Protein ID | Hirsu2|6707 |
Gene name | |
Location | Contig_353:5484..6324 |
Strand | - |
Gene length (bp) | 840 |
Transcript length (bp) | 840 |
Coding sequence length (bp) | 840 |
Protein length (aa) | 280 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 6.0E-27 | 58 | 235 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P43528|E2BA_ECOLX | Heat-labile enterotoxin IIB, A chain OS=Escherichia coli PE=1 SV=2 | 59 | 217 | 7.0E-17 |
sp|P13810|E2AA_ECOLX | Heat-labile enterotoxin IIA, A chain OS=Escherichia coli PE=3 SV=1 | 59 | 191 | 2.0E-15 |
sp|A2PU44|CHELT_VIBCL | NAD(+)--arginine ADP-ribosyltransferase Chelt OS=Vibrio cholerae GN=A51_B1772 PE=1 SV=1 | 59 | 203 | 3.0E-14 |
sp|P01555|CHTA_VIBCH | Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1 | 58 | 231 | 1.0E-12 |
sp|P43530|ELAH_ECOH1 | Heat-labile enterotoxin A chain OS=Escherichia coli O78:H11 (strain H10407 / ETEC) GN=eltA PE=3 SV=1 | 58 | 231 | 4.0E-11 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P43528|E2BA_ECOLX | Heat-labile enterotoxin IIB, A chain OS=Escherichia coli PE=1 SV=2 | 59 | 217 | 7.0E-17 |
sp|P13810|E2AA_ECOLX | Heat-labile enterotoxin IIA, A chain OS=Escherichia coli PE=3 SV=1 | 59 | 191 | 2.0E-15 |
sp|A2PU44|CHELT_VIBCL | NAD(+)--arginine ADP-ribosyltransferase Chelt OS=Vibrio cholerae GN=A51_B1772 PE=1 SV=1 | 59 | 203 | 3.0E-14 |
sp|P01555|CHTA_VIBCH | Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1 | 58 | 231 | 1.0E-12 |
sp|P43530|ELAH_ECOH1 | Heat-labile enterotoxin A chain OS=Escherichia coli O78:H11 (strain H10407 / ETEC) GN=eltA PE=3 SV=1 | 58 | 231 | 4.0E-11 |
sp|P06717|ELAP_ECOLX | Heat-labile enterotoxin A chain OS=Escherichia coli GN=eltA PE=1 SV=1 | 58 | 231 | 5.0E-11 |
GO Term | Description | Terminal node |
---|---|---|
GO:0090729 | toxin activity | Yes |
GO:0005615 | extracellular space | Yes |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
GO:0110165 | cellular anatomical entity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1987 | 0.1015 | 0.8663 | 0.0934 | 0.1014 | 0.0282 | 0.4365 | 0.3005 | 0.2984 | 0.0056 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 25 | 0.999523 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 12 | 34 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 302 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6707 MSSTHTRWAFRAVSLFLCLFFWASGCSALPATLVRESNTKQPQALHARESALKLPSVVYRGDGRDPSRIKEAGGF LPHSQYPPLSELAFSVYNHVLDIIVDQNTRERNTIYVSTSSVFGIAAMFASNRTGGGWLYDISAAPNMISVEGTL LEESPFPEESEYAAIGGINWSQVAGWMFLSENYTDMEWSRDEPHSEAEFFSLSYRYVRNPDYESRWDRYTASVGQ PQLAGFYGKKSDCNSKKPWMDYPLEVPSRLIKYAHQFMRPLAEVMGTDHFFRLF* |
Coding | >Hirsu2|6707 ATGTCCTCGACACATACACGATGGGCCTTCCGGGCCGTGTCTTTGTTCCTGTGTCTGTTCTTCTGGGCGAGCGGC TGCTCAGCTCTTCCCGCGACTCTCGTGCGGGAGTCGAATACCAAACAGCCGCAGGCTCTACATGCCAGAGAAAGT GCGCTGAAGCTGCCGTCCGTGGTATACCGCGGCGACGGCAGAGACCCGAGCAGGATCAAAGAGGCGGGCGGCTTC CTGCCGCATTCCCAGTACCCTCCTCTGTCGGAGCTCGCGTTCAGCGTCTACAACCACGTGCTCGACATCATCGTC GATCAAAACACAAGGGAGAGAAATACGATCTATGTGTCGACGTCGTCGGTCTTCGGCATCGCGGCCATGTTCGCC TCCAATCGTACCGGCGGCGGCTGGCTGTACGACATTTCTGCGGCGCCCAATATGATCTCGGTCGAGGGCACACTG CTGGAAGAGAGCCCATTTCCGGAAGAGTCCGAGTACGCGGCCATCGGGGGCATCAACTGGTCCCAAGTGGCCGGA TGGATGTTTCTCTCTGAGAACTACACGGACATGGAGTGGAGTCGTGACGAGCCTCACTCCGAAGCCGAGTTCTTT TCGCTCTCCTACCGGTATGTGCGGAATCCGGACTACGAATCGAGATGGGACCGTTATACCGCCAGCGTCGGACAG CCTCAGCTGGCCGGCTTCTACGGCAAGAAGAGCGATTGCAACTCCAAGAAGCCGTGGATGGATTACCCGCTCGAG GTCCCGTCGAGGTTGATCAAGTACGCGCATCAGTTCATGAGACCGCTGGCGGAAGTCATGGGCACAGACCACTTT TTCAGATTGTTCTAG |
Transcript | >Hirsu2|6707 ATGTCCTCGACACATACACGATGGGCCTTCCGGGCCGTGTCTTTGTTCCTGTGTCTGTTCTTCTGGGCGAGCGGC TGCTCAGCTCTTCCCGCGACTCTCGTGCGGGAGTCGAATACCAAACAGCCGCAGGCTCTACATGCCAGAGAAAGT GCGCTGAAGCTGCCGTCCGTGGTATACCGCGGCGACGGCAGAGACCCGAGCAGGATCAAAGAGGCGGGCGGCTTC CTGCCGCATTCCCAGTACCCTCCTCTGTCGGAGCTCGCGTTCAGCGTCTACAACCACGTGCTCGACATCATCGTC GATCAAAACACAAGGGAGAGAAATACGATCTATGTGTCGACGTCGTCGGTCTTCGGCATCGCGGCCATGTTCGCC TCCAATCGTACCGGCGGCGGCTGGCTGTACGACATTTCTGCGGCGCCCAATATGATCTCGGTCGAGGGCACACTG CTGGAAGAGAGCCCATTTCCGGAAGAGTCCGAGTACGCGGCCATCGGGGGCATCAACTGGTCCCAAGTGGCCGGA TGGATGTTTCTCTCTGAGAACTACACGGACATGGAGTGGAGTCGTGACGAGCCTCACTCCGAAGCCGAGTTCTTT TCGCTCTCCTACCGGTATGTGCGGAATCCGGACTACGAATCGAGATGGGACCGTTATACCGCCAGCGTCGGACAG CCTCAGCTGGCCGGCTTCTACGGCAAGAAGAGCGATTGCAACTCCAAGAAGCCGTGGATGGATTACCCGCTCGAG GTCCCGTCGAGGTTGATCAAGTACGCGCATCAGTTCATGAGACCGCTGGCGGAAGTCATGGGCACAGACCACTTT TTCAGATTGTTCTAG |
Gene | >Hirsu2|6707 ATGTCCTCGACACATACACGATGGGCCTTCCGGGCCGTGTCTTTGTTCCTGTGTCTGTTCTTCTGGGCGAGCGGC TGCTCAGCTCTTCCCGCGACTCTCGTGCGGGAGTCGAATACCAAACAGCCGCAGGCTCTACATGCCAGAGAAAGT GCGCTGAAGCTGCCGTCCGTGGTATACCGCGGCGACGGCAGAGACCCGAGCAGGATCAAAGAGGCGGGCGGCTTC CTGCCGCATTCCCAGTACCCTCCTCTGTCGGAGCTCGCGTTCAGCGTCTACAACCACGTGCTCGACATCATCGTC GATCAAAACACAAGGGAGAGAAATACGATCTATGTGTCGACGTCGTCGGTCTTCGGCATCGCGGCCATGTTCGCC TCCAATCGTACCGGCGGCGGCTGGCTGTACGACATTTCTGCGGCGCCCAATATGATCTCGGTCGAGGGCACACTG CTGGAAGAGAGCCCATTTCCGGAAGAGTCCGAGTACGCGGCCATCGGGGGCATCAACTGGTCCCAAGTGGCCGGA TGGATGTTTCTCTCTGAGAACTACACGGACATGGAGTGGAGTCGTGACGAGCCTCACTCCGAAGCCGAGTTCTTT TCGCTCTCCTACCGGTATGTGCGGAATCCGGACTACGAATCGAGATGGGACCGTTATACCGCCAGCGTCGGACAG CCTCAGCTGGCCGGCTTCTACGGCAAGAAGAGCGATTGCAACTCCAAGAAGCCGTGGATGGATTACCCGCTCGAG GTCCCGTCGAGGTTGATCAAGTACGCGCATCAGTTCATGAGACCGCTGGCGGAAGTCATGGGCACAGACCACTTT TTCAGATTGTTCTAG |