© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6582 |
| Gene name | |
| Location | Contig_341:6176..7299 |
| Strand | + |
| Gene length (bp) | 1123 |
| Transcript length (bp) | 1065 |
| Coding sequence length (bp) | 1065 |
| Protein length (aa) | 355 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01544 | CorA | CorA-like Mg2+ transporter protein | 2.5E-41 | 45 | 349 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13657|YBCC_SCHPO | Putative metal ion transporter C27B12.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pi066 PE=1 SV=1 | 5 | 353 | 1.0E-117 |
| sp|O13779|YF2E_SCHPO | Putative metal ion transporter C17A12.14 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17A2.14 PE=1 SV=4 | 5 | 354 | 4.0E-110 |
| sp|P43553|ALR2_YEAST | Magnesium transporter ALR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALR2 PE=1 SV=1 | 4 | 347 | 6.0E-104 |
| sp|Q08269|ALR1_YEAST | Magnesium transporter ALR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALR1 PE=1 SV=1 | 4 | 324 | 7.0E-101 |
| sp|P35724|MNR2_YEAST | Manganese resistance protein MNR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNR2 PE=1 SV=1 | 197 | 349 | 3.0E-41 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13657|YBCC_SCHPO | Putative metal ion transporter C27B12.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pi066 PE=1 SV=1 | 5 | 353 | 1.0E-117 |
| sp|O13779|YF2E_SCHPO | Putative metal ion transporter C17A12.14 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17A2.14 PE=1 SV=4 | 5 | 354 | 4.0E-110 |
| sp|P43553|ALR2_YEAST | Magnesium transporter ALR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALR2 PE=1 SV=1 | 4 | 347 | 6.0E-104 |
| sp|Q08269|ALR1_YEAST | Magnesium transporter ALR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALR1 PE=1 SV=1 | 4 | 324 | 7.0E-101 |
| sp|P35724|MNR2_YEAST | Manganese resistance protein MNR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNR2 PE=1 SV=1 | 197 | 349 | 3.0E-41 |
| sp|Q9WZ31|CORA_THEMA | Magnesium transport protein CorA OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=corA PE=1 SV=1 | 38 | 315 | 1.0E-22 |
| sp|P35724|MNR2_YEAST | Manganese resistance protein MNR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNR2 PE=1 SV=1 | 104 | 191 | 2.0E-21 |
| sp|O31543|YFJQ_BACSU | Putative metal ion transporter YfjQ OS=Bacillus subtilis (strain 168) GN=yfjQ PE=3 SV=1 | 41 | 350 | 3.0E-16 |
| sp|P35724|MNR2_YEAST | Manganese resistance protein MNR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNR2 PE=1 SV=1 | 5 | 104 | 2.0E-14 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0030001 | metal ion transport | Yes |
| GO:0046873 | metal ion transmembrane transporter activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0006811 | ion transport | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0008324 | cation transmembrane transporter activity | No |
| GO:0022890 | inorganic cation transmembrane transporter activity | No |
| GO:0006812 | cation transport | No |
| GO:0006810 | transport | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 297 | 319 | 22 |
| 2 | 329 | 348 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6582 MDKNRFSFFSSAWESTIHAAEMGDLVLPGEDIRGLFELPKDEADGVWWLNVNCASKEEVHGICKAFGVHPLTIED IITQEAREKIELFPSYYFACFRSFNVVKEPDGVEYEPFNIYVLVFRQGTLSFSFAPNSHASQVRKRITALKEYVS LSSDWICYALIDNIVDSFAPVIRTIELEADAIEDEVFVMRQDDSSSFLRSIGRVRKNCMALLRLLGGKADVLRGF TKRCNENYQVTPHMDIGMYLGDIQDHVVTMATNLGHFEKMLSRAHSNYLATLSINSISQGTDTNRVLSKITFLAS VLVPLNLVSGVFGMNVAVPFGNSGGRLEPFFGIIGCMILICSLILGWARWKRYI* |
| Coding | >Hirsu2|6582 ATGGACAAAAATCGGTTCAGCTTCTTTTCGTCCGCCTGGGAATCGACAATTCATGCTGCCGAAATGGGCGACCTC GTGCTACCGGGCGAAGATATTCGCGGCCTTTTCGAGCTCCCCAAAGACGAGGCAGACGGGGTGTGGTGGTTGAAC GTTAATTGTGCCTCCAAAGAGGAGGTGCATGGTATCTGCAAAGCCTTTGGCGTCCACCCTCTCACGATTGAGGAT ATCATTACCCAGGAGGCCCGGGAGAAGATCGAACTGTTTCCTTCCTATTACTTTGCGTGTTTCCGATCCTTCAAC GTCGTCAAGGAGCCCGACGGAGTCGAGTACGAGCCATTCAACATTTATGTGCTCGTTTTCCGTCAAGGCACGCTT AGCTTCAGCTTTGCCCCCAACTCGCATGCGTCTCAGGTCCGCAAGCGAATAACGGCACTCAAGGAGTACGTGTCT TTAAGCAGCGACTGGATCTGCTACGCGCTAATCGACAATATCGTGGATTCGTTTGCCCCGGTCATCCGGACGATC GAGCTTGAAGCCGACGCCATCGAGGATGAGGTGTTTGTCATGAGACAGGACGACTCGAGTTCGTTTCTGCGGTCG ATAGGACGAGTTCGCAAAAACTGCATGGCCCTGCTGAGGTTGCTGGGTGGCAAAGCCGATGTCCTGCGCGGTTTC ACGAAGCGGTGCAACGAGAACTACCAAGTGACGCCACACATGGATATCGGCATGTATCTTGGCGACATTCAAGAC CATGTTGTGACCATGGCAACAAACCTGGGTCACTTTGAGAAGATGCTGTCTCGGGCGCACAGCAACTACCTGGCC ACGCTGTCCATTAATAGTATCTCACAGGGAACCGACACCAACCGCGTCCTGAGCAAGATCACTTTTCTCGCCTCA GTCTTGGTGCCCCTGAATTTGGTGAGCGGTGTCTTCGGCATGAACGTGGCTGTCCCCTTTGGAAACTCGGGCGGC CGTCTGGAGCCCTTCTTTGGCATAATTGGATGCATGATTCTCATTTGTTCGCTGATCCTCGGCTGGGCGCGATGG AAGCGTTACATTTGA |
| Transcript | >Hirsu2|6582 ATGGACAAAAATCGGTTCAGCTTCTTTTCGTCCGCCTGGGAATCGACAATTCATGCTGCCGAAATGGGCGACCTC GTGCTACCGGGCGAAGATATTCGCGGCCTTTTCGAGCTCCCCAAAGACGAGGCAGACGGGGTGTGGTGGTTGAAC GTTAATTGTGCCTCCAAAGAGGAGGTGCATGGTATCTGCAAAGCCTTTGGCGTCCACCCTCTCACGATTGAGGAT ATCATTACCCAGGAGGCCCGGGAGAAGATCGAACTGTTTCCTTCCTATTACTTTGCGTGTTTCCGATCCTTCAAC GTCGTCAAGGAGCCCGACGGAGTCGAGTACGAGCCATTCAACATTTATGTGCTCGTTTTCCGTCAAGGCACGCTT AGCTTCAGCTTTGCCCCCAACTCGCATGCGTCTCAGGTCCGCAAGCGAATAACGGCACTCAAGGAGTACGTGTCT TTAAGCAGCGACTGGATCTGCTACGCGCTAATCGACAATATCGTGGATTCGTTTGCCCCGGTCATCCGGACGATC GAGCTTGAAGCCGACGCCATCGAGGATGAGGTGTTTGTCATGAGACAGGACGACTCGAGTTCGTTTCTGCGGTCG ATAGGACGAGTTCGCAAAAACTGCATGGCCCTGCTGAGGTTGCTGGGTGGCAAAGCCGATGTCCTGCGCGGTTTC ACGAAGCGGTGCAACGAGAACTACCAAGTGACGCCACACATGGATATCGGCATGTATCTTGGCGACATTCAAGAC CATGTTGTGACCATGGCAACAAACCTGGGTCACTTTGAGAAGATGCTGTCTCGGGCGCACAGCAACTACCTGGCC ACGCTGTCCATTAATAGTATCTCACAGGGAACCGACACCAACCGCGTCCTGAGCAAGATCACTTTTCTCGCCTCA GTCTTGGTGCCCCTGAATTTGGTGAGCGGTGTCTTCGGCATGAACGTGGCTGTCCCCTTTGGAAACTCGGGCGGC CGTCTGGAGCCCTTCTTTGGCATAATTGGATGCATGATTCTCATTTGTTCGCTGATCCTCGGCTGGGCGCGATGG AAGCGTTACATTTGA |
| Gene | >Hirsu2|6582 ATGGACAAAAATCGGTTCAGCTTCTTTTCGTCCGCCTGGGAATCGACAATTCATGCTGCCGAAATGGGCGACCTC GTGCTACCGGGCGAAGATATTCGCGGCCTTTTCGAGCTCCCCAAAGACGAGGCAGACGGGGTGTGGTGGTTGAAC GTTAATTGTGCCTCCAAAGAGGAGGTGCATGGTATCTGCAAAGCCTTTGGCGTCCACCCTCTCACGATTGAGGAT ATCATTACCCAGGAGGCCCGGGAGAAGATCGAACTGTTTCCTTCCTATTACTTTGCGTGTTTCCGATCCTTCAAC GTCGTCAAGGAGCCCGACGGAGTCGAGTACGAGCCATTCAACATTTATGTGCTCGTTTTCCGTCAAGGCACGCTT AGCTTCAGCTTTGCCCCCAACTCGCATGCGTCTCAGGTCCGCAAGCGAATAACGGCACTCAAGGAGTACGTGTCT TTAAGCAGCGACTGGATCTGCTACGCGCTAATGTAGGTCCCTCGCCTGCCTTCACTTTCGTCGCTCTGACTAACG GGTAGCCTGCCGTAGCGACAATATCGTGGATTCGTTTGCCCCGGTCATCCGGACGATCGAGCTTGAAGCCGACGC CATCGAGGATGAGGTGTTTGTCATGAGACAGGACGACTCGAGTTCGTTTCTGCGGTCGATAGGACGAGTTCGCAA AAACTGCATGGCCCTGCTGAGGTTGCTGGGTGGCAAAGCCGATGTCCTGCGCGGTTTCACGAAGCGGTGCAACGA GAACTACCAAGTGACGCCACACATGGATATCGGCATGTATCTTGGCGACATTCAAGACCATGTTGTGACCATGGC AACAAACCTGGGTCACTTTGAGAAGATGCTGTCTCGGGCGCACAGCAACTACCTGGCCACGCTGTCCATTAATAG TATCTCACAGGGAACCGACACCAACCGCGTCCTGAGCAAGATCACTTTTCTCGCCTCAGTCTTGGTGCCCCTGAA TTTGGTGAGCGGTGTCTTCGGCATGAACGTGGCTGTCCCCTTTGGAAACTCGGGCGGCCGTCTGGAGCCCTTCTT TGGCATAATTGGATGCATGATTCTCATTTGTTCGCTGATCCTCGGCTGGGCGCGATGGAAGCGTTACATTTGA |