© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|6724 |
| Gene name | |
| Location | Contig_356:598..1957 |
| Strand | - |
| Gene length (bp) | 1359 |
| Transcript length (bp) | 1059 |
| Coding sequence length (bp) | 1059 |
| Protein length (aa) | 353 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.3E-28 | 52 | 344 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P6J7|YHD3_SCHPO | Uncharacterized MFS-type transporter C1683.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.03c PE=3 SV=1 | 6 | 343 | 3.0E-27 |
| sp|Q08902|YO378_YEAST | Drug resistance protein YOR378W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR378W PE=1 SV=1 | 44 | 335 | 1.0E-24 |
| sp|P9WJY5|EFPA_MYCTU | Uncharacterized MFS-type transporter EfpA OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=efpA PE=1 SV=1 | 2 | 202 | 8.0E-14 |
| sp|P9WJY4|EFPA_MYCTO | Uncharacterized MFS-type transporter EfpA OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=efpA PE=3 SV=1 | 2 | 202 | 8.0E-14 |
| sp|P39886|TCMA_STRGA | Tetracenomycin C resistance and export protein OS=Streptomyces glaucescens GN=tcmA PE=3 SV=1 | 63 | 220 | 9.0E-13 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P6J7|YHD3_SCHPO | Uncharacterized MFS-type transporter C1683.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.03c PE=3 SV=1 | 6 | 343 | 3.0E-27 |
| sp|Q08902|YO378_YEAST | Drug resistance protein YOR378W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR378W PE=1 SV=1 | 44 | 335 | 1.0E-24 |
| sp|P9WJY5|EFPA_MYCTU | Uncharacterized MFS-type transporter EfpA OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=efpA PE=1 SV=1 | 2 | 202 | 8.0E-14 |
| sp|P9WJY4|EFPA_MYCTO | Uncharacterized MFS-type transporter EfpA OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=efpA PE=3 SV=1 | 2 | 202 | 8.0E-14 |
| sp|P39886|TCMA_STRGA | Tetracenomycin C resistance and export protein OS=Streptomyces glaucescens GN=tcmA PE=3 SV=1 | 63 | 220 | 9.0E-13 |
| sp|P46105|ACT22_STRCO | Probable actinorhodin transporter OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=actII-2 PE=3 SV=1 | 40 | 343 | 2.0E-12 |
| sp|P13090|ATR1_YEAST | Aminotriazole resistance protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATR1 PE=1 SV=2 | 45 | 343 | 1.0E-11 |
| sp|Q04733|CMCT_AMYLA | Cephamycin export protein CmcT OS=Amycolatopsis lactamdurans GN=cmcT PE=3 SV=1 | 52 | 202 | 2.0E-11 |
| sp|P9WG90|STP_MYCTO | Multidrug resistance protein Stp OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=stp PE=3 SV=1 | 37 | 202 | 7.0E-11 |
| sp|P0A0J8|QACA_STAAM | Antiseptic resistance protein OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=qacA PE=3 SV=1 | 38 | 226 | 1.0E-10 |
| sp|P0A0J9|QACA_STAAU | Antiseptic resistance protein OS=Staphylococcus aureus GN=qacA PE=1 SV=1 | 38 | 226 | 1.0E-10 |
| sp|P42670|PUR8_STRAD | Puromycin resistance protein pur8 OS=Streptomyces alboniger GN=pur8 PE=3 SV=1 | 46 | 209 | 9.0E-10 |
| sp|P9WG91|STP_MYCTU | Multidrug resistance protein Stp OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=stp PE=1 SV=1 | 37 | 202 | 1.0E-09 |
| sp|Q03263|YM8M_YEAST | Uncharacterized transporter YMR279C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR279C PE=1 SV=1 | 3 | 207 | 9.0E-09 |
| sp|Q9USN4|YJA1_SCHPO | Uncharacterized transporter C1529.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1529.01 PE=3 SV=2 | 49 | 212 | 5.0E-08 |
| sp|P46104|LMRA_STRLN | Lincomycin resistance protein OS=Streptomyces lincolnensis GN=lmrA PE=3 SV=1 | 54 | 202 | 7.0E-07 |
| sp|O32182|YUSP_BACSU | Uncharacterized MFS-type transporter YusP OS=Bacillus subtilis (strain 168) GN=yusP PE=3 SV=1 | 38 | 202 | 1.0E-06 |
| sp|Q00538|MMR_BACSU | Methylenomycin A resistance protein OS=Bacillus subtilis (strain 168) GN=mmr PE=3 SV=1 | 54 | 202 | 1.0E-06 |
| sp|P9WJW9|Y2459_MYCTU | Uncharacterized MFS-type transporter Rv2459 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv2459 PE=3 SV=1 | 37 | 202 | 2.0E-06 |
| sp|P9WJW8|Y2459_MYCTO | Uncharacterized MFS-type transporter MT2534 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT2534 PE=3 SV=1 | 37 | 202 | 2.0E-06 |
| sp|P38125|DTR1_YEAST | Dityrosine transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DTR1 PE=1 SV=1 | 67 | 221 | 1.0E-05 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 65 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 44 | 66 | 22 |
| 2 | 81 | 103 | 22 |
| 3 | 110 | 129 | 19 |
| 4 | 139 | 161 | 22 |
| 5 | 168 | 190 | 22 |
| 6 | 200 | 222 | 22 |
| 7 | 290 | 308 | 18 |
| 8 | 318 | 337 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6724 MAVRTTERRPSSHRTSSNTSEKGEDDHGDGQGLKLPMSKAKCIALVATVTGAAFLNTLSIQSVVIILPTIGNELS VPECRQQWIVSSYSLTFGCFLLFWGRVADIYGMRLIFILGSVWVTIVTAANPFMPHEVAFDLFRGLHGLGAAANV PTAIGILGVTFPPGKAKNYAFSTYAVGAPLGNVFGNIVSGLIAEYSSWKWVFGASAIMAGAIAVAGIVFIPPRSK MEAFETAAPRTAAPSPATATTTSQMDDDVAVTTPPAGGHGGGYDGLEPRRSPLPAIPPQPPSVDWIGAVLITTSL TALMFALTEGNVVGWDTPWIPVIIVGSLLVIVAFVFWQRRLERLNRPDGGPP* |
| Coding | >Hirsu2|6724 ATGGCAGTCAGGACGACGGAAAGGAGGCCGTCATCGCACCGCACCAGCTCGAACACGTCCGAGAAGGGCGAGGAT GACCATGGTGACGGCCAGGGCCTGAAGCTGCCCATGTCCAAGGCGAAGTGCATCGCCCTGGTGGCCACGGTGACG GGCGCCGCCTTTCTCAATACCCTTTCCATCCAGAGCGTCGTCATCATCCTGCCGACGATCGGCAATGAGCTGTCG GTGCCCGAGTGTCGGCAACAGTGGATCGTCTCGTCGTACTCGCTCACCTTTGGCTGCTTTTTGCTCTTCTGGGGC CGCGTCGCCGATATCTACGGCATGCGCCTCATCTTCATCCTCGGCTCCGTCTGGGTCACGATCGTGACGGCGGCA AATCCCTTTATGCCGCATGAGGTTGCCTTCGACCTGTTTCGCGGTCTCCACGGCCTGGGTGCTGCGGCTAATGTC CCCACGGCAATAGGCATCCTCGGCGTCACGTTCCCCCCCGGCAAGGCCAAGAACTACGCCTTCAGCACGTACGCC GTCGGAGCGCCGCTCGGCAACGTCTTTGGCAACATCGTCTCGGGGCTCATAGCCGAGTACTCGAGCTGGAAATGG GTCTTCGGCGCCTCTGCCATCATGGCGGGCGCGATTGCTGTGGCCGGCATCGTCTTCATCCCGCCGCGGTCCAAG ATGGAAGCATTCGAGACGGCCGCCCCTCGGACCGCGGCTCCGAGCCCGGCAACAGCAACCACAACATCCCAGATG GACGACGACGTGGCCGTCACCACTCCTCCCGCTGGTGGCCATGGCGGCGGTTATGACGGTCTTGAGCCCAGGCGC TCTCCCCTCCCTGCCATCCCCCCGCAACCGCCGTCTGTCGACTGGATCGGCGCCGTCCTCATCACGACCAGCCTC ACGGCTCTCATGTTTGCTCTGACCGAAGGCAACGTGGTCGGCTGGGACACTCCCTGGATCCCCGTCATCATCGTC GGCTCCCTGCTCGTCATCGTCGCCTTCGTCTTCTGGCAGCGGCGCCTGGAGCGCCTCAACAGGCCGGACGGCGGC CCGCCGTGA |
| Transcript | >Hirsu2|6724 ATGGCAGTCAGGACGACGGAAAGGAGGCCGTCATCGCACCGCACCAGCTCGAACACGTCCGAGAAGGGCGAGGAT GACCATGGTGACGGCCAGGGCCTGAAGCTGCCCATGTCCAAGGCGAAGTGCATCGCCCTGGTGGCCACGGTGACG GGCGCCGCCTTTCTCAATACCCTTTCCATCCAGAGCGTCGTCATCATCCTGCCGACGATCGGCAATGAGCTGTCG GTGCCCGAGTGTCGGCAACAGTGGATCGTCTCGTCGTACTCGCTCACCTTTGGCTGCTTTTTGCTCTTCTGGGGC CGCGTCGCCGATATCTACGGCATGCGCCTCATCTTCATCCTCGGCTCCGTCTGGGTCACGATCGTGACGGCGGCA AATCCCTTTATGCCGCATGAGGTTGCCTTCGACCTGTTTCGCGGTCTCCACGGCCTGGGTGCTGCGGCTAATGTC CCCACGGCAATAGGCATCCTCGGCGTCACGTTCCCCCCCGGCAAGGCCAAGAACTACGCCTTCAGCACGTACGCC GTCGGAGCGCCGCTCGGCAACGTCTTTGGCAACATCGTCTCGGGGCTCATAGCCGAGTACTCGAGCTGGAAATGG GTCTTCGGCGCCTCTGCCATCATGGCGGGCGCGATTGCTGTGGCCGGCATCGTCTTCATCCCGCCGCGGTCCAAG ATGGAAGCATTCGAGACGGCCGCCCCTCGGACCGCGGCTCCGAGCCCGGCAACAGCAACCACAACATCCCAGATG GACGACGACGTGGCCGTCACCACTCCTCCCGCTGGTGGCCATGGCGGCGGTTATGACGGTCTTGAGCCCAGGCGC TCTCCCCTCCCTGCCATCCCCCCGCAACCGCCGTCTGTCGACTGGATCGGCGCCGTCCTCATCACGACCAGCCTC ACGGCTCTCATGTTTGCTCTGACCGAAGGCAACGTGGTCGGCTGGGACACTCCCTGGATCCCCGTCATCATCGTC GGCTCCCTGCTCGTCATCGTCGCCTTCGTCTTCTGGCAGCGGCGCCTGGAGCGCCTCAACAGGCCGGACGGCGGC CCGCCGTGA |
| Gene | >Hirsu2|6724 ATGGCAGTCAGGACGACGGAAAGGAGGCCGTCATCGCACCGCACCAGCTCGAACACGTCCGAGAAGGGCGAGGAT GACCATGGTGACGGCCAGGGCCTGAAGCTGCCCATGTCCAAGGCGAAGTGCATCGCCCTGGTGGCCACGGTGACG GGCGCCGCCTTTCTCAATGTCAGTGCCCTCGCCTCTCTCCCGATCGGACCGAGGAACTGACGGCCGGTCTTTTGT CCTCGAGCGCGCCTGCAGACCCTTTCCATCCAGAGCGTCGTCATCATCCTGCCGACGATCGGCAATGAGCTGTCG GTGCCCGAGTGTCGGCAACAGTGGATCGTCTCGTCGTACTCGCTCACCTTTGGCTGCTTTTTGCTCTTCTGGGGC CGCGTCGCCGATATCTACGGCATGCGCCTCATCTTCATCCTCGGCTCCGTCTGGGTCACGATCGTGACGGCGGCA AATCCCTTTATGCCGCATGAGGTTGCCTTCGACCTGTTTCGCGGTCTCCACGGCCTGGTAGGATCACGTCTGTCG ACTCGGGAGCGACCTGGCTGACTGGCTCGTCTGTAGGGTGCTGCGGCTAATGTCCCCACGGCAATAGGCATCCTC GGCGTCACGTTCCCCCCCGGCAAGGCCAAGAACTACGCCTTCAGCACGTACGGTTCGTCTCCGCTGCTCTCCGCA CTCAGGGCGAGCGCCCAGCGTTGTAACGTGGCGGTCTAGGCTGACGATTCAACCTGTCTGTTCCCGGTGCAGCCG TCGGAGCGCCGCTCGGCAACGTCTTTGGCAACATCGTCTCGGGGCTCATAGCCGAGTACTCGAGCTGGAAATGGG TCTTCGGCGCCTCTGCCATCATGGCGGGCGCGATTGCTGTGGCCGGCATCGTCTTCATCCCGCCGCGGTCCAAGA TGGAAGCATTCGAGACGGCCGCCCCTCGGACCGCGGCTCCGAGCCCGGCAACAGCAACCACAACATCCCAGATGG ACGACGACGTGGCCGTCACCACTCCTCCCGCTGGTGGCCATGGCGGCGGTTATGACGGTCTTGAGCCCAGGCGCT CTCCCCTCCCTGCCATCCCCCCGCAACCGCCGTCTGTCGACTGGATCGGCGCCGTCCTCATCACGACCAGCCTCA CGGCTCTCATGTTTGCTCTGACCGAAGGCAACGTGGTCGGCTGGGACACTCCCTGGATCCCCGTCATCATCGTCG GCTCCCTGCTCGTCATCGTCGCCTTCGTCTTCTGGCAGCGGCGCCTGGAGCGCCTCAACAGGCCGGACGGCGGCC GTGCCCGGCGCTCGCACCGGCTGCTCTCGCCGCCGCCCCTAATGAAGGTGTCCATCTTCGGCAACGTGCGCTTCA GCGCCGTGA |