© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6656 |
| Gene name | |
| Location | Contig_349:7811..8515 |
| Strand | + |
| Gene length (bp) | 704 |
| Transcript length (bp) | 543 |
| Coding sequence length (bp) | 543 |
| Protein length (aa) | 181 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13664 | DUF4149 | Domain of unknown function (DUF4149) | 2.3E-25 | 15 | 124 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q06089|YP098_YEAST | Uncharacterized mitochondrial outer membrane protein YPR098C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR098C PE=1 SV=2 | 13 | 176 | 1.0E-20 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| 2 | 52 | 74 | 22 |
| 3 | 94 | 116 | 22 |
| 4 | 154 | 176 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6656 MACSAFCSVAPYHIISYGTLLGTSMFHSFINGPVMYKSIEKPAFSAAQKSLFPIYFSIQTAVPAILALTFPGNAL AGVSPGISGLLDASSRWNSLLPITTMFLTGLVNLAVVLPATTKVMKERQGQSKRDGKNWYDQGPHSDEMLALNKK FGMVHGISSLINLTTIISAVAYGFTLGSRM* |
| Coding | >Hirsu2|6656 ATGGCGTGCTCGGCGTTCTGCTCTGTGGCTCCGTACCACATCATCTCCTACGGCACCCTACTAGGCACTTCGATG TTCCACTCCTTCATCAACGGCCCGGTCATGTACAAGTCGATTGAGAAGCCGGCCTTCTCCGCCGCCCAGAAGAGC CTGTTCCCCATCTATTTCAGCATACAAACGGCCGTCCCAGCAATCCTGGCGCTGACCTTTCCGGGAAACGCACTG GCCGGCGTGTCGCCTGGCATTTCTGGGCTTCTGGATGCCTCGAGCCGGTGGAACTCGCTCCTCCCCATAACCACC ATGTTTCTGACAGGCCTTGTCAACCTTGCTGTCGTCCTGCCGGCTACTACCAAGGTCATGAAGGAGCGCCAAGGT CAAAGCAAGCGAGATGGGAAGAATTGGTACGACCAGGGTCCTCACTCCGATGAGATGCTTGCCCTGAATAAGAAG TTCGGGATGGTGCACGGGATCTCCTCCCTCATCAACCTGACCACGATCATCTCAGCCGTTGCTTATGGCTTCACG CTGGGATCCCGCATGTGA |
| Transcript | >Hirsu2|6656 ATGGCGTGCTCGGCGTTCTGCTCTGTGGCTCCGTACCACATCATCTCCTACGGCACCCTACTAGGCACTTCGATG TTCCACTCCTTCATCAACGGCCCGGTCATGTACAAGTCGATTGAGAAGCCGGCCTTCTCCGCCGCCCAGAAGAGC CTGTTCCCCATCTATTTCAGCATACAAACGGCCGTCCCAGCAATCCTGGCGCTGACCTTTCCGGGAAACGCACTG GCCGGCGTGTCGCCTGGCATTTCTGGGCTTCTGGATGCCTCGAGCCGGTGGAACTCGCTCCTCCCCATAACCACC ATGTTTCTGACAGGCCTTGTCAACCTTGCTGTCGTCCTGCCGGCTACTACCAAGGTCATGAAGGAGCGCCAAGGT CAAAGCAAGCGAGATGGGAAGAATTGGTACGACCAGGGTCCTCACTCCGATGAGATGCTTGCCCTGAATAAGAAG TTCGGGATGGTGCACGGGATCTCCTCCCTCATCAACCTGACCACGATCATCTCAGCCGTTGCTTATGGCTTCACG CTGGGATCCCGCATGTGA |
| Gene | >Hirsu2|6656 ATGGCGTGCTCGGCGTTCTGCTCTGTGGCTCCGTACCACATCATCTCGTACGTGCATCAACTGTCAATTGTGGGA GCGAATGGTCTGATGCTGACACTTGCATCAGCTACGGCACCCTACTAGGCACTTCGATGTTCCACGTGAGTGATG TCCGCCCTCTCTTTTCCGTCGATGCTAATTCGACCTTTCCAGTCCTTCATCAACGGCCCGGTCATGTACAAGTCG ATTGAGAAGCCGGCCTTCTCCGCCGCCCAGAAGAGCCTGTTCCCCATCTATTTCAGCATACAAACGGCCGTCCCA GCAATCCTGGCGCTGACCTTTCCGGGAAACGCACTGGCCGGCGTGTCGCCTGGCATTTCTGGGCTTCTGGATGCC TCGAGCCGGTGGAACTCGCTCCTCCCCATAACCACCATGTTTCTGACAGGCCTTGTCAACCTTGCTGTCGTCCTG CCGGCTACTACCAAGGTCATGAAGGAGCGCCAAGGTCAAAGTAAAACAACTCGCTCAGCCGTACGGTTGATCAAA GCTAACTGTAACCAGGCAAGCGAGATGGGAAGAATTGGTACGACCAGGGTCCTCACTCCGATGAGATGCTTGCCC TGAATAAGAAGTTCGGGATGGTGCACGGGATCTCCTCCCTCATCAACCTGACCACGATCATCTCAGCCGTTGCTT ATGGCTTCACGCTGGGATCCCGCATGTGA |