Protein ID | Hirsu2|6611 |
Gene name | |
Location | Contig_344:6669..9227 |
Strand | + |
Gene length (bp) | 2558 |
Transcript length (bp) | 2022 |
Coding sequence length (bp) | 2022 |
Protein length (aa) | 674 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01476 | LysM | LysM domain | 6.4E-05 | 619 | 663 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|D4AVW3|LYSM5_ARTBC | LysM domain-containing protein ARB_00327 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_00327 PE=3 SV=2 | 309 | 665 | 2.0E-20 |
sp|D4ALG0|LYSM1_ARTBC | LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 | 271 | 666 | 7.0E-19 |
sp|D4ALG0|LYSM1_ARTBC | LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 | 306 | 666 | 3.0E-11 |
sp|D4ALG0|LYSM1_ARTBC | LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 | 552 | 668 | 3.0E-09 |
sp|D4B5F9|PGDA_ARTBC | Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03699 PE=1 SV=2 | 611 | 665 | 9.0E-09 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|D4AVW3|LYSM5_ARTBC | LysM domain-containing protein ARB_00327 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_00327 PE=3 SV=2 | 309 | 665 | 2.0E-20 |
sp|D4ALG0|LYSM1_ARTBC | LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 | 271 | 666 | 7.0E-19 |
sp|D4ALG0|LYSM1_ARTBC | LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 | 306 | 666 | 3.0E-11 |
sp|D4ALG0|LYSM1_ARTBC | LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 | 552 | 668 | 3.0E-09 |
sp|D4B5F9|PGDA_ARTBC | Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03699 PE=1 SV=2 | 611 | 665 | 9.0E-09 |
sp|D4AZ68|LYSM3_ARTBC | LysM domain-containing protein ARB_01488 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01488 PE=3 SV=1 | 604 | 663 | 1.0E-07 |
sp|D4B4P8|LYSM2_ARTBC | LysM domain-containing protein ARB_03438 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03438 PE=3 SV=1 | 523 | 665 | 3.0E-07 |
sp|D4ALG0|LYSM1_ARTBC | LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 | 222 | 388 | 1.0E-06 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1527 | 0.1268 | 0.9277 | 0.2369 | 0.0595 | 0.0232 | 0.2025 | 0.1771 | 0.1668 | 0.0043 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 26 | 0.994179 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 721 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6611 MAVHRGGSWLSLGLLLVFGIWVEALAFLPTLDGSAFHLGIPDQLSTPCQTAFNQTTQCNATLGAVAFNGFFPSSD QLTLICTKDCLESLENVRSKQVESCSTESYTVDGKAVPATYDVDRLLFTYNYTCLRDGITKDFCAPLVDEWSQNE EPTSNQSCSDCMLHTFQVELNSPFGYDSEFASYYTSLTSSCGVTDYPIISPTPYTVSRTATTTSPSASASESCAS RYNAKEGDDCLSVSKSQRVSTAMLRFQNGIAADCSNFPEAGTSLCIPESCEPYTLLANETCRGISEAHNASFTMT QLISWNPDINRDCSNLEALTGTQLCISAPGDSTEPDVASATSTTVGPVPAPTNVVDGTNLRCGKYYQVALGDTCA SISVTMGISLRDFYFLVSTTRDCFSPVANSADAGARIPRSIATVPIYWPDTPTASRRLAISQPIPDTVPPSCLAT SVSTASDWTFPSFTTTKATKPTPLPLAPGTLSNCSEYAEYITARQKSSAINACNVVASFYDVADTKRTADVDDFV SWNPSLSYDAKHWLDCQLKPGYLYCAHPALPKAATTSMSTSSASMTATMSSFSKGAASSASTTSATPPSRTGSNG EPTPLPIQAGMTSACGGFYLVKPGDGCYDIASANEIALADLYSWNPALKGDCSGLYYGYYICIGLLSRTATSS* |
Coding | >Hirsu2|6611 ATGGCTGTCCACCGCGGGGGCTCATGGTTGTCACTTGGGCTTCTGCTTGTGTTTGGCATATGGGTAGAAGCGCTG GCCTTTCTGCCAACCCTGGATGGCAGTGCATTTCATTTAGGAATCCCGGACCAGCTCTCCACACCCTGCCAGACG GCATTCAACCAGACTACTCAGTGCAATGCCACGCTGGGAGCTGTCGCGTTCAATGGCTTCTTCCCCTCAAGCGAC CAGTTGACTCTCATCTGTACGAAAGACTGCCTCGAATCTCTGGAGAATGTTCGCTCCAAGCAGGTCGAGTCCTGT TCGACGGAGTCTTATACCGTCGACGGGAAAGCCGTTCCGGCCACCTACGACGTGGACCGATTGCTTTTCACCTAC AATTACACCTGTTTGCGAGATGGAATCACCAAGGACTTCTGCGCTCCTCTTGTCGATGAATGGTCACAAAATGAG GAGCCAACGTCCAACCAGTCCTGCTCCGATTGCATGTTGCACACTTTCCAGGTAGAACTTAACTCGCCATTCGGT TACGATAGCGAGTTTGCTAGCTACTACACCTCCCTTACCTCTTCCTGTGGAGTCACAGACTACCCGATCATCTCG CCGACTCCCTACACCGTATCGAGGACGGCGACAACGACGTCTCCATCTGCCAGCGCCTCAGAAAGTTGTGCATCC AGATACAATGCCAAGGAGGGAGATGACTGCCTCAGCGTCAGTAAGTCGCAGCGTGTGTCGACGGCGATGTTGCGA TTCCAGAACGGCATCGCCGCCGACTGTTCTAATTTTCCAGAGGCCGGAACGTCCCTCTGCATACCCGAGAGCTGT GAGCCTTATACGCTTCTGGCGAATGAGACCTGTCGTGGCATCAGTGAGGCACATAACGCTAGTTTCACAATGACC CAGCTCATCTCATGGAACCCCGACATCAACCGCGATTGCAGCAATTTGGAAGCGTTGACAGGGACTCAACTCTGC ATCAGTGCACCTGGAGACTCGACAGAGCCAGACGTCGCCTCAGCTACTTCGACGACTGTGGGACCAGTCCCCGCG CCGACAAATGTGGTAGACGGGACCAATCTTCGGTGCGGTAAGTACTACCAAGTAGCTCTGGGCGATACTTGCGCT TCCATCAGCGTGACGATGGGCATCAGCCTCCGTGACTTTTACTTCTTGGTAAGTACAACCCGGGACTGTTTTTCT CCGGTTGCCAACTCGGCTGATGCTGGCGCCAGAATCCCGAGGTCAATAGCGACTGTACCAATCTACTGGCCGGAT ACTCCTACTGCGTCCAGGCGGTTGGCAATATCGCAACCTATTCCGGACACAGTCCCCCCTAGCTGCTTGGCCACA AGCGTATCCACCGCCTCTGACTGGACGTTCCCGTCATTCACCACCACCAAGGCCACCAAGCCGACGCCGCTGCCC CTGGCTCCAGGAACGCTCTCCAATTGCTCAGAATACGCGGAGTACATCACAGCAAGGCAAAAGTCGTCGGCCATT AATGCATGCAATGTTGTGGCGAGCTTCTATGATGTGGCTGACACAAAAAGGACAGCGGACGTTGACGACTTTGTG TCGTGGAATCCATCACTATCGTACGATGCCAAACACTGGCTCGACTGCCAGCTCAAGCCAGGCTATCTGTACTGT GCCCATCCGGCTCTGCCAAAGGCAGCTACTACGTCCATGTCCACGTCGTCGGCATCGATGACAGCCACGATGTCT TCTTTCAGCAAGGGGGCTGCCTCATCGGCATCGACGACATCCGCGACGCCTCCTTCGAGGACGGGGTCCAACGGT GAACCAACGCCACTACCCATCCAGGCGGGCATGACGTCAGCATGCGGTGGGTTCTATCTTGTCAAGCCCGGCGAC GGCTGCTACGACATCGCTTCGGCAAACGAGATAGCTCTCGCAGACCTTTACTCGTGGAACCCAGCCCTGAAGGGT GACTGCTCTGGCTTGTACTACGGCTATTACATCTGTATCGGCTTGCTCTCCCGCACCGCCACTTCTTCCTGA |
Transcript | >Hirsu2|6611 ATGGCTGTCCACCGCGGGGGCTCATGGTTGTCACTTGGGCTTCTGCTTGTGTTTGGCATATGGGTAGAAGCGCTG GCCTTTCTGCCAACCCTGGATGGCAGTGCATTTCATTTAGGAATCCCGGACCAGCTCTCCACACCCTGCCAGACG GCATTCAACCAGACTACTCAGTGCAATGCCACGCTGGGAGCTGTCGCGTTCAATGGCTTCTTCCCCTCAAGCGAC CAGTTGACTCTCATCTGTACGAAAGACTGCCTCGAATCTCTGGAGAATGTTCGCTCCAAGCAGGTCGAGTCCTGT TCGACGGAGTCTTATACCGTCGACGGGAAAGCCGTTCCGGCCACCTACGACGTGGACCGATTGCTTTTCACCTAC AATTACACCTGTTTGCGAGATGGAATCACCAAGGACTTCTGCGCTCCTCTTGTCGATGAATGGTCACAAAATGAG GAGCCAACGTCCAACCAGTCCTGCTCCGATTGCATGTTGCACACTTTCCAGGTAGAACTTAACTCGCCATTCGGT TACGATAGCGAGTTTGCTAGCTACTACACCTCCCTTACCTCTTCCTGTGGAGTCACAGACTACCCGATCATCTCG CCGACTCCCTACACCGTATCGAGGACGGCGACAACGACGTCTCCATCTGCCAGCGCCTCAGAAAGTTGTGCATCC AGATACAATGCCAAGGAGGGAGATGACTGCCTCAGCGTCAGTAAGTCGCAGCGTGTGTCGACGGCGATGTTGCGA TTCCAGAACGGCATCGCCGCCGACTGTTCTAATTTTCCAGAGGCCGGAACGTCCCTCTGCATACCCGAGAGCTGT GAGCCTTATACGCTTCTGGCGAATGAGACCTGTCGTGGCATCAGTGAGGCACATAACGCTAGTTTCACAATGACC CAGCTCATCTCATGGAACCCCGACATCAACCGCGATTGCAGCAATTTGGAAGCGTTGACAGGGACTCAACTCTGC ATCAGTGCACCTGGAGACTCGACAGAGCCAGACGTCGCCTCAGCTACTTCGACGACTGTGGGACCAGTCCCCGCG CCGACAAATGTGGTAGACGGGACCAATCTTCGGTGCGGTAAGTACTACCAAGTAGCTCTGGGCGATACTTGCGCT TCCATCAGCGTGACGATGGGCATCAGCCTCCGTGACTTTTACTTCTTGGTAAGTACAACCCGGGACTGTTTTTCT CCGGTTGCCAACTCGGCTGATGCTGGCGCCAGAATCCCGAGGTCAATAGCGACTGTACCAATCTACTGGCCGGAT ACTCCTACTGCGTCCAGGCGGTTGGCAATATCGCAACCTATTCCGGACACAGTCCCCCCTAGCTGCTTGGCCACA AGCGTATCCACCGCCTCTGACTGGACGTTCCCGTCATTCACCACCACCAAGGCCACCAAGCCGACGCCGCTGCCC CTGGCTCCAGGAACGCTCTCCAATTGCTCAGAATACGCGGAGTACATCACAGCAAGGCAAAAGTCGTCGGCCATT AATGCATGCAATGTTGTGGCGAGCTTCTATGATGTGGCTGACACAAAAAGGACAGCGGACGTTGACGACTTTGTG TCGTGGAATCCATCACTATCGTACGATGCCAAACACTGGCTCGACTGCCAGCTCAAGCCAGGCTATCTGTACTGT GCCCATCCGGCTCTGCCAAAGGCAGCTACTACGTCCATGTCCACGTCGTCGGCATCGATGACAGCCACGATGTCT TCTTTCAGCAAGGGGGCTGCCTCATCGGCATCGACGACATCCGCGACGCCTCCTTCGAGGACGGGGTCCAACGGT GAACCAACGCCACTACCCATCCAGGCGGGCATGACGTCAGCATGCGGTGGGTTCTATCTTGTCAAGCCCGGCGAC GGCTGCTACGACATCGCTTCGGCAAACGAGATAGCTCTCGCAGACCTTTACTCGTGGAACCCAGCCCTGAAGGGT GACTGCTCTGGCTTGTACTACGGCTATTACATCTGTATCGGCTTGCTCTCCCGCACCGCCACTTCTTCCTGA |
Gene | >Hirsu2|6611 ATGGCTGTCCACCGCGGGGGCTCATGGTTGTCACTTGGGCTTCTGCTTGTGTTTGGCATATGGGTAGAAGCGCTG GCCTTTCTGCCAACCCTGGATGGCAGTGCATTTCATTTAGGAATCCCGGACCAGCTCTCCACACCCTGCCAGTGA GTATGGAAAGGGGGGGAGGCGGAGAGTTATATCAATATAGGGAAAGACAACATATACTGACTTGCTCAATCCCCT CCAGGACGGCATTCAACCAGACTACTCAGTGCAATGCCACGCTGGGAGCTGTCGCGTTCAATGGCTTCTTCCCCT CAAGCGACCAGTTGACTCTCATCTGTACGAAAGACTGCCTCGAATCTCTGGAGAATGTTCGCTCCAAGCAGGTCG AGTCCTGTTCGACGGAGTCTTATACCGTCGACGGGAAAGCCGTTCCGGCCACCTACGACGTGGACCGATTGCTTT TCACCTACAATTACACCTGTTTGCGAGATGGGTAAGATTTATTTCTTCTCCCACCCCAGAAAGTTACTGGTTCTA ACATATTGGAAGAATCACCAAGGACTTCTGCGCTCCTCTTGTCGATGAATGGTCACAAAATGAGGAGCCAACGTC CAACCAGTCCTGCTCCGATTGCATGTTGCACACTTTCCAGGTAGAACTTAACTCGCCATTCGGTTACGATAGCGA GTTTGCTAGCTACTACACCTCCCTTACCTCTTCGTATGCGAATATGGGACCGCTCTCTCGTTATATTCCGATACT GATGCCTCTTCAGCTGTGGAGTCACAGACTACCCGATCATCTCGCCGACTCCCTACACCGTATCGAGGACGGCGA CAACGACGTCTCCATCTGCCAGCGCCTCAGAAAGTTGTGCATCCAGATACAATGCCAAGGAGGGAGATGACTGCC TCAGCGTCAGTAAGTCGCAGCGTGTGTCGACGGCGATGTTGCGATTCCAGAACGGCATCGCCGCCGACTGTTCTA ATTTTCCAGAGGCCGGAACGTCCCTCTGCATACCCGAGAGCTGTGAGCCTTATACGCTTCTGGCGAATGAGACCT GTCGTGGCATCAGTGAGGCACATAACGCTAGTTTCACAATGACCCAGCTCATCTCATGGAACCCCGACATCAACC GCGATTGCAGCAATTTGGAAGCGTTGACAGGGACTCAACTCTGCATCAGGTATAACGGGTCTCGCGGGGTATTCG ATTCGCTCTGTCGTGGTACTGATAGCTGTTCGCAGTGCACCTGGAGACTCGACAGAGCCAGACGTCGCCTCAGCT ACTTCGACGACTGTGGGACCAGTGTACGTGCAGTATCGCCATCAAGTCCCCTGCCATGGCTTTCATTGAACGCAT TCTTACCACTTTTCAGCCCCGCGCCGACAAATGTGGTAGACGGGACCAATCTTCGGTGCGGTAAGTACTACCAAG TAGCTCTGGGCGATACTTGCGCTTCCATCAGCGTGACGATGGGCATCAGCCTCCGTGACTTTTACTTCTTGGTAA GTACAACCCGGGACTGTTTTTCTCCGGTTGCCAACTCGGCTGATGCTGGCGCCAGAATCCCGAGGTCAATAGCGA CTGTACCAATCTACTGGCCGGATACTCCTACTGCGTCCAGGCGGTTGGCAATATCGCAACCTATTCCGGACACAG GTAAGTTCATTCCAGCCCCCCCACCCCCCCCCCCCGCCCGCAGGACCTCGCTGACTGAGACGTACTCAGCGGAAG TGTAAACCCCTGCCATAAGACTTTTCCAGTCCCCCCTAGCTGCTTGGCCACAAGCGTATCCACCGCCTCTGACTG GACGTTCCCGTCATTCACCACCACCAAGGCCACCAAGCCGACGCCGCTGCCCCTGGCTCCAGGAACGCTCTCCAA TTGCTCAGAATACGCGGAGTACATCACAGCAAGGCAAAAGTCGTCGGCCATTAATGCATGCAATGTTGTGGCGAG CTTCTATGATGGTAAGAATCGCAGCCAGTCCAGCAGGCTGGGAACTTGAATGGCCGCAGTGGCTGACACAAAAAG GACAGCGGACGTTGACGACTTTGTGTCGTGGAATCCATCACTATCGTACGATGCCAAACACTGGCTCGACTGCCA GCTCAAGCCAGGCTATCTGTACTGTGCCCATCCGGCTCTGCCAAAGGCAGCTACTACGTCCATGTCCACGTCGTC GGCATCGATGACAGCCACGATGTCTTCTTTCAGCAAGGGGGCTGCCTCATCGGCATCGACGACATCCGCGACGCC TCCTTCGAGGACGGGGTCCAACGGTGAACCAACGCCACTACCCATCCAGGTACGCCCCTGTCATCACACGTTTCA TGAGATTAGGGGCGAGTAGCTGAATGTGTGCCAAGGCGGGCATGACGTCAGCATGCGGTGGGTTCTATCTTGTCA AGCCCGGCGACGGCTGCTACGACATCGCTTCGGCAAACGAGATAGCTCTCGCAGACCTTTACTCGTGGAACCCAG CCCTGAAGGGTGACTGCTCTGGCTTGTACTACGGCTATTACATCTGTATCGGCTTGCTCTCCCGCACCGCCACTT CTTCCTGA |