Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6705
Gene name
LocationContig_352:20302..21915
Strand+
Gene length (bp)1613
Transcript length (bp)1386
Coding sequence length (bp)1386
Protein length (aa) 462

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03619 Solute_trans_a Organic solute transporter Ostalpha 1.7E-70 33 308

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q6ZMB5|T184A_HUMAN Transmembrane protein 184A OS=Homo sapiens GN=TMEM184A PE=2 SV=1 14 337 5.0E-27
sp|Q6GQE1|T184C_XENLA Transmembrane protein 184C OS=Xenopus laevis GN=tmem184c PE=2 SV=1 29 314 3.0E-25
sp|Q28CV2|T184C_XENTR Transmembrane protein 184C OS=Xenopus tropicalis GN=tmem184c PE=2 SV=1 29 314 4.0E-25
sp|Q54PI4|T1841_DICDI Transmembrane protein 184 homolog DDB_G0284525 OS=Dictyostelium discoideum GN=tmem184A PE=3 SV=1 35 312 5.0E-24
sp|Q1RMW2|T184A_BOVIN Transmembrane protein 184A OS=Bos taurus GN=TMEM184A PE=2 SV=1 14 337 9.0E-24
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Swissprot ID Swissprot Description Start End E-value
sp|Q6ZMB5|T184A_HUMAN Transmembrane protein 184A OS=Homo sapiens GN=TMEM184A PE=2 SV=1 14 337 5.0E-27
sp|Q6GQE1|T184C_XENLA Transmembrane protein 184C OS=Xenopus laevis GN=tmem184c PE=2 SV=1 29 314 3.0E-25
sp|Q28CV2|T184C_XENTR Transmembrane protein 184C OS=Xenopus tropicalis GN=tmem184c PE=2 SV=1 29 314 4.0E-25
sp|Q54PI4|T1841_DICDI Transmembrane protein 184 homolog DDB_G0284525 OS=Dictyostelium discoideum GN=tmem184A PE=3 SV=1 35 312 5.0E-24
sp|Q1RMW2|T184A_BOVIN Transmembrane protein 184A OS=Bos taurus GN=TMEM184A PE=2 SV=1 14 337 9.0E-24
sp|Q9NVA4|T184C_HUMAN Transmembrane protein 184C OS=Homo sapiens GN=TMEM184C PE=2 SV=2 23 411 1.0E-23
sp|Q5RET6|T184C_PONAB Transmembrane protein 184C OS=Pongo abelii GN=TMEM184C PE=2 SV=1 23 411 1.0E-23
sp|Q17QL9|T184C_BOVIN Transmembrane protein 184C OS=Bos taurus GN=TMEM184C PE=2 SV=1 23 450 2.0E-23
sp|Q54WM0|T1843_DICDI Transmembrane protein 184 homolog DDB_G0279555 OS=Dictyostelium discoideum GN=tmem184C PE=3 SV=1 34 323 2.0E-23
sp|Q3UFJ6|T184A_MOUSE Transmembrane protein 184A OS=Mus musculus GN=Tmem184a PE=2 SV=1 14 337 4.0E-23
sp|F4JTN2|LAZ1_ARATH Protein LAZ1 OS=Arabidopsis thaliana GN=LAZ1 PE=1 SV=1 35 308 4.0E-23
sp|Q4QQS1|T184A_RAT Transmembrane protein 184A OS=Rattus norvegicus GN=Tmem184a PE=2 SV=1 14 337 1.0E-22
sp|Q5ZMP3|T184C_CHICK Transmembrane protein 184C OS=Gallus gallus GN=TMEM184C PE=2 SV=1 23 395 1.0E-22
sp|A2VDL9|T184B_BOVIN Transmembrane protein 184B OS=Bos taurus GN=TMEM184B PE=2 SV=1 43 331 3.0E-22
sp|Q9Y519|T184B_HUMAN Transmembrane protein 184B OS=Homo sapiens GN=TMEM184B PE=1 SV=2 43 331 4.0E-22
sp|Q8BG09|T184B_MOUSE Transmembrane protein 184B OS=Mus musculus GN=Tmem184b PE=2 SV=1 43 331 3.0E-21
sp|Q3TPR7|T184C_MOUSE Transmembrane protein 184C OS=Mus musculus GN=Tmem184c PE=2 SV=1 28 314 3.0E-21
sp|Q810F5|T184C_RAT Transmembrane protein 184C OS=Rattus norvegicus GN=Tmem184c PE=2 SV=1 29 314 2.0E-20
sp|Q75JN3|T1842_DICDI Transmembrane protein 184 homolog DDB_G0276041 OS=Dictyostelium discoideum GN=tmem184B PE=3 SV=1 31 311 7.0E-20
sp|Q94CA0|LAZH1_ARATH Protein LAZ1 homolog 1 OS=Arabidopsis thaliana GN=At1g77220 PE=2 SV=1 40 308 7.0E-19
sp|Q5BPZ5|LAZH2_ARATH Protein LAZ1 homolog 2 OS=Arabidopsis thaliana GN=At1g23070 PE=2 SV=1 27 308 4.0E-16
sp|Q09906|TM184_SCHPO Transmembrane protein 184 homolog C30D11.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC30D11.06c PE=1 SV=1 42 451 5.0E-15
sp|P36142|TM184_YEAST Transmembrane protein 184 homolog YKR051W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKR051W PE=1 SV=1 39 310 1.0E-09
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 31 0.5

Transmembrane Domains

Domain # Start End Length
1 31 53 22
2 66 88 22
3 103 122 19
4 174 191 17
5 201 223 22
6 244 266 22
7 281 303 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6705
MQQQCNETLEELLVTRGHEAVIVWSLTFHDLACIIAAGSTLLAVVITLYHIWTHALNYSHPLEQRFIIRILFLVP
IYAVSSFLQVQWVHYGTYFKIVSDCYEAFAIASFFALLCSYVAPDLHGQKAWFREMRPVKPWAFPISLFAKCCCG
QRGPCRTPSGFGWFNVIWTGIYNYCFIRVVMTISAVVAHFFHRFCEVSLSAAFAHLWYLIINGLAANVAIFCLAQ
FCVQLSKTLKEHNIFIKTVAIKLVVFLPFFQFLAISIATSTFLHPTRVIDFPDLKIGIPALLQCVEMACFSVLNL
WAFPYTPYVAEAPETLYPSPDPNRSFPERVNERQPPKGGFLGLRAIWDAVNVWDVVKDFGRGARLMFCGARHERR
KARLESVNYDSIDLTTLPGSKGRAAEHETLPRGPQGAALKHQGSASDMGRLVDDAQANPQTNLYRGFPSPPGRRP
STVDEHFIKQS*
Coding >Hirsu2|6705
ATGCAGCAACAGTGCAACGAGACGCTCGAGGAGCTCTTGGTCACGCGTGGCCATGAAGCCGTCATCGTCTGGTCC
TTGACGTTCCACGATCTCGCTTGCATCATCGCGGCCGGAAGCACTCTCCTGGCCGTCGTCATCACCCTTTATCAT
ATCTGGACGCATGCCCTGAACTACTCTCACCCACTCGAGCAGCGGTTCATCATCCGCATTCTCTTCCTGGTGCCC
ATCTACGCCGTCTCGTCCTTCCTGCAGGTGCAGTGGGTTCACTACGGCACCTACTTCAAGATCGTGTCCGACTGC
TACGAGGCCTTCGCCATCGCCTCCTTCTTCGCCCTCCTGTGCTCCTACGTCGCGCCCGACCTCCACGGGCAGAAG
GCCTGGTTCCGCGAGATGCGCCCGGTCAAGCCGTGGGCCTTCCCCATCAGCCTGTTCGCCAAGTGCTGCTGCGGC
CAGAGGGGCCCCTGCAGGACGCCGAGCGGGTTCGGCTGGTTCAACGTGATATGGACCGGCATCTACAACTACTGC
TTCATCCGCGTCGTCATGACCATCTCGGCCGTGGTGGCACACTTCTTCCACCGGTTCTGCGAAGTCTCCCTCAGT
GCCGCCTTTGCTCACTTGTGGTACTTGATCATCAATGGTCTCGCGGCCAATGTTGCCATTTTTTGCCTCGCGCAG
TTCTGTGTACAGCTCAGCAAGACGTTGAAAGAACACAACATCTTCATCAAGACGGTGGCCATCAAACTCGTCGTC
TTCCTGCCCTTCTTCCAATTCCTCGCCATCTCCATCGCGACATCTACCTTTCTTCACCCGACCCGCGTCATCGAC
TTTCCGGATCTCAAGATCGGCATCCCGGCGCTTCTCCAATGCGTCGAGATGGCTTGCTTCTCCGTCCTCAACTTG
TGGGCTTTCCCTTACACTCCGTACGTGGCCGAGGCACCTGAGACTCTGTACCCCAGCCCGGACCCGAACAGATCC
TTTCCGGAGCGGGTCAACGAGCGCCAGCCGCCCAAGGGAGGCTTCCTCGGCCTCCGGGCCATATGGGACGCCGTC
AACGTGTGGGACGTCGTCAAGGACTTCGGCCGGGGCGCCCGTCTGATGTTCTGCGGCGCGAGGCACGAGAGGCGG
AAAGCCCGGCTCGAGTCGGTCAACTACGACTCGATTGATTTGACCACCCTGCCCGGGAGCAAGGGACGTGCCGCC
GAGCACGAGACACTGCCGCGTGGGCCGCAGGGTGCTGCTCTGAAGCATCAGGGCAGCGCCAGCGACATGGGTAGG
CTTGTGGATGATGCTCAAGCCAACCCACAGACAAACTTGTACCGCGGATTCCCCTCGCCACCAGGACGACGTCCT
TCGACCGTGGATGAGCATTTCATTAAGCAAAGCTAG
Transcript >Hirsu2|6705
ATGCAGCAACAGTGCAACGAGACGCTCGAGGAGCTCTTGGTCACGCGTGGCCATGAAGCCGTCATCGTCTGGTCC
TTGACGTTCCACGATCTCGCTTGCATCATCGCGGCCGGAAGCACTCTCCTGGCCGTCGTCATCACCCTTTATCAT
ATCTGGACGCATGCCCTGAACTACTCTCACCCACTCGAGCAGCGGTTCATCATCCGCATTCTCTTCCTGGTGCCC
ATCTACGCCGTCTCGTCCTTCCTGCAGGTGCAGTGGGTTCACTACGGCACCTACTTCAAGATCGTGTCCGACTGC
TACGAGGCCTTCGCCATCGCCTCCTTCTTCGCCCTCCTGTGCTCCTACGTCGCGCCCGACCTCCACGGGCAGAAG
GCCTGGTTCCGCGAGATGCGCCCGGTCAAGCCGTGGGCCTTCCCCATCAGCCTGTTCGCCAAGTGCTGCTGCGGC
CAGAGGGGCCCCTGCAGGACGCCGAGCGGGTTCGGCTGGTTCAACGTGATATGGACCGGCATCTACAACTACTGC
TTCATCCGCGTCGTCATGACCATCTCGGCCGTGGTGGCACACTTCTTCCACCGGTTCTGCGAAGTCTCCCTCAGT
GCCGCCTTTGCTCACTTGTGGTACTTGATCATCAATGGTCTCGCGGCCAATGTTGCCATTTTTTGCCTCGCGCAG
TTCTGTGTACAGCTCAGCAAGACGTTGAAAGAACACAACATCTTCATCAAGACGGTGGCCATCAAACTCGTCGTC
TTCCTGCCCTTCTTCCAATTCCTCGCCATCTCCATCGCGACATCTACCTTTCTTCACCCGACCCGCGTCATCGAC
TTTCCGGATCTCAAGATCGGCATCCCGGCGCTTCTCCAATGCGTCGAGATGGCTTGCTTCTCCGTCCTCAACTTG
TGGGCTTTCCCTTACACTCCGTACGTGGCCGAGGCACCTGAGACTCTGTACCCCAGCCCGGACCCGAACAGATCC
TTTCCGGAGCGGGTCAACGAGCGCCAGCCGCCCAAGGGAGGCTTCCTCGGCCTCCGGGCCATATGGGACGCCGTC
AACGTGTGGGACGTCGTCAAGGACTTCGGCCGGGGCGCCCGTCTGATGTTCTGCGGCGCGAGGCACGAGAGGCGG
AAAGCCCGGCTCGAGTCGGTCAACTACGACTCGATTGATTTGACCACCCTGCCCGGGAGCAAGGGACGTGCCGCC
GAGCACGAGACACTGCCGCGTGGGCCGCAGGGTGCTGCTCTGAAGCATCAGGGCAGCGCCAGCGACATGGGTAGG
CTTGTGGATGATGCTCAAGCCAACCCACAGACAAACTTGTACCGCGGATTCCCCTCGCCACCAGGACGACGTCCT
TCGACCGTGGATGAGCATTTCATTAAGCAAAGCTAG
Gene >Hirsu2|6705
ATGCAGCAACAGTGCAACGAGACGCTCGAGGAGCTCTTGGGTAGGAGTGGCCGCCCTGTGCTCTATAATCACGTA
CCGGACGCCATGCGCGTGCGGGCGGAGTTGGGCGGAAGAGGCTGACCGAGGACGATGTAGTCACGCGTGGCCATG
AAGCCGTCATCGTCTGGTCCTTGACGTTCCACGATCTCGCTTGCATCATCGCGGCCGGAAGCACTCTCCTGGCCG
TCGTCATCACCCTTTATCATATCTGGACGCATGCCCTGAACTACTCTCACCCACTCGAGCAGCGGTTGTAAGTCA
CGGGCCTCGACGTCCTTTTCCTCGATCCAACGAGCTGACCGAGTTGCCACGGAGCGCAGCATCATCCGCATTCTC
TTCCTGGTGCCCATCTACGCCGTCTCGTCCTTCCTGCAGGTGCAGTGGGTTCACTACGGCACCTACTTCAAGATC
GTGTCCGACTGCTACGAGGCCTTCGCCATCGCCTCCTTCTTCGCCCTCCTGTGCTCCTACGTCGCGCCCGACCTC
CACGGGCAGAAGGCCTGGTTCCGCGAGATGCGCCCGGTCAAGCCGTGGGCCTTCCCCATCAGCCTGTTCGCCAAG
TGCTGCTGCGGCCAGAGGGGCCCCTGCAGGACGCCGAGCGGGTTCGGCTGGTTCAACGTGATATGGACCGGCATC
TACAACTACTGCTTCATCCGCGTCGTCATGACCATCTCGGCCGTGGTGGCACACTTCTTCCACCGGTTCTGCGAA
GTCTCCCTCAGTGCCGCCTTTGCTCACTTGTGGGTGCGTTGCCCCCCCTTTCCCGGACCGCGATTCGTCTGCTGA
CAAGGTCCAACCCGACGAGACAGTACTTGATCATCAATGGTCTCGCGGCCAATGTTGCCATTTTTTGCCTCGCGC
AGTTCTGTGTACAGCTCAGCAAGACGTTGAAAGAACACAACATCTTCATCAAGACGGTGGCCATCAAACTCGTCG
TCTTCCTGCCCTTCTTCCAATTCCTCGCCATCTCCATCGCGACATCTACCTTTCTTCACCCGACCCGCGTCATCG
ACTTTCCGGATCTCAAGATCGGCATCCCGGCGCTTCTCCAATGCGTCGAGATGGCTTGCTTCTCCGTCCTCAACT
TGTGGGCTTTCCCTTACACTCCGTACGTGGCCGAGGCACCTGAGACTCTGTACCCCAGCCCGGACCCGAACAGAT
CCTTTCCGGAGCGGGTCAACGAGCGCCAGCCGCCCAAGGGAGGCTTCCTCGGCCTCCGGGCCATATGGGACGCCG
TCAACGTGTGGGACGTCGTCAAGGACTTCGGCCGGGGCGCCCGTCTGATGTTCTGCGGCGCGAGGCACGAGAGGC
GGAAAGCCCGGCTCGAGTCGGTCAACTACGACTCGATTGATTTGACCACCCTGCCCGGGAGCAAGGGACGTGCCG
CCGAGCACGAGACACTGCCGCGTGGGCCGCAGGGTGCTGCTCTGAAGCATCAGGGCAGCGCCAGCGACATGGGTA
GGCTTGTGGATGATGCTCAAGCCAACCCACAGACAAACTTGTACCGCGGATTCCCCTCGCCACCAGGACGACGTC
CTTCGACCGTGGATGAGCATTTCATTAAGCAAAGCTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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