Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6697
Gene name
LocationContig_351:14042..14552
Strand+
Gene length (bp)510
Transcript length (bp)399
Coding sequence length (bp)399
Protein length (aa) 133

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09044 Kp4 Kp4 2.0E-26 7 119

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q90121|KP4T_UMV4 KP4 killer toxin OS=Ustilago maydis P4 virus GN=M2A PE=1 SV=1 15 119 9.0E-11

GO

GO Term Description Terminal node
GO:0005576 extracellular region Yes
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6697
MQLAPFLLLVSGAAALGINCRGHGICKVNDASLQSIRDQVGVMMAEGARDKVFQSYQPIACARGTRGSICAYYQH
GAFGKATDVYKQLHTLLDHGCNQCGSVPTKPGNDVAYGELTINYSPKPCCDGNCYCK*
Coding >Hirsu2|6697
ATGCAACTCGCCCCTTTCCTGCTGCTCGTCTCCGGCGCCGCCGCGCTGGGGATCAACTGCCGCGGCCACGGCATC
TGCAAGGTCAACGACGCCTCCCTCCAGTCCATCCGGGACCAGGTCGGCGTCATGATGGCCGAAGGAGCGCGCGAC
AAGGTCTTCCAAAGCTACCAGCCCATAGCCTGCGCGCGCGGAACCCGCGGCAGCATCTGCGCCTACTACCAGCAT
GGCGCCTTCGGCAAGGCCACGGACGTCTACAAGCAGCTGCACACGCTCCTCGACCACGGCTGCAACCAGTGCGGC
AGCGTGCCGACCAAGCCCGGCAACGACGTCGCCTACGGCGAGCTGACCATCAACTACTCGCCCAAGCCGTGCTGC
GACGGTAACTGCTACTGTAAGTAG
Transcript >Hirsu2|6697
ATGCAACTCGCCCCTTTCCTGCTGCTCGTCTCCGGCGCCGCCGCGCTGGGGATCAACTGCCGCGGCCACGGCATC
TGCAAGGTCAACGACGCCTCCCTCCAGTCCATCCGGGACCAGGTCGGCGTCATGATGGCCGAAGGAGCGCGCGAC
AAGGTCTTCCAAAGCTACCAGCCCATAGCCTGCGCGCGCGGAACCCGCGGCAGCATCTGCGCCTACTACCAGCAT
GGCGCCTTCGGCAAGGCCACGGACGTCTACAAGCAGCTGCACACGCTCCTCGACCACGGCTGCAACCAGTGCGGC
AGCGTGCCGACCAAGCCCGGCAACGACGTCGCCTACGGCGAGCTGACCATCAACTACTCGCCCAAGCCGTGCTGC
GACGGTAACTGCTACTGTAAGTAG
Gene >Hirsu2|6697
ATGCAACTCGCCCCTTTCCTGCTGCTCGTCTCCGGCGCCGCCGCGCTGGGGATCAACTGCCGCGGCCACGGCATC
TGCAAGGTCAACGACGCCTCCCTCCAGTCCATCCGGGACCAGGTCGGCGTCATGATGGCCGAAGGAGCGCGCGAC
AAGGTCTTCCAAAGCTACCGTGAGCGCCCCCCCCCCCCCCGGTGTTCGTGCGAGTGTCGAAGCGGAGGAGGAGCA
CGAGGAGAAGAGGCGAAGCCCGTATAGGTAACGGCCGACTGACCTCAAAGTGCAGAGCCCATAGCCTGCGCGCGC
GGAACCCGCGGCAGCATCTGCGCCTACTACCAGCATGGCGCCTTCGGCAAGGCCACGGACGTCTACAAGCAGCTG
CACACGCTCCTCGACCACGGCTGCAACCAGTGCGGCAGCGTGCCGACCAAGCCCGGCAACGACGTCGCCTACGGC
GAGCTGACCATCAACTACTCGCCCAAGCCGTGCTGCGACGGTAACTGCTACTGTAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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