© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6693 |
| Gene name | |
| Location | Contig_351:7037..7635 |
| Strand | + |
| Gene length (bp) | 598 |
| Transcript length (bp) | 396 |
| Coding sequence length (bp) | 396 |
| Protein length (aa) | 132 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1858 | 0.1899 | 0.8346 | 0.4271 | 0.1065 | 0.06 | 0.0906 | 0.3585 | 0.2419 | 0.0062 |
| Orthofinder run ID | 4 |
| Orthogroup | 7095 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps australis 1348a (Ghana) | OphauG2|7547 |
| Ophiocordyceps australis map64 (Brazil) | OphauB2|1412 |
| Ophiocordyceps subramaniannii | Hirsu2|6693 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6693 MMKTATWYSAVVASAYMAPSACGEPGASPTPDATGRHRDDRGRSTRCVPTVTVRELQKAEHGCHVDCSGEFCIED RFVTLPCGCRTADHVVTKTTTVCPTAPCWSCHTGFPFTTTADCAGATTTTTTTSGH* |
| Coding | >Hirsu2|6693 ATGATGAAGACGGCTACATGGTACAGTGCCGTCGTGGCCAGCGCGTACATGGCGCCCTCTGCATGCGGAGAGCCT GGCGCGAGCCCGACACCAGACGCAACGGGCCGGCACCGGGACGACCGCGGCCGCAGCACGAGATGCGTCCCGACC GTGACGGTGCGGGAGCTCCAGAAGGCCGAACACGGCTGCCACGTCGACTGCTCCGGCGAGTTCTGCATCGAGGAT CGATTCGTGACGCTGCCGTGCGGGTGCCGAACGGCGGACCATGTCGTCACCAAGACGACGACGGTCTGCCCGACG GCGCCGTGCTGGTCCTGCCACACCGGCTTTCCCTTCACGACGACTGCTGACTGTGCCGGCGCGACGACGACGACG ACGACGACATCCGGGCACTGA |
| Transcript | >Hirsu2|6693 ATGATGAAGACGGCTACATGGTACAGTGCCGTCGTGGCCAGCGCGTACATGGCGCCCTCTGCATGCGGAGAGCCT GGCGCGAGCCCGACACCAGACGCAACGGGCCGGCACCGGGACGACCGCGGCCGCAGCACGAGATGCGTCCCGACC GTGACGGTGCGGGAGCTCCAGAAGGCCGAACACGGCTGCCACGTCGACTGCTCCGGCGAGTTCTGCATCGAGGAT CGATTCGTGACGCTGCCGTGCGGGTGCCGAACGGCGGACCATGTCGTCACCAAGACGACGACGGTCTGCCCGACG GCGCCGTGCTGGTCCTGCCACACCGGCTTTCCCTTCACGACGACTGCTGACTGTGCCGGCGCGACGACGACGACG ACGACGACATCCGGGCACTGA |
| Gene | >Hirsu2|6693 ATGATGAAGACGGCTACATGGTACAGTGCCGTCGTGGCCAGCGCGTACATGTAAGGCCCGACAACAGAACGGCCG AACGACTTGGAGAGGCTGATGCGTCGCCTTGGCAGGGCGCCCTCTGCATGCGGAGAGCCTGGCGGTGAGACGGAT GGCATGAGCGGCGCCAGTCGCCAGGCGTGCTCAACTCCCGGCCGACAACAAGCCGCACTCGGCTGACGCAGCGAC AGCGAGCCCGACACCAGACGCAACGGGCCGGCACCGGGACGACCGCGGCCGCAGCACGAGATGCGTCCCGACCGT GACGGTGCGGGAGCTCCAGAAGGCCGAACACGGCTGCCACGTCGACTGCTCCGGCGAGTTCTGCATCGAGGATCG TAAGCCGTCATGTCGACGCCCGTGCCGTCGAGATGCTGACGGGGGACAAACAGGATTCGTGACGCTGCCGTGCGG GTGCCGAACGGCGGACCATGTCGTCACCAAGACGACGACGGTCTGCCCGACGGCGCCGTGCTGGTCCTGCCACAC CGGCTTTCCCTTCACGACGACTGCTGACTGTGCCGGCGCGACGACGACGACGACGACGACATCCGGGCACTGA |