTCTCCTGGCCAAGGAGCTCGCCGGCCAGACGCCTGGTTCAAGCTCGGCG
ACCGCGACCGCGACCGCGACCGAATCCAAGTCCAAGAACTTCGCCGCCGCGGCCACGCCGGCTCCGGGCCTCGTC
GGCCTTGTCGGTGGTGCTGCCGCCGCCGCTTTCGTCGGCATCTTGGTCTGA
Gene >Hirsu2|6740
ATGAGGTCCTCGGCCTTCCTCGGCCTCCTGGCCACCTACGTGCTCGGCGCCGGCGCCGCCCAGAGCCTGTCGGGC
TACGTCAAAGACGTCCCCGAGTGCGCCTACGCCGCCTTCGCCAAGGCCATGTCCGAGGAGGGCTGCAAGATCAAA
GGCGTCGACGCCGACGACCTCGAATGTCTCTGCAAGCACATGTCCAGCATCTCCATCGGCGTGTCCAGGGAGGTC
GAAACGCGCTGTGCTGCAAGTCCGTATATCCGCTTCCCCCGGCCCATCCCGGGCCCCGTCGTCCGTCCGCTAATC
GAAATCATCGCTTGCCAGACTTCGGCCAGGCCATCGGCTCCGCCTGCGGCATGTGGAGGGCCCACGGGACGACGG
CTACCGACCTGCCCGCCGCGACCAGTCTCCTGGCCAAGGAGCTCGCCGGCCAGACGCCTGGTTCAAGCTCGGCGA
CCGCGACCGCGACCGCGACCGAATCCAAGTCCAAGAACTTCGCCGCCGCGGCCACGCCGGCTCCGGGCCTCGTCG
GCCTTGTCGGTGGTGCTGCCGCCGCCGCTTTCGTCGGCATCTTGGTCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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