Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|6707
Gene name
Location	Contig_353:5484..6324
Strand	-
Gene length (bp)	840
Transcript length (bp)	840
Coding sequence length (bp)	840
Protein length (aa)	280

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01375	Enterotoxin_a	Heat-labile enterotoxin alpha chain	6.0E-27	58	235

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P43528\|E2BA_ECOLX	Heat-labile enterotoxin IIB, A chain OS=Escherichia coli PE=1 SV=2	59	217	7.0E-17
sp\|P13810\|E2AA_ECOLX	Heat-labile enterotoxin IIA, A chain OS=Escherichia coli PE=3 SV=1	59	191	2.0E-15
sp\|A2PU44\|CHELT_VIBCL	NAD(+)--arginine ADP-ribosyltransferase Chelt OS=Vibrio cholerae GN=A51_B1772 PE=1 SV=1	59	203	3.0E-14
sp\|P01555\|CHTA_VIBCH	Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1	58	231	1.0E-12
sp\|P43530\|ELAH_ECOH1	Heat-labile enterotoxin A chain OS=Escherichia coli O78:H11 (strain H10407 / ETEC) GN=eltA PE=3 SV=1	58	231	4.0E-11

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P43528\|E2BA_ECOLX	Heat-labile enterotoxin IIB, A chain OS=Escherichia coli PE=1 SV=2	59	217	7.0E-17
sp\|P13810\|E2AA_ECOLX	Heat-labile enterotoxin IIA, A chain OS=Escherichia coli PE=3 SV=1	59	191	2.0E-15
sp\|A2PU44\|CHELT_VIBCL	NAD(+)--arginine ADP-ribosyltransferase Chelt OS=Vibrio cholerae GN=A51_B1772 PE=1 SV=1	59	203	3.0E-14
sp\|P01555\|CHTA_VIBCH	Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1	58	231	1.0E-12
sp\|P43530\|ELAH_ECOH1	Heat-labile enterotoxin A chain OS=Escherichia coli O78:H11 (strain H10407 / ETEC) GN=eltA PE=3 SV=1	58	231	4.0E-11
sp\|P06717\|ELAP_ECOLX	Heat-labile enterotoxin A chain OS=Escherichia coli GN=eltA PE=1 SV=1	58	231	5.0E-11

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GO

GO Term	Description	Terminal node
GO:0090729	toxin activity	Yes
GO:0005615	extracellular space	Yes
GO:0005575	cellular_component	No
GO:0003674	molecular_function	No
GO:0110165	cellular anatomical entity	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 29	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	12	34	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|6707 MSSTHTRWAFRAVSLFLCLFFWASGCSALPATLVRESNTKQPQALHARESALKLPSVVYRGDGRDPSRIKEAGGF LPHSQYPPLSELAFSVYNHVLDIIVDQNTRERNTIYVSTSSVFGIAAMFASNRTGGGWLYDISAAPNMISVEGTL LEESPFPEESEYAAIGGINWSQVAGWMFLSENYTDMEWSRDEPHSEAEFFSLSYRYVRNPDYESRWDRYTASVGQ PQLAGFYGKKSDCNSKKPWMDYPLEVPSRLIKYAHQFMRPLAEVMGTDHFFRLF*
Coding	>Hirsu2\|6707 ATGTCCTCGACACATACACGATGGGCCTTCCGGGCCGTGTCTTTGTTCCTGTGTCTGTTCTTCTGGGCGAGCGGC TGCTCAGCTCTTCCCGCGACTCTCGTGCGGGAGTCGAATACCAAACAGCCGCAGGCTCTACATGCCAGAGAAAGT GCGCTGAAGCTGCCGTCCGTGGTATACCGCGGCGACGGCAGAGACCCGAGCAGGATCAAAGAGGCGGGCGGCTTC CTGCCGCATTCCCAGTACCCTCCTCTGTCGGAGCTCGCGTTCAGCGTCTACAACCACGTGCTCGACATCATCGTC GATCAAAACACAAGGGAGAGAAATACGATCTATGTGTCGACGTCGTCGGTCTTCGGCATCGCGGCCATGTTCGCC TCCAATCGTACCGGCGGCGGCTGGCTGTACGACATTTCTGCGGCGCCCAATATGATCTCGGTCGAGGGCACACTG CTGGAAGAGAGCCCATTTCCGGAAGAGTCCGAGTACGCGGCCATCGGGGGCATCAACTGGTCCCAAGTGGCCGGA TGGATGTTTCTCTCTGAGAACTACACGGACATGGAGTGGAGTCGTGACGAGCCTCACTCCGAAGCCGAGTTCTTT TCGCTCTCCTACCGGTATGTGCGGAATCCGGACTACGAATCGAGATGGGACCGTTATACCGCCAGCGTCGGACAG CCTCAGCTGGCCGGCTTCTACGGCAAGAAGAGCGATTGCAACTCCAAGAAGCCGTGGATGGATTACCCGCTCGAG GTCCCGTCGAGGTTGATCAAGTACGCGCATCAGTTCATGAGACCGCTGGCGGAAGTCATGGGCACAGACCACTTT TTCAGATTGTTCTAG
Transcript	>Hirsu2\|6707 ATGTCCTCGACACATACACGATGGGCCTTCCGGGCCGTGTCTTTGTTCCTGTGTCTGTTCTTCTGGGCGAGCGGC TGCTCAGCTCTTCCCGCGACTCTCGTGCGGGAGTCGAATACCAAACAGCCGCAGGCTCTACATGCCAGAGAAAGT GCGCTGAAGCTGCCGTCCGTGGTATACCGCGGCGACGGCAGAGACCCGAGCAGGATCAAAGAGGCGGGCGGCTTC CTGCCGCATTCCCAGTACCCTCCTCTGTCGGAGCTCGCGTTCAGCGTCTACAACCACGTGCTCGACATCATCGTC GATCAAAACACAAGGGAGAGAAATACGATCTATGTGTCGACGTCGTCGGTCTTCGGCATCGCGGCCATGTTCGCC TCCAATCGTACCGGCGGCGGCTGGCTGTACGACATTTCTGCGGCGCCCAATATGATCTCGGTCGAGGGCACACTG CTGGAAGAGAGCCCATTTCCGGAAGAGTCCGAGTACGCGGCCATCGGGGGCATCAACTGGTCCCAAGTGGCCGGA TGGATGTTTCTCTCTGAGAACTACACGGACATGGAGTGGAGTCGTGACGAGCCTCACTCCGAAGCCGAGTTCTTT TCGCTCTCCTACCGGTATGTGCGGAATCCGGACTACGAATCGAGATGGGACCGTTATACCGCCAGCGTCGGACAG CCTCAGCTGGCCGGCTTCTACGGCAAGAAGAGCGATTGCAACTCCAAGAAGCCGTGGATGGATTACCCGCTCGAG GTCCCGTCGAGGTTGATCAAGTACGCGCATCAGTTCATGAGACCGCTGGCGGAAGTCATGGGCACAGACCACTTT TTCAGATTGTTCTAG
Gene	>Hirsu2\|6707 ATGTCCTCGACACATACACGATGGGCCTTCCGGGCCGTGTCTTTGTTCCTGTGTCTGTTCTTCTGGGCGAGCGGC TGCTCAGCTCTTCCCGCGACTCTCGTGCGGGAGTCGAATACCAAACAGCCGCAGGCTCTACATGCCAGAGAAAGT GCGCTGAAGCTGCCGTCCGTGGTATACCGCGGCGACGGCAGAGACCCGAGCAGGATCAAAGAGGCGGGCGGCTTC CTGCCGCATTCCCAGTACCCTCCTCTGTCGGAGCTCGCGTTCAGCGTCTACAACCACGTGCTCGACATCATCGTC GATCAAAACACAAGGGAGAGAAATACGATCTATGTGTCGACGTCGTCGGTCTTCGGCATCGCGGCCATGTTCGCC TCCAATCGTACCGGCGGCGGCTGGCTGTACGACATTTCTGCGGCGCCCAATATGATCTCGGTCGAGGGCACACTG CTGGAAGAGAGCCCATTTCCGGAAGAGTCCGAGTACGCGGCCATCGGGGGCATCAACTGGTCCCAAGTGGCCGGA TGGATGTTTCTCTCTGAGAACTACACGGACATGGAGTGGAGTCGTGACGAGCCTCACTCCGAAGCCGAGTTCTTT TCGCTCTCCTACCGGTATGTGCGGAATCCGGACTACGAATCGAGATGGGACCGTTATACCGCCAGCGTCGGACAG CCTCAGCTGGCCGGCTTCTACGGCAAGAAGAGCGATTGCAACTCCAAGAAGCCGTGGATGGATTACCCGCTCGAG GTCCCGTCGAGGTTGATCAAGTACGCGCATCAGTTCATGAGACCGCTGGCGGAAGTCATGGGCACAGACCACTTT TTCAGATTGTTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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