Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6689
Gene name
LocationContig_350:17131..17883
Strand+
Gene length (bp)752
Transcript length (bp)648
Coding sequence length (bp)648
Protein length (aa) 216

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P40092|SPI1_YEAST Uncharacterized cell wall protein SPI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPI1 PE=2 SV=1 33 101 6.0E-08
sp|Q01302|CCG6_NEUCR Clock-controlled protein 6 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ccg-6 PE=2 SV=2 30 73 6.0E-08
sp|Q01589|SED1_YEAST Cell wall protein SED1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SED1 PE=1 SV=1 33 73 6.0E-08
sp|Q01589|SED1_YEAST Cell wall protein SED1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SED1 PE=1 SV=1 37 75 2.0E-07

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular 0.1044 0.1131 0.598 0.5176 0.0445 0.0026 0.2367 0.1753 0.1113 0.0013

SignalP

SignalP signal predicted Location Score
Yes 1 - 18 0.999667

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup10199
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|6689 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6689
MKFTALLSAAALALGVSGQVVIQPNRTVITTVISTAFTTFCPTPTTLRIGTRTYTITRPTTLTITHCPCTITREH
WHHHHHHHRPGHGGLPIPPPNTRWIPPPPKPSPWVPKGAPPAYPPQQPAQPPAQQPGQKALPVPANPAPANPAPA
PQAPAVPAPAPQSPASPPAAPQSPAGGSQKPAPGTPQVVTTSGADKKSGAGLGSLALAGFAAMLI*
Coding >Hirsu2|6689
ATGAAGTTCACGGCCTTGTTGTCCGCGGCGGCCCTCGCCCTCGGCGTCTCCGGCCAGGTCGTCATCCAGCCCAAC
CGGACTGTCATCACCACCGTCATCTCGACAGCCTTCACCACCTTCTGTCCCACTCCGACCACCCTCCGGATCGGC
ACGCGCACCTACACCATCACCAGGCCCACGACCTTGACCATCACCCACTGCCCTTGCACCATCACCAGGGAGCAT
TGGCACCATCATCACCATCATCATCGTCCTGGCCACGGCGGCTTGCCCATCCCCCCGCCCAACACCCGATGGATT
CCGCCCCCGCCTAAGCCGAGTCCCTGGGTGCCCAAGGGCGCGCCTCCTGCCTACCCGCCTCAGCAGCCCGCTCAG
CCGCCTGCCCAGCAGCCTGGCCAGAAGGCACTGCCTGTTCCCGCGAACCCGGCTCCCGCGAACCCGGCTCCCGCT
CCTCAGGCTCCCGCCGTCCCGGCTCCCGCGCCGCAGTCGCCCGCCAGCCCCCCGGCCGCGCCGCAGTCGCCCGCC
GGCGGCAGCCAGAAGCCCGCCCCCGGCACTCCTCAAGTCGTGACCACTTCCGGCGCCGACAAGAAATCCGGAGCC
GGTCTCGGCTCCCTGGCCCTGGCTGGGTTTGCCGCCATGCTGATTTAG
Transcript >Hirsu2|6689
ATGAAGTTCACGGCCTTGTTGTCCGCGGCGGCCCTCGCCCTCGGCGTCTCCGGCCAGGTCGTCATCCAGCCCAAC
CGGACTGTCATCACCACCGTCATCTCGACAGCCTTCACCACCTTCTGTCCCACTCCGACCACCCTCCGGATCGGC
ACGCGCACCTACACCATCACCAGGCCCACGACCTTGACCATCACCCACTGCCCTTGCACCATCACCAGGGAGCAT
TGGCACCATCATCACCATCATCATCGTCCTGGCCACGGCGGCTTGCCCATCCCCCCGCCCAACACCCGATGGATT
CCGCCCCCGCCTAAGCCGAGTCCCTGGGTGCCCAAGGGCGCGCCTCCTGCCTACCCGCCTCAGCAGCCCGCTCAG
CCGCCTGCCCAGCAGCCTGGCCAGAAGGCACTGCCTGTTCCCGCGAACCCGGCTCCCGCGAACCCGGCTCCCGCT
CCTCAGGCTCCCGCCGTCCCGGCTCCCGCGCCGCAGTCGCCCGCCAGCCCCCCGGCCGCGCCGCAGTCGCCCGCC
GGCGGCAGCCAGAAGCCCGCCCCCGGCACTCCTCAAGTCGTGACCACTTCCGGCGCCGACAAGAAATCCGGAGCC
GGTCTCGGCTCCCTGGCCCTGGCTGGGTTTGCCGCCATGCTGATTTAG
Gene >Hirsu2|6689
ATGAAGTTCACGGCCTTGTTGTCCGCGGCGGCCCTCGCCCTCGGCGTCTCCGGCCAGGTCGTCATCCAGCCCAAC
CGGACTGTCATCACCACCGTCATCTCGACAGCCTTCACCACCTTCTGTCCCGTGAGTCGGCTCTCTCACCCTCCT
CCCTTTCCCTATCCTCCTTCTGCCTCTTCCTCCTGCAGGAAAGGAGGCGACTGGCCTTGCCCATCTAACCACCCA
GGCAGACTCCGACCACCCTCCGGATCGGCACGCGCACCTACACCATCACCAGGCCCACGACCTTGACCATCACCC
ACTGCCCTTGCACCATCACCAGGGAGCATTGGCACCATCATCACCATCATCATCGTCCTGGCCACGGCGGCTTGC
CCATCCCCCCGCCCAACACCCGATGGATTCCGCCCCCGCCTAAGCCGAGTCCCTGGGTGCCCAAGGGCGCGCCTC
CTGCCTACCCGCCTCAGCAGCCCGCTCAGCCGCCTGCCCAGCAGCCTGGCCAGAAGGCACTGCCTGTTCCCGCGA
ACCCGGCTCCCGCGAACCCGGCTCCCGCTCCTCAGGCTCCCGCCGTCCCGGCTCCCGCGCCGCAGTCGCCCGCCA
GCCCCCCGGCCGCGCCGCAGTCGCCCGCCGGCGGCAGCCAGAAGCCCGCCCCCGGCACTCCTCAAGTCGTGACCA
CTTCCGGCGCCGACAAGAAATCCGGAGCCGGTCTCGGCTCCCTGGCCCTGGCTGGGTTTGCCGCCATGCTGATTT
AG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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