Protein ID | Hirsu2|6696 |
Gene name | |
Location | Contig_351:11986..12376 |
Strand | + |
Gene length (bp) | 390 |
Transcript length (bp) | 390 |
Coding sequence length (bp) | 390 |
Protein length (aa) | 130 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF09044 | Kp4 | Kp4 | 2.6E-26 | 8 | 118 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005576 | extracellular region | Yes |
GO:0005575 | cellular_component | No |
GO:0110165 | cellular anatomical entity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.059 | 0.049 | 0.9444 | 0.0897 | 0.0674 | 0.0063 | 0.048 | 0.0794 | 0.0235 | 0.0046 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 18 | 0.999684 |
Orthofinder run ID | 4 |
Orthogroup | 386 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6696 MQLSAGSVLAALAATASGLGTNCHGSDACHSLAAAGNIQNLKAIVDNIQPRSRFYESGKQIACTGSLCAYYQNGA HGNVDQISRHLQALLNSGCRKCGSLPTKPGSNDVSRGELKVDILAKPGCQGACL* |
Coding | >Hirsu2|6696 ATGCAGCTCTCGGCCGGCTCCGTCCTGGCCGCGCTGGCGGCGACGGCCTCGGGCCTGGGCACCAACTGCCACGGG TCGGACGCGTGCCACTCGCTGGCGGCGGCCGGCAACATCCAGAACCTCAAGGCCATCGTCGACAACATCCAGCCG CGCAGCCGGTTCTACGAGTCCGGCAAGCAGATCGCCTGCACCGGCTCGCTGTGCGCCTACTACCAGAACGGCGCC CACGGCAACGTCGACCAGATCTCGCGCCACCTGCAGGCCCTCCTCAACAGCGGCTGCCGGAAGTGCGGCTCCCTG CCGACCAAGCCCGGCTCCAACGACGTCAGCCGCGGCGAGCTCAAGGTCGACATCCTGGCCAAGCCCGGCTGCCAG GGCGCCTGCCTCTGA |
Transcript | >Hirsu2|6696 ATGCAGCTCTCGGCCGGCTCCGTCCTGGCCGCGCTGGCGGCGACGGCCTCGGGCCTGGGCACCAACTGCCACGGG TCGGACGCGTGCCACTCGCTGGCGGCGGCCGGCAACATCCAGAACCTCAAGGCCATCGTCGACAACATCCAGCCG CGCAGCCGGTTCTACGAGTCCGGCAAGCAGATCGCCTGCACCGGCTCGCTGTGCGCCTACTACCAGAACGGCGCC CACGGCAACGTCGACCAGATCTCGCGCCACCTGCAGGCCCTCCTCAACAGCGGCTGCCGGAAGTGCGGCTCCCTG CCGACCAAGCCCGGCTCCAACGACGTCAGCCGCGGCGAGCTCAAGGTCGACATCCTGGCCAAGCCCGGCTGCCAG GGCGCCTGCCTCTGA |
Gene | >Hirsu2|6696 ATGCAGCTCTCGGCCGGCTCCGTCCTGGCCGCGCTGGCGGCGACGGCCTCGGGCCTGGGCACCAACTGCCACGGG TCGGACGCGTGCCACTCGCTGGCGGCGGCCGGCAACATCCAGAACCTCAAGGCCATCGTCGACAACATCCAGCCG CGCAGCCGGTTCTACGAGTCCGGCAAGCAGATCGCCTGCACCGGCTCGCTGTGCGCCTACTACCAGAACGGCGCC CACGGCAACGTCGACCAGATCTCGCGCCACCTGCAGGCCCTCCTCAACAGCGGCTGCCGGAAGTGCGGCTCCCTG CCGACCAAGCCCGGCTCCAACGACGTCAGCCGCGGCGAGCTCAAGGTCGACATCCTGGCCAAGCCCGGCTGCCAG GGCGCCTGCCTCTGA |