Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|6662
Gene name
Location	Contig_349:18846..19926
Strand	+
Gene length (bp)	1080
Transcript length (bp)	1080
Coding sequence length (bp)	1080
Protein length (aa)	360

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF10330	Stb3	Putative Sin3 binding protein	9.9E-37	98	183

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9P7B0\|STB3_SCHPO	Protein STB3 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=stb3 PE=1 SV=2	103	227	2.0E-12
sp\|Q12427\|STB3_YEAST	Protein STB3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STB3 PE=1 SV=1	108	180	1.0E-11
sp\|Q750U1\|STB3_ASHGO	Protein STB3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=STB3 PE=3 SV=1	88	192	2.0E-11

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 17	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|6662 MASLASAARDIPKAASSNRDNLAVVADRSDSATVARSHTLPTPPNSISPALPAHGLKAQLQKARLEPVESDLDLH DDADADARSRLPSPAAHDASGAITSALLARHHLPEILLNHGPLAIRHIMGYLTTSVPGFSGIPPTKARRLVVGAL EGRGGGDGRGSDGGEVDFEKVGWGRWDARRRGFLNARDRQGTPPTLCGAAIPISRTGTRGQDSRARANPPGSVGD ESLHFSHDDHVMETEADKMSLDDDWASASCSEAPDDDVAMNDDPDDVTDDEDWAAMGAAALRAESYPSMAAAQSG GDLRTPHFAGGGLRPFSSMSSGMARPPPQPANFDLLALAGTSDAQEREAVEALLRLGSV*
Coding	>Hirsu2\|6662 ATGGCTTCCCTGGCATCGGCTGCTCGTGACATCCCCAAGGCCGCCTCCTCGAACCGAGACAACTTAGCTGTTGTA GCGGATCGGAGCGACTCGGCGACTGTGGCACGTTCTCACACCCTCCCGACTCCCCCCAACTCGATATCCCCGGCC CTTCCCGCACACGGCCTCAAGGCTCAGCTCCAAAAGGCCAGGCTCGAGCCCGTCGAGTCCGACCTGGACCTCCAC GACGACGCCGACGCCGACGCCCGCAGCAGGCTACCCTCCCCCGCCGCCCACGATGCGTCAGGCGCCATCACCAGC GCCCTGCTCGCCCGCCACCACCTGCCCGAGATCCTGCTCAACCACGGACCTCTGGCCATCAGGCACATCATGGGC TACCTGACGACGTCGGTCCCGGGCTTCTCCGGCATCCCCCCCACCAAGGCGCGCAGGCTGGTCGTCGGCGCCCTC GAGGGCCGAGGAGGGGGCGACGGACGGGGCTCAGACGGAGGAGAGGTCGACTTTGAGAAGGTCGGATGGGGCCGA TGGGATGCCCGCCGGCGAGGCTTCCTCAACGCCCGCGACCGCCAGGGCACCCCGCCCACACTGTGCGGCGCGGCC ATCCCCATCTCCCGCACGGGCACGCGCGGCCAGGACAGCCGGGCCCGGGCCAACCCCCCCGGATCCGTCGGCGAC GAGTCGCTCCACTTCTCCCACGACGACCACGTCATGGAGACCGAGGCCGACAAGATGTCGCTCGACGACGACTGG GCGTCGGCCTCGTGCTCGGAAGCACCCGACGACGACGTGGCCATGAACGACGACCCCGACGACGTGACCGACGAC GAGGACTGGGCCGCCATGGGCGCCGCCGCCCTGCGGGCCGAGTCGTATCCCAGCATGGCCGCCGCCCAGTCCGGC GGCGACCTCCGGACCCCCCACTTCGCCGGCGGAGGACTGCGACCCTTCTCGTCCATGAGCTCCGGCATGGCGCGT CCACCGCCTCAGCCGGCCAACTTCGACCTGTTGGCGCTGGCCGGCACGTCGGACGCCCAGGAGCGCGAGGCCGTC GAGGCCCTCCTCCGGCTCGGTTCTGTATAA
Transcript	>Hirsu2\|6662 ATGGCTTCCCTGGCATCGGCTGCTCGTGACATCCCCAAGGCCGCCTCCTCGAACCGAGACAACTTAGCTGTTGTA GCGGATCGGAGCGACTCGGCGACTGTGGCACGTTCTCACACCCTCCCGACTCCCCCCAACTCGATATCCCCGGCC CTTCCCGCACACGGCCTCAAGGCTCAGCTCCAAAAGGCCAGGCTCGAGCCCGTCGAGTCCGACCTGGACCTCCAC GACGACGCCGACGCCGACGCCCGCAGCAGGCTACCCTCCCCCGCCGCCCACGATGCGTCAGGCGCCATCACCAGC GCCCTGCTCGCCCGCCACCACCTGCCCGAGATCCTGCTCAACCACGGACCTCTGGCCATCAGGCACATCATGGGC TACCTGACGACGTCGGTCCCGGGCTTCTCCGGCATCCCCCCCACCAAGGCGCGCAGGCTGGTCGTCGGCGCCCTC GAGGGCCGAGGAGGGGGCGACGGACGGGGCTCAGACGGAGGAGAGGTCGACTTTGAGAAGGTCGGATGGGGCCGA TGGGATGCCCGCCGGCGAGGCTTCCTCAACGCCCGCGACCGCCAGGGCACCCCGCCCACACTGTGCGGCGCGGCC ATCCCCATCTCCCGCACGGGCACGCGCGGCCAGGACAGCCGGGCCCGGGCCAACCCCCCCGGATCCGTCGGCGAC GAGTCGCTCCACTTCTCCCACGACGACCACGTCATGGAGACCGAGGCCGACAAGATGTCGCTCGACGACGACTGG GCGTCGGCCTCGTGCTCGGAAGCACCCGACGACGACGTGGCCATGAACGACGACCCCGACGACGTGACCGACGAC GAGGACTGGGCCGCCATGGGCGCCGCCGCCCTGCGGGCCGAGTCGTATCCCAGCATGGCCGCCGCCCAGTCCGGC GGCGACCTCCGGACCCCCCACTTCGCCGGCGGAGGACTGCGACCCTTCTCGTCCATGAGCTCCGGCATGGCGCGT CCACCGCCTCAGCCGGCCAACTTCGACCTGTTGGCGCTGGCCGGCACGTCGGACGCCCAGGAGCGCGAGGCCGTC GAGGCCCTCCTCCGGCTCGGTTCTGTATAA
Gene	>Hirsu2\|6662 ATGGCTTCCCTGGCATCGGCTGCTCGTGACATCCCCAAGGCCGCCTCCTCGAACCGAGACAACTTAGCTGTTGTA GCGGATCGGAGCGACTCGGCGACTGTGGCACGTTCTCACACCCTCCCGACTCCCCCCAACTCGATATCCCCGGCC CTTCCCGCACACGGCCTCAAGGCTCAGCTCCAAAAGGCCAGGCTCGAGCCCGTCGAGTCCGACCTGGACCTCCAC GACGACGCCGACGCCGACGCCCGCAGCAGGCTACCCTCCCCCGCCGCCCACGATGCGTCAGGCGCCATCACCAGC GCCCTGCTCGCCCGCCACCACCTGCCCGAGATCCTGCTCAACCACGGACCTCTGGCCATCAGGCACATCATGGGC TACCTGACGACGTCGGTCCCGGGCTTCTCCGGCATCCCCCCCACCAAGGCGCGCAGGCTGGTCGTCGGCGCCCTC GAGGGCCGAGGAGGGGGCGACGGACGGGGCTCAGACGGAGGAGAGGTCGACTTTGAGAAGGTCGGATGGGGCCGA TGGGATGCCCGCCGGCGAGGCTTCCTCAACGCCCGCGACCGCCAGGGCACCCCGCCCACACTGTGCGGCGCGGCC ATCCCCATCTCCCGCACGGGCACGCGCGGCCAGGACAGCCGGGCCCGGGCCAACCCCCCCGGATCCGTCGGCGAC GAGTCGCTCCACTTCTCCCACGACGACCACGTCATGGAGACCGAGGCCGACAAGATGTCGCTCGACGACGACTGG GCGTCGGCCTCGTGCTCGGAAGCACCCGACGACGACGTGGCCATGAACGACGACCCCGACGACGTGACCGACGAC GAGGACTGGGCCGCCATGGGCGCCGCCGCCCTGCGGGCCGAGTCGTATCCCAGCATGGCCGCCGCCCAGTCCGGC GGCGACCTCCGGACCCCCCACTTCGCCGGCGGAGGACTGCGACCCTTCTCGTCCATGAGCTCCGGCATGGCGCGT CCACCGCCTCAGCCGGCCAACTTCGACCTGTTGGCGCTGGCCGGCACGTCGGACGCCCAGGAGCGCGAGGCCGTC GAGGCCCTCCTCCGGCTCGGTTCTGTATAA

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