Protein ID | Hirsu2|6667 |
Gene name | |
Location | Contig_35:10702..12414 |
Strand | + |
Gene length (bp) | 1712 |
Transcript length (bp) | 1545 |
Coding sequence length (bp) | 1545 |
Protein length (aa) | 515 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01593 | Amino_oxidase | Flavin containing amine oxidoreductase | 4.0E-17 | 21 | 292 |
PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 5.8E-10 | 15 | 85 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016491 | oxidoreductase activity | Yes |
GO:0003674 | molecular_function | No |
GO:0003824 | catalytic activity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 13 | 30 | 17 |
2 | 475 | 497 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6667 MSRPADRFTRKKVAIVGSGCTGIAALWALNRTHHDVYLYEAADRLGGHTNTVFWKAGKYATNVDTGFIVLNTATY PNFINFLKKLNVPTEATEMTFGVSRDQGLFEWAGTSLGAVFCQKKNLVSPRMWRMIFDIIRFNQFALDLLIEDDG GPTAENGTTRSLSSDVETIGQYLDREGYSDAFRDDYLLPMTAAVWSTSPDKCSLQFPVLTLVRFLWNHHLLSTVA ARPQWLTLKNGSKTYIDAVMRGFPPNHLFLNTPVSHVSNDSSGNVLLHLENGKTETYDHVILATHGDQAFSIIEP SATEQERSILSCFETTQNEAVLHSDLTLMPRNRKAWSSWNYLTVSSPSRTNIDQVSLTYNMNILQHIPRDPFGDV LVTLNPLHRPRPATLQGRYFYSHPLYTPAAVRAQKLLRHIQNKRGISYAGAWTKYGFHEDGFSSGLYVAQEHLGA RLPFEFQDSTYSRGKTVKLGLADLILRFFILLIQVFVIQGLARLSAASKRKAGLLSNGIRMKSM* |
Coding | >Hirsu2|6667 ATGAGCCGACCAGCAGACCGCTTCACCAGGAAAAAGGTCGCCATTGTCGGCAGCGGCTGCACCGGCATCGCGGCT CTCTGGGCCCTCAACAGGACTCACCATGACGTCTACCTCTACGAGGCGGCCGACCGGCTCGGCGGCCACACCAAC ACCGTCTTCTGGAAGGCCGGAAAGTACGCCACCAATGTCGACACCGGCTTCATTGTCCTGAATACGGCCACCTAT CCCAACTTCATCAACTTCCTGAAAAAGCTCAACGTCCCCACGGAGGCGACGGAGATGACTTTTGGCGTCTCGCGG GACCAGGGACTATTCGAATGGGCCGGCACCAGCCTGGGCGCCGTCTTCTGCCAGAAGAAGAACCTCGTGTCGCCG CGGATGTGGAGGATGATCTTCGACATCATACGCTTCAACCAGTTTGCCCTGGACCTGCTGATAGAAGACGACGGC GGGCCCACCGCCGAGAACGGCACCACGAGGAGCCTCAGCAGCGATGTTGAGACGATTGGGCAGTATCTGGACCGC GAGGGCTATTCCGACGCCTTCCGAGACGACTATCTGTTGCCCATGACCGCCGCCGTGTGGAGCACCAGCCCCGAC AAGTGCTCGCTGCAGTTCCCCGTCCTGACCTTGGTCCGCTTCCTATGGAATCACCATCTCTTGTCTACAGTGGCT GCCCGCCCGCAGTGGTTGACGCTCAAGAATGGATCGAAAACGTACATTGACGCCGTCATGAGGGGCTTCCCCCCC AATCACCTCTTCCTCAACACCCCCGTGTCCCATGTTTCCAACGACAGCAGCGGCAACGTCTTACTGCACCTCGAG AATGGCAAAACGGAGACGTACGATCACGTCATTCTCGCCACGCATGGCGACCAGGCCTTTTCCATCATCGAACCG TCGGCAACGGAGCAAGAGCGATCGATTCTGTCCTGCTTCGAGACGACGCAAAACGAGGCTGTCTTGCACTCGGAC CTGACCTTGATGCCGCGGAATCGGAAGGCCTGGTCGAGCTGGAACTATCTCACCGTGTCTTCGCCGTCGAGGACG AACATCGACCAGGTCTCGCTGACATACAACATGAACATCCTGCAGCACATCCCCCGGGATCCTTTTGGCGACGTG CTCGTCACCTTGAACCCGCTTCATCGCCCGCGACCCGCCACGTTGCAGGGCCGATACTTTTACTCGCACCCTCTC TACACGCCGGCGGCGGTGCGCGCACAGAAGCTGCTGCGCCATATCCAGAACAAGCGAGGCATCAGCTATGCCGGG GCCTGGACCAAGTACGGCTTCCACGAAGACGGCTTCAGCAGCGGCCTGTACGTCGCCCAGGAGCACCTCGGGGCC AGGCTACCCTTTGAGTTCCAGGACTCGACGTACAGTCGCGGCAAGACGGTCAAGCTGGGACTGGCCGATCTCATC CTGCGCTTCTTCATCCTGCTCATCCAAGTCTTTGTCATTCAGGGTTTGGCGCGATTGTCCGCCGCCAGCAAGCGG AAAGCAGGCCTTTTGTCCAACGGCATCAGGATGAAGAGTATGTGA |
Transcript | >Hirsu2|6667 ATGAGCCGACCAGCAGACCGCTTCACCAGGAAAAAGGTCGCCATTGTCGGCAGCGGCTGCACCGGCATCGCGGCT CTCTGGGCCCTCAACAGGACTCACCATGACGTCTACCTCTACGAGGCGGCCGACCGGCTCGGCGGCCACACCAAC ACCGTCTTCTGGAAGGCCGGAAAGTACGCCACCAATGTCGACACCGGCTTCATTGTCCTGAATACGGCCACCTAT CCCAACTTCATCAACTTCCTGAAAAAGCTCAACGTCCCCACGGAGGCGACGGAGATGACTTTTGGCGTCTCGCGG GACCAGGGACTATTCGAATGGGCCGGCACCAGCCTGGGCGCCGTCTTCTGCCAGAAGAAGAACCTCGTGTCGCCG CGGATGTGGAGGATGATCTTCGACATCATACGCTTCAACCAGTTTGCCCTGGACCTGCTGATAGAAGACGACGGC GGGCCCACCGCCGAGAACGGCACCACGAGGAGCCTCAGCAGCGATGTTGAGACGATTGGGCAGTATCTGGACCGC GAGGGCTATTCCGACGCCTTCCGAGACGACTATCTGTTGCCCATGACCGCCGCCGTGTGGAGCACCAGCCCCGAC AAGTGCTCGCTGCAGTTCCCCGTCCTGACCTTGGTCCGCTTCCTATGGAATCACCATCTCTTGTCTACAGTGGCT GCCCGCCCGCAGTGGTTGACGCTCAAGAATGGATCGAAAACGTACATTGACGCCGTCATGAGGGGCTTCCCCCCC AATCACCTCTTCCTCAACACCCCCGTGTCCCATGTTTCCAACGACAGCAGCGGCAACGTCTTACTGCACCTCGAG AATGGCAAAACGGAGACGTACGATCACGTCATTCTCGCCACGCATGGCGACCAGGCCTTTTCCATCATCGAACCG TCGGCAACGGAGCAAGAGCGATCGATTCTGTCCTGCTTCGAGACGACGCAAAACGAGGCTGTCTTGCACTCGGAC CTGACCTTGATGCCGCGGAATCGGAAGGCCTGGTCGAGCTGGAACTATCTCACCGTGTCTTCGCCGTCGAGGACG AACATCGACCAGGTCTCGCTGACATACAACATGAACATCCTGCAGCACATCCCCCGGGATCCTTTTGGCGACGTG CTCGTCACCTTGAACCCGCTTCATCGCCCGCGACCCGCCACGTTGCAGGGCCGATACTTTTACTCGCACCCTCTC TACACGCCGGCGGCGGTGCGCGCACAGAAGCTGCTGCGCCATATCCAGAACAAGCGAGGCATCAGCTATGCCGGG GCCTGGACCAAGTACGGCTTCCACGAAGACGGCTTCAGCAGCGGCCTGTACGTCGCCCAGGAGCACCTCGGGGCC AGGCTACCCTTTGAGTTCCAGGACTCGACGTACAGTCGCGGCAAGACGGTCAAGCTGGGACTGGCCGATCTCATC CTGCGCTTCTTCATCCTGCTCATCCAAGTCTTTGTCATTCAGGGTTTGGCGCGATTGTCCGCCGCCAGCAAGCGG AAAGCAGGCCTTTTGTCCAACGGCATCAGGATGAAGAGTATGTGA |
Gene | >Hirsu2|6667 ATGAGCCGACCAGCAGACCGCTTCACCAGGAAAAAGGTCGCCATTGTCGGCAGCGGCTGCACCGGCATCGCGGCT CTCTGGGCCCTCAACAGGACTCACCATGACGTCTACCTCTACGAGGCGGCCGACCGGCTCGGCGGCCACACCAAC ACCGTCTTCTGGAAGGCCGGAAAGTACGCCACCAATGTCGACACCGGCTTCATTGTCCTGAATACGGCCACCTAT CGTGAGTCAATTGCCTTGCATCCCTCACCCTTTCCCTTATCCTCTTTCTCTCTGCCTCTTTCTCTCTCGTCGGTT TCGTATCGGCTCACCAATGACTTCGTCACATCGCAGCCAACTTCATCAACTTCCTGAAAAAGCTCAACGTCCCCA CGGAGGCGACGGAGATGACTTTTGGCGTCTCGCGGGACCAGGGACTATTCGAATGGGCCGGCACCAGCCTGGGCG CCGTCTTCTGCCAGAAGAAGAACCTCGTGTCGCCGCGGATGTGGAGGATGATCTTCGACATCATACGCTTCAACC AGTTTGCCCTGGACCTGCTGATAGAAGACGACGGCGGGCCCACCGCCGAGAACGGCACCACGAGGAGCCTCAGCA GCGATGTTGAGACGATTGGGCAGTATCTGGACCGCGAGGGCTATTCCGACGCCTTCCGAGACGACTATCTGTTGC CCATGACCGCCGCCGTGTGGAGCACCAGCCCCGACAAGTGCTCGCTGCAGTTCCCCGTCCTGACCTTGGTCCGCT TCCTGTGAGTCCGCGGCGTCCTTGATGCGACAATTTCCCCGTCACTGACGTGGTTGCGCAGATGGAATCACCATC TCTTGTCTACAGTGGCTGCCCGCCCGCAGTGGTTGACGCTCAAGAATGGATCGAAAACGTACATTGACGCCGTCA TGAGGGGCTTCCCCCCCAATCACCTCTTCCTCAACACCCCCGTGTCCCATGTTTCCAACGACAGCAGCGGCAACG TCTTACTGCACCTCGAGAATGGCAAAACGGAGACGTACGATCACGTCATTCTCGCCACGCATGGCGACCAGGCCT TTTCCATCATCGAACCGTCGGCAACGGAGCAAGAGCGATCGATTCTGTCCTGCTTCGAGACGACGCAAAACGAGG CTGTCTTGCACTCGGACCTGACCTTGATGCCGCGGAATCGGAAGGCCTGGTCGAGCTGGAACTATCTCACCGTGT CTTCGCCGTCGAGGACGAACATCGACCAGGTCTCGCTGACATACAACATGAACATCCTGCAGCACATCCCCCGGG ATCCTTTTGGCGACGTGCTCGTCACCTTGAACCCGCTTCATCGCCCGCGACCCGCCACGTTGCAGGGCCGATACT TTTACTCGCACCCTCTCTACACGCCGGCGGCGGTGCGCGCACAGAAGCTGCTGCGCCATATCCAGAACAAGCGAG GCATCAGCTATGCCGGGGCCTGGACCAAGTACGGCTTCCACGAAGACGGCTTCAGCAGCGGCCTGTACGTCGCCC AGGAGCACCTCGGGGCCAGGCTACCCTTTGAGTTCCAGGACTCGACGTACAGTCGCGGCAAGACGGTCAAGCTGG GACTGGCCGATCTCATCCTGCGCTTCTTCATCCTGCTCATCCAAGTCTTTGTCATTCAGGGTTTGGCGCGATTGT CCGCCGCCAGCAAGCGGAAAGCAGGCCTTTTGTCCAACGGCATCAGGATGAAGAGTATGTGA |