Protein ID | Hirsu2|6697 |
Gene name | |
Location | Contig_351:14042..14552 |
Strand | + |
Gene length (bp) | 510 |
Transcript length (bp) | 399 |
Coding sequence length (bp) | 399 |
Protein length (aa) | 133 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF09044 | Kp4 | Kp4 | 2.0E-26 | 7 | 119 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q90121|KP4T_UMV4 | KP4 killer toxin OS=Ustilago maydis P4 virus GN=M2A PE=1 SV=1 | 15 | 119 | 9.0E-11 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005576 | extracellular region | Yes |
GO:0005575 | cellular_component | No |
GO:0110165 | cellular anatomical entity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0511 | 0.0468 | 0.9288 | 0.0661 | 0.0635 | 0.0044 | 0.0414 | 0.1031 | 0.0275 | 0.0041 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 15 | 0.999682 |
Orthofinder run ID | 4 |
Orthogroup | 386 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6697 MQLAPFLLLVSGAAALGINCRGHGICKVNDASLQSIRDQVGVMMAEGARDKVFQSYQPIACARGTRGSICAYYQH GAFGKATDVYKQLHTLLDHGCNQCGSVPTKPGNDVAYGELTINYSPKPCCDGNCYCK* |
Coding | >Hirsu2|6697 ATGCAACTCGCCCCTTTCCTGCTGCTCGTCTCCGGCGCCGCCGCGCTGGGGATCAACTGCCGCGGCCACGGCATC TGCAAGGTCAACGACGCCTCCCTCCAGTCCATCCGGGACCAGGTCGGCGTCATGATGGCCGAAGGAGCGCGCGAC AAGGTCTTCCAAAGCTACCAGCCCATAGCCTGCGCGCGCGGAACCCGCGGCAGCATCTGCGCCTACTACCAGCAT GGCGCCTTCGGCAAGGCCACGGACGTCTACAAGCAGCTGCACACGCTCCTCGACCACGGCTGCAACCAGTGCGGC AGCGTGCCGACCAAGCCCGGCAACGACGTCGCCTACGGCGAGCTGACCATCAACTACTCGCCCAAGCCGTGCTGC GACGGTAACTGCTACTGTAAGTAG |
Transcript | >Hirsu2|6697 ATGCAACTCGCCCCTTTCCTGCTGCTCGTCTCCGGCGCCGCCGCGCTGGGGATCAACTGCCGCGGCCACGGCATC TGCAAGGTCAACGACGCCTCCCTCCAGTCCATCCGGGACCAGGTCGGCGTCATGATGGCCGAAGGAGCGCGCGAC AAGGTCTTCCAAAGCTACCAGCCCATAGCCTGCGCGCGCGGAACCCGCGGCAGCATCTGCGCCTACTACCAGCAT GGCGCCTTCGGCAAGGCCACGGACGTCTACAAGCAGCTGCACACGCTCCTCGACCACGGCTGCAACCAGTGCGGC AGCGTGCCGACCAAGCCCGGCAACGACGTCGCCTACGGCGAGCTGACCATCAACTACTCGCCCAAGCCGTGCTGC GACGGTAACTGCTACTGTAAGTAG |
Gene | >Hirsu2|6697 ATGCAACTCGCCCCTTTCCTGCTGCTCGTCTCCGGCGCCGCCGCGCTGGGGATCAACTGCCGCGGCCACGGCATC TGCAAGGTCAACGACGCCTCCCTCCAGTCCATCCGGGACCAGGTCGGCGTCATGATGGCCGAAGGAGCGCGCGAC AAGGTCTTCCAAAGCTACCGTGAGCGCCCCCCCCCCCCCCGGTGTTCGTGCGAGTGTCGAAGCGGAGGAGGAGCA CGAGGAGAAGAGGCGAAGCCCGTATAGGTAACGGCCGACTGACCTCAAAGTGCAGAGCCCATAGCCTGCGCGCGC GGAACCCGCGGCAGCATCTGCGCCTACTACCAGCATGGCGCCTTCGGCAAGGCCACGGACGTCTACAAGCAGCTG CACACGCTCCTCGACCACGGCTGCAACCAGTGCGGCAGCGTGCCGACCAAGCCCGGCAACGACGTCGCCTACGGC GAGCTGACCATCAACTACTCGCCCAAGCCGTGCTGCGACGGTAACTGCTACTGTAAGTAG |