Protein ID | Hirsu2|6613 |
Gene name | |
Location | Contig_344:13789..14905 |
Strand | - |
Gene length (bp) | 1116 |
Transcript length (bp) | 1116 |
Coding sequence length (bp) | 1116 |
Protein length (aa) | 372 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 1.2E-22 | 51 | 179 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P43528|E2BA_ECOLX | Heat-labile enterotoxin IIB, A chain OS=Escherichia coli PE=1 SV=2 | 52 | 177 | 3.0E-14 |
sp|P13810|E2AA_ECOLX | Heat-labile enterotoxin IIA, A chain OS=Escherichia coli PE=3 SV=1 | 52 | 177 | 6.0E-14 |
sp|P01555|CHTA_VIBCH | Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1 | 51 | 188 | 2.0E-12 |
sp|P43530|ELAH_ECOH1 | Heat-labile enterotoxin A chain OS=Escherichia coli O78:H11 (strain H10407 / ETEC) GN=eltA PE=3 SV=1 | 51 | 179 | 6.0E-12 |
sp|P06717|ELAP_ECOLX | Heat-labile enterotoxin A chain OS=Escherichia coli GN=eltA PE=1 SV=1 | 51 | 179 | 6.0E-12 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P43528|E2BA_ECOLX | Heat-labile enterotoxin IIB, A chain OS=Escherichia coli PE=1 SV=2 | 52 | 177 | 3.0E-14 |
sp|P13810|E2AA_ECOLX | Heat-labile enterotoxin IIA, A chain OS=Escherichia coli PE=3 SV=1 | 52 | 177 | 6.0E-14 |
sp|P01555|CHTA_VIBCH | Cholera enterotoxin subunit A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=ctxA PE=1 SV=1 | 51 | 188 | 2.0E-12 |
sp|P43530|ELAH_ECOH1 | Heat-labile enterotoxin A chain OS=Escherichia coli O78:H11 (strain H10407 / ETEC) GN=eltA PE=3 SV=1 | 51 | 179 | 6.0E-12 |
sp|P06717|ELAP_ECOLX | Heat-labile enterotoxin A chain OS=Escherichia coli GN=eltA PE=1 SV=1 | 51 | 179 | 6.0E-12 |
sp|A2PU44|CHELT_VIBCL | NAD(+)--arginine ADP-ribosyltransferase Chelt OS=Vibrio cholerae GN=A51_B1772 PE=1 SV=1 | 35 | 179 | 2.0E-11 |
GO Term | Description | Terminal node |
---|---|---|
GO:0090729 | toxin activity | Yes |
GO:0005615 | extracellular space | Yes |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
GO:0110165 | cellular anatomical entity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1692 | 0.0981 | 0.8625 | 0.1391 | 0.1288 | 0.0317 | 0.3151 | 0.305 | 0.2461 | 0.0055 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 20 | 0.999722 |
Orthofinder run ID | 4 |
Orthogroup | 18 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6613 MHLSASLCLLFSLGAGLGGADPAPDNGCDWTPKETWPLRTGAGAGPGPEFVFRGDSREPETIKAEGGWLPWARPE LSGRAYGLLNHERDERDALGRRDSVYVSTTTSFDVAARYAALNVRRNAAGRTYIYYLHASPNLVDVNGALANETR FWWQREFAAMGGLRWSQVVGWVRVDAGFFAALGYRLPGCGAEDGANGLFHDRLERPCAAAGGDIASPDYYTGSPD PSTPSPGSYTASPDYSTASPDYSTASPDYYTASPDYCPVRWRSFRAAAWEPQLAGFADFEHEFAARGRPLWWRAV EPWRTALAKTTEQHALDFMDRTRNATGWRGRFPLFDRGDREPPCPEPVSCPVRSGPVESVPSSGAVRRSLL* |
Coding | >Hirsu2|6613 ATGCACCTATCCGCCTCCCTCTGCCTGCTCTTCAGCCTGGGCGCGGGCCTGGGCGGCGCGGACCCGGCCCCGGAC AACGGCTGCGACTGGACGCCCAAGGAGACGTGGCCGCTGCGGACGGGCGCCGGCGCCGGGCCGGGCCCCGAGTTC GTCTTCCGCGGCGACAGCCGCGAGCCGGAGACGATCAAGGCCGAGGGCGGGTGGCTGCCGTGGGCGCGGCCGGAG CTGAGCGGGCGGGCGTACGGGCTGCTGAACCACGAGCGCGACGAGCGCGACGCGCTGGGCCGACGCGACAGCGTC TACGTGTCGACGACGACGTCGTTCGACGTGGCCGCGCGCTACGCCGCCCTCAACGTGCGCCGCAACGCCGCCGGC CGCACCTACATCTACTACCTACACGCGTCGCCCAACCTGGTCGACGTCAACGGCGCGCTCGCCAACGAGACGCGC TTCTGGTGGCAGCGCGAGTTCGCCGCCATGGGCGGCCTGCGCTGGTCCCAGGTCGTCGGCTGGGTCCGCGTCGAT GCCGGCTTCTTCGCCGCCCTCGGCTACCGCCTGCCCGGCTGCGGCGCCGAGGACGGCGCCAACGGCCTCTTCCAC GACCGCCTCGAGCGCCCCTGTGCCGCCGCCGGTGGCGACATCGCCAGTCCGGACTACTACACCGGAAGCCCGGAC CCCTCCACCCCCAGCCCGGGCTCCTACACCGCCAGTCCGGACTACTCCACCGCCAGTCCGGACTACTCCACCGCC AGCCCGGACTACTACACCGCCAGCCCGGACTACTGTCCCGTCCGCTGGCGCAGCTTCCGCGCCGCCGCCTGGGAG CCCCAGCTGGCCGGCTTCGCCGACTTCGAGCACGAGTTCGCCGCCCGGGGGAGGCCGCTGTGGTGGAGGGCCGTC GAGCCGTGGCGCACCGCCCTGGCCAAGACGACCGAGCAGCACGCCCTCGACTTCATGGACCGCACCCGCAACGCC ACCGGCTGGCGCGGCCGCTTCCCGCTCTTCGACCGGGGGGATCGCGAGCCGCCCTGCCCCGAGCCCGTCTCCTGC CCCGTCCGGAGCGGGCCCGTCGAGTCCGTCCCCAGCAGCGGCGCCGTGCGCAGGTCTCTGCTCTGA |
Transcript | >Hirsu2|6613 ATGCACCTATCCGCCTCCCTCTGCCTGCTCTTCAGCCTGGGCGCGGGCCTGGGCGGCGCGGACCCGGCCCCGGAC AACGGCTGCGACTGGACGCCCAAGGAGACGTGGCCGCTGCGGACGGGCGCCGGCGCCGGGCCGGGCCCCGAGTTC GTCTTCCGCGGCGACAGCCGCGAGCCGGAGACGATCAAGGCCGAGGGCGGGTGGCTGCCGTGGGCGCGGCCGGAG CTGAGCGGGCGGGCGTACGGGCTGCTGAACCACGAGCGCGACGAGCGCGACGCGCTGGGCCGACGCGACAGCGTC TACGTGTCGACGACGACGTCGTTCGACGTGGCCGCGCGCTACGCCGCCCTCAACGTGCGCCGCAACGCCGCCGGC CGCACCTACATCTACTACCTACACGCGTCGCCCAACCTGGTCGACGTCAACGGCGCGCTCGCCAACGAGACGCGC TTCTGGTGGCAGCGCGAGTTCGCCGCCATGGGCGGCCTGCGCTGGTCCCAGGTCGTCGGCTGGGTCCGCGTCGAT GCCGGCTTCTTCGCCGCCCTCGGCTACCGCCTGCCCGGCTGCGGCGCCGAGGACGGCGCCAACGGCCTCTTCCAC GACCGCCTCGAGCGCCCCTGTGCCGCCGCCGGTGGCGACATCGCCAGTCCGGACTACTACACCGGAAGCCCGGAC CCCTCCACCCCCAGCCCGGGCTCCTACACCGCCAGTCCGGACTACTCCACCGCCAGTCCGGACTACTCCACCGCC AGCCCGGACTACTACACCGCCAGCCCGGACTACTGTCCCGTCCGCTGGCGCAGCTTCCGCGCCGCCGCCTGGGAG CCCCAGCTGGCCGGCTTCGCCGACTTCGAGCACGAGTTCGCCGCCCGGGGGAGGCCGCTGTGGTGGAGGGCCGTC GAGCCGTGGCGCACCGCCCTGGCCAAGACGACCGAGCAGCACGCCCTCGACTTCATGGACCGCACCCGCAACGCC ACCGGCTGGCGCGGCCGCTTCCCGCTCTTCGACCGGGGGGATCGCGAGCCGCCCTGCCCCGAGCCCGTCTCCTGC CCCGTCCGGAGCGGGCCCGTCGAGTCCGTCCCCAGCAGCGGCGCCGTGCGCAGGTCTCTGCTCTGA |
Gene | >Hirsu2|6613 ATGCACCTATCCGCCTCCCTCTGCCTGCTCTTCAGCCTGGGCGCGGGCCTGGGCGGCGCGGACCCGGCCCCGGAC AACGGCTGCGACTGGACGCCCAAGGAGACGTGGCCGCTGCGGACGGGCGCCGGCGCCGGGCCGGGCCCCGAGTTC GTCTTCCGCGGCGACAGCCGCGAGCCGGAGACGATCAAGGCCGAGGGCGGGTGGCTGCCGTGGGCGCGGCCGGAG CTGAGCGGGCGGGCGTACGGGCTGCTGAACCACGAGCGCGACGAGCGCGACGCGCTGGGCCGACGCGACAGCGTC TACGTGTCGACGACGACGTCGTTCGACGTGGCCGCGCGCTACGCCGCCCTCAACGTGCGCCGCAACGCCGCCGGC CGCACCTACATCTACTACCTACACGCGTCGCCCAACCTGGTCGACGTCAACGGCGCGCTCGCCAACGAGACGCGC TTCTGGTGGCAGCGCGAGTTCGCCGCCATGGGCGGCCTGCGCTGGTCCCAGGTCGTCGGCTGGGTCCGCGTCGAT GCCGGCTTCTTCGCCGCCCTCGGCTACCGCCTGCCCGGCTGCGGCGCCGAGGACGGCGCCAACGGCCTCTTCCAC GACCGCCTCGAGCGCCCCTGTGCCGCCGCCGGTGGCGACATCGCCAGTCCGGACTACTACACCGGAAGCCCGGAC CCCTCCACCCCCAGCCCGGGCTCCTACACCGCCAGTCCGGACTACTCCACCGCCAGTCCGGACTACTCCACCGCC AGCCCGGACTACTACACCGCCAGCCCGGACTACTGTCCCGTCCGCTGGCGCAGCTTCCGCGCCGCCGCCTGGGAG CCCCAGCTGGCCGGCTTCGCCGACTTCGAGCACGAGTTCGCCGCCCGGGGGAGGCCGCTGTGGTGGAGGGCCGTC GAGCCGTGGCGCACCGCCCTGGCCAAGACGACCGAGCAGCACGCCCTCGACTTCATGGACCGCACCCGCAACGCC ACCGGCTGGCGCGGCCGCTTCCCGCTCTTCGACCGGGGGGATCGCGAGCCGCCCTGCCCCGAGCCCGTCTCCTGC CCCGTCCGGAGCGGGCCCGTCGAGTCCGTCCCCAGCAGCGGCGCCGTGCGCAGGTCTCTGCTCTGA |