Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|6643
Gene name
Location	Contig_347:10011..12265
Strand	-
Gene length (bp)	2254
Transcript length (bp)	1749
Coding sequence length (bp)	1749
Protein length (aa)	583

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12752	SUZ	SUZ domain	3.7E-15	343	408
PF01424	R3H	R3H domain	4.6E-08	279	323

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q15032\|R3HD1_HUMAN	R3H domain-containing protein 1 OS=Homo sapiens GN=R3HDM1 PE=1 SV=3	265	414	5.0E-14
sp\|Q80TM6\|R3HD2_MOUSE	R3H domain-containing protein 2 OS=Mus musculus GN=R3hdm2 PE=1 SV=2	265	404	8.0E-13
sp\|A0JNC2\|R3HD2_BOVIN	R3H domain-containing protein 2 OS=Bos taurus GN=R3HDM2 PE=2 SV=1	265	405	1.0E-12
sp\|Q9UBL0\|ARP21_HUMAN	cAMP-regulated phosphoprotein 21 OS=Homo sapiens GN=ARPP21 PE=1 SV=2	265	468	2.0E-12
sp\|Q9DCB4\|ARP21_MOUSE	cAMP-regulated phosphoprotein 21 OS=Mus musculus GN=Arpp21 PE=1 SV=2	267	468	1.0E-11

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q15032\|R3HD1_HUMAN	R3H domain-containing protein 1 OS=Homo sapiens GN=R3HDM1 PE=1 SV=3	265	414	5.0E-14
sp\|Q80TM6\|R3HD2_MOUSE	R3H domain-containing protein 2 OS=Mus musculus GN=R3hdm2 PE=1 SV=2	265	404	8.0E-13
sp\|A0JNC2\|R3HD2_BOVIN	R3H domain-containing protein 2 OS=Bos taurus GN=R3HDM2 PE=2 SV=1	265	405	1.0E-12
sp\|Q9UBL0\|ARP21_HUMAN	cAMP-regulated phosphoprotein 21 OS=Homo sapiens GN=ARPP21 PE=1 SV=2	265	468	2.0E-12
sp\|Q9DCB4\|ARP21_MOUSE	cAMP-regulated phosphoprotein 21 OS=Mus musculus GN=Arpp21 PE=1 SV=2	267	468	1.0E-11
sp\|Q8MSX1\|ENC_DROME	Protein encore OS=Drosophila melanogaster GN=enc PE=1 SV=2	250	404	9.0E-10
sp\|Q9Y2K5\|R3HD2_HUMAN	R3H domain-containing protein 2 OS=Homo sapiens GN=R3HDM2 PE=1 SV=3	265	326	6.0E-08

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GO

GO Term	Description	Terminal node
GO:0003676	nucleic acid binding	Yes
GO:0097159	organic cyclic compound binding	No
GO:0005488	binding	No
GO:1901363	heterocyclic compound binding	No
GO:0003674	molecular_function	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 17	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|6643 MATAQVSSDLPRPSFAKVAAAVSKEPSSGPSSASDQAATSKNQHGAAGPIVVSGASANATLPPRNPLPAQSAGQG TVRGNPAVTDKVVASLNDLKLAPKVPHFVVDGSGVALERQRPLVSRESVSDESQKCDSSSELGTKPPSLDGKSIT SGTTFALDEKESLRPDDSASVKAAAEDDDAFSIRGSFIAGSRMGSEVAAKARGIQLGDIPERRLVQQPLGTPGHG VLTPQSSTSERPPPANPTMPLSAEGSSDALNVIYRQAPDEKLLDALASPRDRYFLLRLEKDVIDFVQDSKEPYMD LPPSNSFCRMLTHKLADYYHMTHSYEPHIGASTASTPPPAVLPKKIMRRGQDGEGGPVSAGASKPTSESGSDNKD GKEKQPMAKEKLSREEREEIYKLARERIFGSAEEVVQENDGENGMSRTSSVSATNKVATNKRGKTGKQRRDDSDS FDSRYQYTPYWGPQQQTWVPQPQGQFLPPAHGQFNSQPLHAYPGQTTAAYGQQPAAYPGVSCMPPPPPPPPPPPP NPNYQAYGMPQGPPQHPQQRYQPGMAAGLQCAGLPTESTGTPSIAGSKPASHPRKLQ*
Coding	>Hirsu2\|6643 ATGGCGACCGCACAGGTATCTTCGGATCTCCCACGGCCTTCCTTTGCCAAGGTGGCCGCCGCTGTTTCAAAAGAG CCTTCATCGGGTCCATCTTCCGCCAGCGACCAGGCTGCAACTTCCAAAAACCAGCATGGAGCCGCCGGCCCCATT GTCGTCAGCGGTGCCTCAGCAAATGCCACTCTCCCGCCGCGAAACCCCTTGCCTGCCCAATCCGCGGGCCAAGGT ACAGTCAGGGGCAATCCTGCCGTCACGGACAAAGTGGTAGCGTCGCTGAATGACCTGAAGCTCGCACCCAAGGTT CCTCACTTTGTCGTCGACGGGTCTGGCGTCGCGCTGGAACGCCAACGCCCACTGGTCAGCAGGGAGAGCGTATCG GACGAATCGCAGAAATGTGACTCGAGCTCCGAGCTGGGGACCAAGCCCCCCAGCTTGGACGGCAAGAGCATCACC TCCGGGACCACCTTTGCCCTGGACGAAAAGGAATCGCTTCGTCCCGACGATAGTGCAAGCGTTAAGGCCGCTGCC GAGGACGACGACGCCTTCTCTATCCGAGGCTCCTTCATTGCCGGCTCTCGCATGGGCTCCGAGGTCGCCGCCAAA GCCCGCGGCATTCAGCTGGGAGACATACCCGAGCGCAGGCTGGTGCAGCAACCCCTCGGGACCCCTGGACACGGC GTGTTGACGCCCCAGAGTTCGACTTCTGAGCGACCGCCGCCCGCCAATCCCACGATGCCACTGAGCGCCGAGGGC TCGTCGGATGCTCTCAATGTCATCTATCGGCAGGCCCCGGACGAGAAGCTTCTCGATGCCCTTGCCAGCCCCAGA GATCGATATTTTCTGCTAAGATTGGAGAAGGATGTTATCGATTTTGTACAGGATTCCAAGGAACCGTACATGGAC TTGCCACCGTCGAATTCGTTCTGTCGCATGTTAACGCATAAGCTGGCCGACTACTACCACATGACACACTCTTAC GAGCCACATATCGGCGCTTCCACCGCCAGCACTCCGCCGCCCGCCGTTCTTCCCAAAAAGATCATGCGCCGTGGG CAAGACGGGGAGGGTGGACCGGTGAGCGCCGGCGCCTCGAAGCCTACGTCCGAGTCTGGAAGCGACAACAAGGAC GGCAAAGAGAAACAGCCAATGGCGAAAGAGAAACTATCGAGAGAAGAGAGAGAGGAGATATACAAGTTGGCTCGG GAGCGCATATTCGGCAGCGCGGAAGAAGTCGTTCAAGAAAACGACGGCGAGAATGGAATGTCTCGCACGAGCTCT GTCTCTGCCACTAACAAAGTTGCCACCAATAAACGTGGCAAGACTGGTAAACAGCGACGCGATGACTCGGACAGC TTTGACTCCAGGTACCAGTATACTCCTTACTGGGGCCCGCAGCAGCAGACCTGGGTGCCTCAACCTCAAGGGCAG TTCCTGCCTCCAGCTCACGGCCAATTCAACAGCCAGCCACTGCATGCGTATCCTGGACAGACCACGGCCGCGTAC GGCCAGCAGCCAGCCGCCTACCCCGGCGTGTCCTGCATGCCGCCGCCGCCGCCGCCGCCTCCTCCTCCTCCTCCC AACCCGAACTACCAAGCCTACGGCATGCCCCAGGGTCCGCCGCAACACCCTCAACAGCGCTATCAACCCGGGATG GCAGCCGGGCTTCAATGCGCCGGCCTACCCACCGAGAGCACCGGCACCCCCAGCATCGCAGGGTCAAAGCCAGCA TCCCATCCCCGGAAGCTACAGTAG
Transcript	>Hirsu2\|6643 ATGGCGACCGCACAGGTATCTTCGGATCTCCCACGGCCTTCCTTTGCCAAGGTGGCCGCCGCTGTTTCAAAAGAG CCTTCATCGGGTCCATCTTCCGCCAGCGACCAGGCTGCAACTTCCAAAAACCAGCATGGAGCCGCCGGCCCCATT GTCGTCAGCGGTGCCTCAGCAAATGCCACTCTCCCGCCGCGAAACCCCTTGCCTGCCCAATCCGCGGGCCAAGGT ACAGTCAGGGGCAATCCTGCCGTCACGGACAAAGTGGTAGCGTCGCTGAATGACCTGAAGCTCGCACCCAAGGTT CCTCACTTTGTCGTCGACGGGTCTGGCGTCGCGCTGGAACGCCAACGCCCACTGGTCAGCAGGGAGAGCGTATCG GACGAATCGCAGAAATGTGACTCGAGCTCCGAGCTGGGGACCAAGCCCCCCAGCTTGGACGGCAAGAGCATCACC TCCGGGACCACCTTTGCCCTGGACGAAAAGGAATCGCTTCGTCCCGACGATAGTGCAAGCGTTAAGGCCGCTGCC GAGGACGACGACGCCTTCTCTATCCGAGGCTCCTTCATTGCCGGCTCTCGCATGGGCTCCGAGGTCGCCGCCAAA GCCCGCGGCATTCAGCTGGGAGACATACCCGAGCGCAGGCTGGTGCAGCAACCCCTCGGGACCCCTGGACACGGC GTGTTGACGCCCCAGAGTTCGACTTCTGAGCGACCGCCGCCCGCCAATCCCACGATGCCACTGAGCGCCGAGGGC TCGTCGGATGCTCTCAATGTCATCTATCGGCAGGCCCCGGACGAGAAGCTTCTCGATGCCCTTGCCAGCCCCAGA GATCGATATTTTCTGCTAAGATTGGAGAAGGATGTTATCGATTTTGTACAGGATTCCAAGGAACCGTACATGGAC TTGCCACCGTCGAATTCGTTCTGTCGCATGTTAACGCATAAGCTGGCCGACTACTACCACATGACACACTCTTAC GAGCCACATATCGGCGCTTCCACCGCCAGCACTCCGCCGCCCGCCGTTCTTCCCAAAAAGATCATGCGCCGTGGG CAAGACGGGGAGGGTGGACCGGTGAGCGCCGGCGCCTCGAAGCCTACGTCCGAGTCTGGAAGCGACAACAAGGAC GGCAAAGAGAAACAGCCAATGGCGAAAGAGAAACTATCGAGAGAAGAGAGAGAGGAGATATACAAGTTGGCTCGG GAGCGCATATTCGGCAGCGCGGAAGAAGTCGTTCAAGAAAACGACGGCGAGAATGGAATGTCTCGCACGAGCTCT GTCTCTGCCACTAACAAAGTTGCCACCAATAAACGTGGCAAGACTGGTAAACAGCGACGCGATGACTCGGACAGC TTTGACTCCAGGTACCAGTATACTCCTTACTGGGGCCCGCAGCAGCAGACCTGGGTGCCTCAACCTCAAGGGCAG TTCCTGCCTCCAGCTCACGGCCAATTCAACAGCCAGCCACTGCATGCGTATCCTGGACAGACCACGGCCGCGTAC GGCCAGCAGCCAGCCGCCTACCCCGGCGTGTCCTGCATGCCGCCGCCGCCGCCGCCGCCTCCTCCTCCTCCTCCC AACCCGAACTACCAAGCCTACGGCATGCCCCAGGGTCCGCCGCAACACCCTCAACAGCGCTATCAACCCGGGATG GCAGCCGGGCTTCAATGCGCCGGCCTACCCACCGAGAGCACCGGCACCCCCAGCATCGCAGGGTCAAAGCCAGCA TCCCATCCCCGGAAGCTACAGTAG
Gene	>Hirsu2\|6643 ATGGCGACCGCACAGGTATCTTCGGATCTCCCACGGCCTTCCTTTGCCAAGGTACGCGCTCTCGCCCGACGCGCC ACCTGTTTTGCGCACTTGCTGACACTTAGTGAACCCTCCTGTACAGGTGGCCGCCGCTGTTTCAAAAGAGCCTTC ATCGGGTCCATCTTCCGCCAGCGACCAGGCTGCAACTTCCAAAAACCAGCATGGAGCCGCCGGCCCCATTGTCGT CAGCGGTGCCTCAGCAAATGCCACTCTCCCGCCGCGAAACCCCTTGCCTGCCCAATCCGCGGGCCAAGGTACAGT CAGGGGCAATCCTGCCGTCACGGACAAAGTGGTAGCGTCGCTGAATGACCTGAAGCTCGCACCCAAGGTTCCTCA CTTTGTCGTCGACGGGTCTGGCGTCGCGCTGGAACGCCAACGCCCACTGGTCAGCAGGGAGAGCGTATCGGACGA ATCGCAGAAATGTGACTCGAGCTCCGAGCTGGGGACCAAGCCCCCCAGCTTGGACGGCAAGAGCATCACCTCCGG GACCACCTTTGCCCTGGACGAAAAGGAATCGCTTCGTCCCGACGATAGTGCAAGCGTTAAGGCCGCTGCCGAGGA CGACGACGCCTTCTCTATCCGAGGCTCCTTCATTGCCGGCTCTCGCATGGGCTCCGAGGTCGCCGCCAAAGCCCG CGGCATTCAGCTGGGAGACATACCCGAGCGCAGGCTGGTGCAGCAACCCCTCGGGACCCCTGGACACGGCGTGTT GACGCCCCAGAGTTCGACTTCTGAGCGACCGCCGCCCGCCAATCCCACGATGCCACTGAGCGCCGAGGGCTCGTC GGATGCTCTCAATGTCATCTATCGGCAGGCCCCGGACGAGAAGCTTCTCGATGCCCTTGCCAGCCCCAGAGATCG ATATTTTCTGCTAAGATTGGAGAAGGATGTTATCGATTTTGTACAGGATTCCAAGTATGTTGAGCTTCGGCCTCT GTTTCGGCCTCTCTCCACCTCGTCCTCGGCCCCGAGCCCCTGTTCTAACACTCCCAGGGAACCGTACATGGACTT GCCACCGTCGAATTCGTTCTGTCGCATGTTAACGCATAAGCTGGCCGACTACTACCACATGACACACTCTTACGA GCCACATATCGGGTCCGTCCGCATATTCCGAACGCCATTCTGTCGGGTCCCTCCGTCTCTGGCAACCATGGCGCC GCAACCCAGCGCTTCCACCGCCAGCACTCCGCCGCCCGCCGTTCTTCCCAAAAAGATCATGCGCCGTGGGCAAGA CGGGGAGGGTGGACCGGTGAGCGCCGGCGCCTCGAAGCCTACGTCCGAGTCTGGAAGCGACAACAAGGACGGCAA AGAGAAACAGCCAATGGCGAAAGAGAAGTCAGCGCACTTTGCGCACTGTTGAGAAGTCTCGGCCTGCTGACATAT CGCATCAGACTATCGAGAGAAGAGAGAGAGGAGATATACAAGTTGGCTCGGGAGCGCATATTCGGCAGCGCGGAA GAAGTCGTTCAAGGTATGTCGCCGCGCGCAAAAAGGTCAGACGTCTGCCCACCGCGACTGACACACGTGTAGAAA ACGACGGCGAGAATGGAATGTCTCGCACGAGCTCTGTCTCTGCCACTAACAAAGTTGCCACCAATAAACGTGGCA AGACTGGTAAACAGCGACGCGATGACTCGGACAGCTTTGACTCCAGGTACCAGTATACTCCTTACTGGGGCCCGC AGCAGCAGACCTGGGTGCCTCAACCTCAAGGGCAGTTCCTGCCTCCAGCTCACGGCCAATTCAACAGCCAGCCAC TGCATGCGTATCCTGGACAGACCACGGCCGCGTACGGCCAGCAGCCAGCCGCCTACCCCGGCGTGTCCTGCATGC CGCCGCCGCCGCCGCCGCCTCCTCCTCCTCCTCCCAACCCGAACTACCAAGCCTACGGCATGCCCCAGGTGAGCG GTGTTCACGGTGCTTCCCCGTGCTCGCGACTGACGACTGGCGCGCAGGGTCCGCCGCAACACCCTCAACAGCGCT ATCAACCCGGTGGCAGCCCGATGACGGCCTACGGCTCCCCGGTGCCTCCGCCCGCTGTGCCGCAGGGATGGCAGC CGGGCTTCAATGCGCCGGCCTACCCACCGAGAGCACCGGCACCCCCAGCATCGCAGGGTCAAGTAGGCATTCCGT ATGCCTACGGGCAGCTCCCTGCGAATGCTAACCCGAACGATCCAAAGAGCCAGCATCCCATCCCCGGAAGCTACA GTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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