Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6611
Gene name
LocationContig_344:6669..9227
Strand+
Gene length (bp)2558
Transcript length (bp)2022
Coding sequence length (bp)2022
Protein length (aa) 674

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01476 LysM LysM domain 6.4E-05 619 663

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|D4AVW3|LYSM5_ARTBC LysM domain-containing protein ARB_00327 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_00327 PE=3 SV=2 309 665 2.0E-20
sp|D4ALG0|LYSM1_ARTBC LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 271 666 7.0E-19
sp|D4ALG0|LYSM1_ARTBC LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 306 666 3.0E-11
sp|D4ALG0|LYSM1_ARTBC LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 552 668 3.0E-09
sp|D4B5F9|PGDA_ARTBC Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03699 PE=1 SV=2 611 665 9.0E-09
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|D4AVW3|LYSM5_ARTBC LysM domain-containing protein ARB_00327 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_00327 PE=3 SV=2 309 665 2.0E-20
sp|D4ALG0|LYSM1_ARTBC LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 271 666 7.0E-19
sp|D4ALG0|LYSM1_ARTBC LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 306 666 3.0E-11
sp|D4ALG0|LYSM1_ARTBC LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 552 668 3.0E-09
sp|D4B5F9|PGDA_ARTBC Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03699 PE=1 SV=2 611 665 9.0E-09
sp|D4AZ68|LYSM3_ARTBC LysM domain-containing protein ARB_01488 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01488 PE=3 SV=1 604 663 1.0E-07
sp|D4B4P8|LYSM2_ARTBC LysM domain-containing protein ARB_03438 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03438 PE=3 SV=1 523 665 3.0E-07
sp|D4ALG0|LYSM1_ARTBC LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05157 PE=1 SV=1 222 388 1.0E-06
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1527 0.1268 0.9277 0.2369 0.0595 0.0232 0.2025 0.1771 0.1668 0.0043

SignalP

SignalP signal predicted Location Score
Yes 1 - 26 0.994179

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup721
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2604
Ophiocordyceps australis 1348a (Ghana) OphauG2|2724
Ophiocordyceps australis map64 (Brazil) OphauB2|3492
Ophiocordyceps subramaniannii Hirsu2|1709
Ophiocordyceps subramaniannii Hirsu2|6611 (this protein)
Ophiocordyceps subramaniannii Hirsu2|8953

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6611
MAVHRGGSWLSLGLLLVFGIWVEALAFLPTLDGSAFHLGIPDQLSTPCQTAFNQTTQCNATLGAVAFNGFFPSSD
QLTLICTKDCLESLENVRSKQVESCSTESYTVDGKAVPATYDVDRLLFTYNYTCLRDGITKDFCAPLVDEWSQNE
EPTSNQSCSDCMLHTFQVELNSPFGYDSEFASYYTSLTSSCGVTDYPIISPTPYTVSRTATTTSPSASASESCAS
RYNAKEGDDCLSVSKSQRVSTAMLRFQNGIAADCSNFPEAGTSLCIPESCEPYTLLANETCRGISEAHNASFTMT
QLISWNPDINRDCSNLEALTGTQLCISAPGDSTEPDVASATSTTVGPVPAPTNVVDGTNLRCGKYYQVALGDTCA
SISVTMGISLRDFYFLVSTTRDCFSPVANSADAGARIPRSIATVPIYWPDTPTASRRLAISQPIPDTVPPSCLAT
SVSTASDWTFPSFTTTKATKPTPLPLAPGTLSNCSEYAEYITARQKSSAINACNVVASFYDVADTKRTADVDDFV
SWNPSLSYDAKHWLDCQLKPGYLYCAHPALPKAATTSMSTSSASMTATMSSFSKGAASSASTTSATPPSRTGSNG
EPTPLPIQAGMTSACGGFYLVKPGDGCYDIASANEIALADLYSWNPALKGDCSGLYYGYYICIGLLSRTATSS*
Coding >Hirsu2|6611
ATGGCTGTCCACCGCGGGGGCTCATGGTTGTCACTTGGGCTTCTGCTTGTGTTTGGCATATGGGTAGAAGCGCTG
GCCTTTCTGCCAACCCTGGATGGCAGTGCATTTCATTTAGGAATCCCGGACCAGCTCTCCACACCCTGCCAGACG
GCATTCAACCAGACTACTCAGTGCAATGCCACGCTGGGAGCTGTCGCGTTCAATGGCTTCTTCCCCTCAAGCGAC
CAGTTGACTCTCATCTGTACGAAAGACTGCCTCGAATCTCTGGAGAATGTTCGCTCCAAGCAGGTCGAGTCCTGT
TCGACGGAGTCTTATACCGTCGACGGGAAAGCCGTTCCGGCCACCTACGACGTGGACCGATTGCTTTTCACCTAC
AATTACACCTGTTTGCGAGATGGAATCACCAAGGACTTCTGCGCTCCTCTTGTCGATGAATGGTCACAAAATGAG
GAGCCAACGTCCAACCAGTCCTGCTCCGATTGCATGTTGCACACTTTCCAGGTAGAACTTAACTCGCCATTCGGT
TACGATAGCGAGTTTGCTAGCTACTACACCTCCCTTACCTCTTCCTGTGGAGTCACAGACTACCCGATCATCTCG
CCGACTCCCTACACCGTATCGAGGACGGCGACAACGACGTCTCCATCTGCCAGCGCCTCAGAAAGTTGTGCATCC
AGATACAATGCCAAGGAGGGAGATGACTGCCTCAGCGTCAGTAAGTCGCAGCGTGTGTCGACGGCGATGTTGCGA
TTCCAGAACGGCATCGCCGCCGACTGTTCTAATTTTCCAGAGGCCGGAACGTCCCTCTGCATACCCGAGAGCTGT
GAGCCTTATACGCTTCTGGCGAATGAGACCTGTCGTGGCATCAGTGAGGCACATAACGCTAGTTTCACAATGACC
CAGCTCATCTCATGGAACCCCGACATCAACCGCGATTGCAGCAATTTGGAAGCGTTGACAGGGACTCAACTCTGC
ATCAGTGCACCTGGAGACTCGACAGAGCCAGACGTCGCCTCAGCTACTTCGACGACTGTGGGACCAGTCCCCGCG
CCGACAAATGTGGTAGACGGGACCAATCTTCGGTGCGGTAAGTACTACCAAGTAGCTCTGGGCGATACTTGCGCT
TCCATCAGCGTGACGATGGGCATCAGCCTCCGTGACTTTTACTTCTTGGTAAGTACAACCCGGGACTGTTTTTCT
CCGGTTGCCAACTCGGCTGATGCTGGCGCCAGAATCCCGAGGTCAATAGCGACTGTACCAATCTACTGGCCGGAT
ACTCCTACTGCGTCCAGGCGGTTGGCAATATCGCAACCTATTCCGGACACAGTCCCCCCTAGCTGCTTGGCCACA
AGCGTATCCACCGCCTCTGACTGGACGTTCCCGTCATTCACCACCACCAAGGCCACCAAGCCGACGCCGCTGCCC
CTGGCTCCAGGAACGCTCTCCAATTGCTCAGAATACGCGGAGTACATCACAGCAAGGCAAAAGTCGTCGGCCATT
AATGCATGCAATGTTGTGGCGAGCTTCTATGATGTGGCTGACACAAAAAGGACAGCGGACGTTGACGACTTTGTG
TCGTGGAATCCATCACTATCGTACGATGCCAAACACTGGCTCGACTGCCAGCTCAAGCCAGGCTATCTGTACTGT
GCCCATCCGGCTCTGCCAAAGGCAGCTACTACGTCCATGTCCACGTCGTCGGCATCGATGACAGCCACGATGTCT
TCTTTCAGCAAGGGGGCTGCCTCATCGGCATCGACGACATCCGCGACGCCTCCTTCGAGGACGGGGTCCAACGGT
GAACCAACGCCACTACCCATCCAGGCGGGCATGACGTCAGCATGCGGTGGGTTCTATCTTGTCAAGCCCGGCGAC
GGCTGCTACGACATCGCTTCGGCAAACGAGATAGCTCTCGCAGACCTTTACTCGTGGAACCCAGCCCTGAAGGGT
GACTGCTCTGGCTTGTACTACGGCTATTACATCTGTATCGGCTTGCTCTCCCGCACCGCCACTTCTTCCTGA
Transcript >Hirsu2|6611
ATGGCTGTCCACCGCGGGGGCTCATGGTTGTCACTTGGGCTTCTGCTTGTGTTTGGCATATGGGTAGAAGCGCTG
GCCTTTCTGCCAACCCTGGATGGCAGTGCATTTCATTTAGGAATCCCGGACCAGCTCTCCACACCCTGCCAGACG
GCATTCAACCAGACTACTCAGTGCAATGCCACGCTGGGAGCTGTCGCGTTCAATGGCTTCTTCCCCTCAAGCGAC
CAGTTGACTCTCATCTGTACGAAAGACTGCCTCGAATCTCTGGAGAATGTTCGCTCCAAGCAGGTCGAGTCCTGT
TCGACGGAGTCTTATACCGTCGACGGGAAAGCCGTTCCGGCCACCTACGACGTGGACCGATTGCTTTTCACCTAC
AATTACACCTGTTTGCGAGATGGAATCACCAAGGACTTCTGCGCTCCTCTTGTCGATGAATGGTCACAAAATGAG
GAGCCAACGTCCAACCAGTCCTGCTCCGATTGCATGTTGCACACTTTCCAGGTAGAACTTAACTCGCCATTCGGT
TACGATAGCGAGTTTGCTAGCTACTACACCTCCCTTACCTCTTCCTGTGGAGTCACAGACTACCCGATCATCTCG
CCGACTCCCTACACCGTATCGAGGACGGCGACAACGACGTCTCCATCTGCCAGCGCCTCAGAAAGTTGTGCATCC
AGATACAATGCCAAGGAGGGAGATGACTGCCTCAGCGTCAGTAAGTCGCAGCGTGTGTCGACGGCGATGTTGCGA
TTCCAGAACGGCATCGCCGCCGACTGTTCTAATTTTCCAGAGGCCGGAACGTCCCTCTGCATACCCGAGAGCTGT
GAGCCTTATACGCTTCTGGCGAATGAGACCTGTCGTGGCATCAGTGAGGCACATAACGCTAGTTTCACAATGACC
CAGCTCATCTCATGGAACCCCGACATCAACCGCGATTGCAGCAATTTGGAAGCGTTGACAGGGACTCAACTCTGC
ATCAGTGCACCTGGAGACTCGACAGAGCCAGACGTCGCCTCAGCTACTTCGACGACTGTGGGACCAGTCCCCGCG
CCGACAAATGTGGTAGACGGGACCAATCTTCGGTGCGGTAAGTACTACCAAGTAGCTCTGGGCGATACTTGCGCT
TCCATCAGCGTGACGATGGGCATCAGCCTCCGTGACTTTTACTTCTTGGTAAGTACAACCCGGGACTGTTTTTCT
CCGGTTGCCAACTCGGCTGATGCTGGCGCCAGAATCCCGAGGTCAATAGCGACTGTACCAATCTACTGGCCGGAT
ACTCCTACTGCGTCCAGGCGGTTGGCAATATCGCAACCTATTCCGGACACAGTCCCCCCTAGCTGCTTGGCCACA
AGCGTATCCACCGCCTCTGACTGGACGTTCCCGTCATTCACCACCACCAAGGCCACCAAGCCGACGCCGCTGCCC
CTGGCTCCAGGAACGCTCTCCAATTGCTCAGAATACGCGGAGTACATCACAGCAAGGCAAAAGTCGTCGGCCATT
AATGCATGCAATGTTGTGGCGAGCTTCTATGATGTGGCTGACACAAAAAGGACAGCGGACGTTGACGACTTTGTG
TCGTGGAATCCATCACTATCGTACGATGCCAAACACTGGCTCGACTGCCAGCTCAAGCCAGGCTATCTGTACTGT
GCCCATCCGGCTCTGCCAAAGGCAGCTACTACGTCCATGTCCACGTCGTCGGCATCGATGACAGCCACGATGTCT
TCTTTCAGCAAGGGGGCTGCCTCATCGGCATCGACGACATCCGCGACGCCTCCTTCGAGGACGGGGTCCAACGGT
GAACCAACGCCACTACCCATCCAGGCGGGCATGACGTCAGCATGCGGTGGGTTCTATCTTGTCAAGCCCGGCGAC
GGCTGCTACGACATCGCTTCGGCAAACGAGATAGCTCTCGCAGACCTTTACTCGTGGAACCCAGCCCTGAAGGGT
GACTGCTCTGGCTTGTACTACGGCTATTACATCTGTATCGGCTTGCTCTCCCGCACCGCCACTTCTTCCTGA
Gene >Hirsu2|6611
ATGGCTGTCCACCGCGGGGGCTCATGGTTGTCACTTGGGCTTCTGCTTGTGTTTGGCATATGGGTAGAAGCGCTG
GCCTTTCTGCCAACCCTGGATGGCAGTGCATTTCATTTAGGAATCCCGGACCAGCTCTCCACACCCTGCCAGTGA
GTATGGAAAGGGGGGGAGGCGGAGAGTTATATCAATATAGGGAAAGACAACATATACTGACTTGCTCAATCCCCT
CCAGGACGGCATTCAACCAGACTACTCAGTGCAATGCCACGCTGGGAGCTGTCGCGTTCAATGGCTTCTTCCCCT
CAAGCGACCAGTTGACTCTCATCTGTACGAAAGACTGCCTCGAATCTCTGGAGAATGTTCGCTCCAAGCAGGTCG
AGTCCTGTTCGACGGAGTCTTATACCGTCGACGGGAAAGCCGTTCCGGCCACCTACGACGTGGACCGATTGCTTT
TCACCTACAATTACACCTGTTTGCGAGATGGGTAAGATTTATTTCTTCTCCCACCCCAGAAAGTTACTGGTTCTA
ACATATTGGAAGAATCACCAAGGACTTCTGCGCTCCTCTTGTCGATGAATGGTCACAAAATGAGGAGCCAACGTC
CAACCAGTCCTGCTCCGATTGCATGTTGCACACTTTCCAGGTAGAACTTAACTCGCCATTCGGTTACGATAGCGA
GTTTGCTAGCTACTACACCTCCCTTACCTCTTCGTATGCGAATATGGGACCGCTCTCTCGTTATATTCCGATACT
GATGCCTCTTCAGCTGTGGAGTCACAGACTACCCGATCATCTCGCCGACTCCCTACACCGTATCGAGGACGGCGA
CAACGACGTCTCCATCTGCCAGCGCCTCAGAAAGTTGTGCATCCAGATACAATGCCAAGGAGGGAGATGACTGCC
TCAGCGTCAGTAAGTCGCAGCGTGTGTCGACGGCGATGTTGCGATTCCAGAACGGCATCGCCGCCGACTGTTCTA
ATTTTCCAGAGGCCGGAACGTCCCTCTGCATACCCGAGAGCTGTGAGCCTTATACGCTTCTGGCGAATGAGACCT
GTCGTGGCATCAGTGAGGCACATAACGCTAGTTTCACAATGACCCAGCTCATCTCATGGAACCCCGACATCAACC
GCGATTGCAGCAATTTGGAAGCGTTGACAGGGACTCAACTCTGCATCAGGTATAACGGGTCTCGCGGGGTATTCG
ATTCGCTCTGTCGTGGTACTGATAGCTGTTCGCAGTGCACCTGGAGACTCGACAGAGCCAGACGTCGCCTCAGCT
ACTTCGACGACTGTGGGACCAGTGTACGTGCAGTATCGCCATCAAGTCCCCTGCCATGGCTTTCATTGAACGCAT
TCTTACCACTTTTCAGCCCCGCGCCGACAAATGTGGTAGACGGGACCAATCTTCGGTGCGGTAAGTACTACCAAG
TAGCTCTGGGCGATACTTGCGCTTCCATCAGCGTGACGATGGGCATCAGCCTCCGTGACTTTTACTTCTTGGTAA
GTACAACCCGGGACTGTTTTTCTCCGGTTGCCAACTCGGCTGATGCTGGCGCCAGAATCCCGAGGTCAATAGCGA
CTGTACCAATCTACTGGCCGGATACTCCTACTGCGTCCAGGCGGTTGGCAATATCGCAACCTATTCCGGACACAG
GTAAGTTCATTCCAGCCCCCCCACCCCCCCCCCCCGCCCGCAGGACCTCGCTGACTGAGACGTACTCAGCGGAAG
TGTAAACCCCTGCCATAAGACTTTTCCAGTCCCCCCTAGCTGCTTGGCCACAAGCGTATCCACCGCCTCTGACTG
GACGTTCCCGTCATTCACCACCACCAAGGCCACCAAGCCGACGCCGCTGCCCCTGGCTCCAGGAACGCTCTCCAA
TTGCTCAGAATACGCGGAGTACATCACAGCAAGGCAAAAGTCGTCGGCCATTAATGCATGCAATGTTGTGGCGAG
CTTCTATGATGGTAAGAATCGCAGCCAGTCCAGCAGGCTGGGAACTTGAATGGCCGCAGTGGCTGACACAAAAAG
GACAGCGGACGTTGACGACTTTGTGTCGTGGAATCCATCACTATCGTACGATGCCAAACACTGGCTCGACTGCCA
GCTCAAGCCAGGCTATCTGTACTGTGCCCATCCGGCTCTGCCAAAGGCAGCTACTACGTCCATGTCCACGTCGTC
GGCATCGATGACAGCCACGATGTCTTCTTTCAGCAAGGGGGCTGCCTCATCGGCATCGACGACATCCGCGACGCC
TCCTTCGAGGACGGGGTCCAACGGTGAACCAACGCCACTACCCATCCAGGTACGCCCCTGTCATCACACGTTTCA
TGAGATTAGGGGCGAGTAGCTGAATGTGTGCCAAGGCGGGCATGACGTCAGCATGCGGTGGGTTCTATCTTGTCA
AGCCCGGCGACGGCTGCTACGACATCGCTTCGGCAAACGAGATAGCTCTCGCAGACCTTTACTCGTGGAACCCAG
CCCTGAAGGGTGACTGCTCTGGCTTGTACTACGGCTATTACATCTGTATCGGCTTGCTCTCCCGCACCGCCACTT
CTTCCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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