Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6696
Gene name
LocationContig_351:11986..12376
Strand+
Gene length (bp)390
Transcript length (bp)390
Coding sequence length (bp)390
Protein length (aa) 130

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09044 Kp4 Kp4 2.6E-26 8 118

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005576 extracellular region Yes
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.059 0.049 0.9444 0.0897 0.0674 0.0063 0.048 0.0794 0.0235 0.0046

SignalP

SignalP signal predicted Location Score
Yes 1 - 18 0.999684

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup386
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7548
Ophiocordyceps australis map64 (Brazil) OphauB2|1409
Ophiocordyceps australis map64 (Brazil) OphauB2|1410
Ophiocordyceps australis map64 (Brazil) OphauB2|1411
Ophiocordyceps subramaniannii Hirsu2|1492
Ophiocordyceps subramaniannii Hirsu2|6695
Ophiocordyceps subramaniannii Hirsu2|6696 (this protein)
Ophiocordyceps subramaniannii Hirsu2|6697

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6696
MQLSAGSVLAALAATASGLGTNCHGSDACHSLAAAGNIQNLKAIVDNIQPRSRFYESGKQIACTGSLCAYYQNGA
HGNVDQISRHLQALLNSGCRKCGSLPTKPGSNDVSRGELKVDILAKPGCQGACL*
Coding >Hirsu2|6696
ATGCAGCTCTCGGCCGGCTCCGTCCTGGCCGCGCTGGCGGCGACGGCCTCGGGCCTGGGCACCAACTGCCACGGG
TCGGACGCGTGCCACTCGCTGGCGGCGGCCGGCAACATCCAGAACCTCAAGGCCATCGTCGACAACATCCAGCCG
CGCAGCCGGTTCTACGAGTCCGGCAAGCAGATCGCCTGCACCGGCTCGCTGTGCGCCTACTACCAGAACGGCGCC
CACGGCAACGTCGACCAGATCTCGCGCCACCTGCAGGCCCTCCTCAACAGCGGCTGCCGGAAGTGCGGCTCCCTG
CCGACCAAGCCCGGCTCCAACGACGTCAGCCGCGGCGAGCTCAAGGTCGACATCCTGGCCAAGCCCGGCTGCCAG
GGCGCCTGCCTCTGA
Transcript >Hirsu2|6696
ATGCAGCTCTCGGCCGGCTCCGTCCTGGCCGCGCTGGCGGCGACGGCCTCGGGCCTGGGCACCAACTGCCACGGG
TCGGACGCGTGCCACTCGCTGGCGGCGGCCGGCAACATCCAGAACCTCAAGGCCATCGTCGACAACATCCAGCCG
CGCAGCCGGTTCTACGAGTCCGGCAAGCAGATCGCCTGCACCGGCTCGCTGTGCGCCTACTACCAGAACGGCGCC
CACGGCAACGTCGACCAGATCTCGCGCCACCTGCAGGCCCTCCTCAACAGCGGCTGCCGGAAGTGCGGCTCCCTG
CCGACCAAGCCCGGCTCCAACGACGTCAGCCGCGGCGAGCTCAAGGTCGACATCCTGGCCAAGCCCGGCTGCCAG
GGCGCCTGCCTCTGA
Gene >Hirsu2|6696
ATGCAGCTCTCGGCCGGCTCCGTCCTGGCCGCGCTGGCGGCGACGGCCTCGGGCCTGGGCACCAACTGCCACGGG
TCGGACGCGTGCCACTCGCTGGCGGCGGCCGGCAACATCCAGAACCTCAAGGCCATCGTCGACAACATCCAGCCG
CGCAGCCGGTTCTACGAGTCCGGCAAGCAGATCGCCTGCACCGGCTCGCTGTGCGCCTACTACCAGAACGGCGCC
CACGGCAACGTCGACCAGATCTCGCGCCACCTGCAGGCCCTCCTCAACAGCGGCTGCCGGAAGTGCGGCTCCCTG
CCGACCAAGCCCGGCTCCAACGACGTCAGCCGCGGCGAGCTCAAGGTCGACATCCTGGCCAAGCCCGGCTGCCAG
GGCGCCTGCCTCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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