Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6707
Gene name
LocationContig_353:5484..6324
Strand-
Gene length (bp)840
Transcript length (bp)840
Coding sequence length (bp)840
Protein length (aa) 280

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01375 Enterotoxin_a Heat-labile enterotoxin alpha chain 5.5E-27 58 235

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P43528|E2BA_ECOLX Heat-labile enterotoxin IIB, A chain OS=Escherichia coli PE=1 SV=2 59 217 7.0E-17
sp|P13810|E2AA_ECOLX Heat-labile enterotoxin IIA, A chain OS=Escherichia coli PE=3 SV=1 59 191 2.0E-15
sp|A2PU44|CHELT_VIBCL NAD(+)--arginine ADP-ribosyltransferase Chelt OS=Vibrio cholerae GN=A51_B1772 PE=1 SV=1 59 203 3.0E-14
sp|P01555|CHTA_VIBCH Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1 58 231 1.0E-12
sp|P43530|ELAH_ECOH1 Heat-labile enterotoxin A chain OS=Escherichia coli O78:H11 (strain H10407 / ETEC) GN=eltA PE=3 SV=1 58 231 4.0E-11
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P43528|E2BA_ECOLX Heat-labile enterotoxin IIB, A chain OS=Escherichia coli PE=1 SV=2 59 217 7.0E-17
sp|P13810|E2AA_ECOLX Heat-labile enterotoxin IIA, A chain OS=Escherichia coli PE=3 SV=1 59 191 2.0E-15
sp|A2PU44|CHELT_VIBCL NAD(+)--arginine ADP-ribosyltransferase Chelt OS=Vibrio cholerae GN=A51_B1772 PE=1 SV=1 59 203 3.0E-14
sp|P01555|CHTA_VIBCH Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1 58 231 1.0E-12
sp|P43530|ELAH_ECOH1 Heat-labile enterotoxin A chain OS=Escherichia coli O78:H11 (strain H10407 / ETEC) GN=eltA PE=3 SV=1 58 231 4.0E-11
sp|P06717|ELAP_ECOLX Heat-labile enterotoxin A chain OS=Escherichia coli GN=eltA PE=1 SV=1 58 231 5.0E-11
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GO

GO Term Description Terminal node
GO:0009405 pathogenesis Yes
GO:0090729 toxin activity Yes
GO:0005615 extracellular space Yes
GO:0008150 biological_process No
GO:0044421 extracellular region part No
GO:0051704 multi-organism process No
GO:0003674 molecular_function No
GO:0005575 cellular_component No
GO:0044419 interspecies interaction between organisms No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 29 0.45

Transmembrane Domains

Domain # Start End Length
1 12 34 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6707
MSSTHTRWAFRAVSLFLCLFFWASGCSALPATLVRESNTKQPQALHARESALKLPSVVYRGDGRDPSRIKEAGGF
LPHSQYPPLSELAFSVYNHVLDIIVDQNTRERNTIYVSTSSVFGIAAMFASNRTGGGWLYDISAAPNMISVEGTL
LEESPFPEESEYAAIGGINWSQVAGWMFLSENYTDMEWSRDEPHSEAEFFSLSYRYVRNPDYESRWDRYTASVGQ
PQLAGFYGKKSDCNSKKPWMDYPLEVPSRLIKYAHQFMRPLAEVMGTDHFFRLF*
Coding >Hirsu2|6707
ATGTCCTCGACACATACACGATGGGCCTTCCGGGCCGTGTCTTTGTTCCTGTGTCTGTTCTTCTGGGCGAGCGGC
TGCTCAGCTCTTCCCGCGACTCTCGTGCGGGAGTCGAATACCAAACAGCCGCAGGCTCTACATGCCAGAGAAAGT
GCGCTGAAGCTGCCGTCCGTGGTATACCGCGGCGACGGCAGAGACCCGAGCAGGATCAAAGAGGCGGGCGGCTTC
CTGCCGCATTCCCAGTACCCTCCTCTGTCGGAGCTCGCGTTCAGCGTCTACAACCACGTGCTCGACATCATCGTC
GATCAAAACACAAGGGAGAGAAATACGATCTATGTGTCGACGTCGTCGGTCTTCGGCATCGCGGCCATGTTCGCC
TCCAATCGTACCGGCGGCGGCTGGCTGTACGACATTTCTGCGGCGCCCAATATGATCTCGGTCGAGGGCACACTG
CTGGAAGAGAGCCCATTTCCGGAAGAGTCCGAGTACGCGGCCATCGGGGGCATCAACTGGTCCCAAGTGGCCGGA
TGGATGTTTCTCTCTGAGAACTACACGGACATGGAGTGGAGTCGTGACGAGCCTCACTCCGAAGCCGAGTTCTTT
TCGCTCTCCTACCGGTATGTGCGGAATCCGGACTACGAATCGAGATGGGACCGTTATACCGCCAGCGTCGGACAG
CCTCAGCTGGCCGGCTTCTACGGCAAGAAGAGCGATTGCAACTCCAAGAAGCCGTGGATGGATTACCCGCTCGAG
GTCCCGTCGAGGTTGATCAAGTACGCGCATCAGTTCATGAGACCGCTGGCGGAAGTCATGGGCACAGACCACTTT
TTCAGATTGTTCTAG
Transcript >Hirsu2|6707
ATGTCCTCGACACATACACGATGGGCCTTCCGGGCCGTGTCTTTGTTCCTGTGTCTGTTCTTCTGGGCGAGCGGC
TGCTCAGCTCTTCCCGCGACTCTCGTGCGGGAGTCGAATACCAAACAGCCGCAGGCTCTACATGCCAGAGAAAGT
GCGCTGAAGCTGCCGTCCGTGGTATACCGCGGCGACGGCAGAGACCCGAGCAGGATCAAAGAGGCGGGCGGCTTC
CTGCCGCATTCCCAGTACCCTCCTCTGTCGGAGCTCGCGTTCAGCGTCTACAACCACGTGCTCGACATCATCGTC
GATCAAAACACAAGGGAGAGAAATACGATCTATGTGTCGACGTCGTCGGTCTTCGGCATCGCGGCCATGTTCGCC
TCCAATCGTACCGGCGGCGGCTGGCTGTACGACATTTCTGCGGCGCCCAATATGATCTCGGTCGAGGGCACACTG
CTGGAAGAGAGCCCATTTCCGGAAGAGTCCGAGTACGCGGCCATCGGGGGCATCAACTGGTCCCAAGTGGCCGGA
TGGATGTTTCTCTCTGAGAACTACACGGACATGGAGTGGAGTCGTGACGAGCCTCACTCCGAAGCCGAGTTCTTT
TCGCTCTCCTACCGGTATGTGCGGAATCCGGACTACGAATCGAGATGGGACCGTTATACCGCCAGCGTCGGACAG
CCTCAGCTGGCCGGCTTCTACGGCAAGAAGAGCGATTGCAACTCCAAGAAGCCGTGGATGGATTACCCGCTCGAG
GTCCCGTCGAGGTTGATCAAGTACGCGCATCAGTTCATGAGACCGCTGGCGGAAGTCATGGGCACAGACCACTTT
TTCAGATTGTTCTAG
Gene >Hirsu2|6707
ATGTCCTCGACACATACACGATGGGCCTTCCGGGCCGTGTCTTTGTTCCTGTGTCTGTTCTTCTGGGCGAGCGGC
TGCTCAGCTCTTCCCGCGACTCTCGTGCGGGAGTCGAATACCAAACAGCCGCAGGCTCTACATGCCAGAGAAAGT
GCGCTGAAGCTGCCGTCCGTGGTATACCGCGGCGACGGCAGAGACCCGAGCAGGATCAAAGAGGCGGGCGGCTTC
CTGCCGCATTCCCAGTACCCTCCTCTGTCGGAGCTCGCGTTCAGCGTCTACAACCACGTGCTCGACATCATCGTC
GATCAAAACACAAGGGAGAGAAATACGATCTATGTGTCGACGTCGTCGGTCTTCGGCATCGCGGCCATGTTCGCC
TCCAATCGTACCGGCGGCGGCTGGCTGTACGACATTTCTGCGGCGCCCAATATGATCTCGGTCGAGGGCACACTG
CTGGAAGAGAGCCCATTTCCGGAAGAGTCCGAGTACGCGGCCATCGGGGGCATCAACTGGTCCCAAGTGGCCGGA
TGGATGTTTCTCTCTGAGAACTACACGGACATGGAGTGGAGTCGTGACGAGCCTCACTCCGAAGCCGAGTTCTTT
TCGCTCTCCTACCGGTATGTGCGGAATCCGGACTACGAATCGAGATGGGACCGTTATACCGCCAGCGTCGGACAG
CCTCAGCTGGCCGGCTTCTACGGCAAGAAGAGCGATTGCAACTCCAAGAAGCCGTGGATGGATTACCCGCTCGAG
GTCCCGTCGAGGTTGATCAAGTACGCGCATCAGTTCATGAGACCGCTGGCGGAAGTCATGGGCACAGACCACTTT
TTCAGATTGTTCTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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