Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6582
Gene name
LocationContig_341:6176..7299
Strand+
Gene length (bp)1123
Transcript length (bp)1065
Coding sequence length (bp)1065
Protein length (aa) 355

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01544 CorA CorA-like Mg2+ transporter protein 9.2E-43 45 349

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O13657|YBCC_SCHPO Putative metal ion transporter C27B12.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pi066 PE=1 SV=1 5 353 1.0E-117
sp|O13779|YF2E_SCHPO Putative metal ion transporter C17A12.14 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17A2.14 PE=1 SV=4 5 354 4.0E-110
sp|P43553|ALR2_YEAST Magnesium transporter ALR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALR2 PE=1 SV=1 4 347 6.0E-104
sp|Q08269|ALR1_YEAST Magnesium transporter ALR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALR1 PE=1 SV=1 4 324 7.0E-101
sp|P35724|MNR2_YEAST Manganese resistance protein MNR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNR2 PE=1 SV=1 197 349 3.0E-41
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O13657|YBCC_SCHPO Putative metal ion transporter C27B12.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pi066 PE=1 SV=1 5 353 1.0E-117
sp|O13779|YF2E_SCHPO Putative metal ion transporter C17A12.14 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17A2.14 PE=1 SV=4 5 354 4.0E-110
sp|P43553|ALR2_YEAST Magnesium transporter ALR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALR2 PE=1 SV=1 4 347 6.0E-104
sp|Q08269|ALR1_YEAST Magnesium transporter ALR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALR1 PE=1 SV=1 4 324 7.0E-101
sp|P35724|MNR2_YEAST Manganese resistance protein MNR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNR2 PE=1 SV=1 197 349 3.0E-41
sp|Q9WZ31|CORA_THEMA Magnesium transport protein CorA OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=corA PE=1 SV=1 38 315 1.0E-22
sp|P35724|MNR2_YEAST Manganese resistance protein MNR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNR2 PE=1 SV=1 104 191 2.0E-21
sp|O31543|YFJQ_BACSU Putative metal ion transporter YfjQ OS=Bacillus subtilis (strain 168) GN=yfjQ PE=3 SV=1 41 350 3.0E-16
sp|P35724|MNR2_YEAST Manganese resistance protein MNR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNR2 PE=1 SV=1 5 104 2.0E-14
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GO

GO Term Description Terminal node
GO:0046873 metal ion transmembrane transporter activity Yes
GO:0030001 metal ion transport Yes
GO:0055085 transmembrane transport Yes
GO:0016020 membrane Yes
GO:0008324 cation transmembrane transporter activity No
GO:0008150 biological_process No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0006811 ion transport No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0015075 ion transmembrane transporter activity No
GO:0006812 cation transport No
GO:0006810 transport No
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0022857 transmembrane transporter activity No
GO:0005575 cellular_component No
GO:0005215 transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 297 319 22
2 329 348 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6582
MDKNRFSFFSSAWESTIHAAEMGDLVLPGEDIRGLFELPKDEADGVWWLNVNCASKEEVHGICKAFGVHPLTIED
IITQEAREKIELFPSYYFACFRSFNVVKEPDGVEYEPFNIYVLVFRQGTLSFSFAPNSHASQVRKRITALKEYVS
LSSDWICYALIDNIVDSFAPVIRTIELEADAIEDEVFVMRQDDSSSFLRSIGRVRKNCMALLRLLGGKADVLRGF
TKRCNENYQVTPHMDIGMYLGDIQDHVVTMATNLGHFEKMLSRAHSNYLATLSINSISQGTDTNRVLSKITFLAS
VLVPLNLVSGVFGMNVAVPFGNSGGRLEPFFGIIGCMILICSLILGWARWKRYI*
Coding >Hirsu2|6582
ATGGACAAAAATCGGTTCAGCTTCTTTTCGTCCGCCTGGGAATCGACAATTCATGCTGCCGAAATGGGCGACCTC
GTGCTACCGGGCGAAGATATTCGCGGCCTTTTCGAGCTCCCCAAAGACGAGGCAGACGGGGTGTGGTGGTTGAAC
GTTAATTGTGCCTCCAAAGAGGAGGTGCATGGTATCTGCAAAGCCTTTGGCGTCCACCCTCTCACGATTGAGGAT
ATCATTACCCAGGAGGCCCGGGAGAAGATCGAACTGTTTCCTTCCTATTACTTTGCGTGTTTCCGATCCTTCAAC
GTCGTCAAGGAGCCCGACGGAGTCGAGTACGAGCCATTCAACATTTATGTGCTCGTTTTCCGTCAAGGCACGCTT
AGCTTCAGCTTTGCCCCCAACTCGCATGCGTCTCAGGTCCGCAAGCGAATAACGGCACTCAAGGAGTACGTGTCT
TTAAGCAGCGACTGGATCTGCTACGCGCTAATCGACAATATCGTGGATTCGTTTGCCCCGGTCATCCGGACGATC
GAGCTTGAAGCCGACGCCATCGAGGATGAGGTGTTTGTCATGAGACAGGACGACTCGAGTTCGTTTCTGCGGTCG
ATAGGACGAGTTCGCAAAAACTGCATGGCCCTGCTGAGGTTGCTGGGTGGCAAAGCCGATGTCCTGCGCGGTTTC
ACGAAGCGGTGCAACGAGAACTACCAAGTGACGCCACACATGGATATCGGCATGTATCTTGGCGACATTCAAGAC
CATGTTGTGACCATGGCAACAAACCTGGGTCACTTTGAGAAGATGCTGTCTCGGGCGCACAGCAACTACCTGGCC
ACGCTGTCCATTAATAGTATCTCACAGGGAACCGACACCAACCGCGTCCTGAGCAAGATCACTTTTCTCGCCTCA
GTCTTGGTGCCCCTGAATTTGGTGAGCGGTGTCTTCGGCATGAACGTGGCTGTCCCCTTTGGAAACTCGGGCGGC
CGTCTGGAGCCCTTCTTTGGCATAATTGGATGCATGATTCTCATTTGTTCGCTGATCCTCGGCTGGGCGCGATGG
AAGCGTTACATTTGA
Transcript >Hirsu2|6582
ATGGACAAAAATCGGTTCAGCTTCTTTTCGTCCGCCTGGGAATCGACAATTCATGCTGCCGAAATGGGCGACCTC
GTGCTACCGGGCGAAGATATTCGCGGCCTTTTCGAGCTCCCCAAAGACGAGGCAGACGGGGTGTGGTGGTTGAAC
GTTAATTGTGCCTCCAAAGAGGAGGTGCATGGTATCTGCAAAGCCTTTGGCGTCCACCCTCTCACGATTGAGGAT
ATCATTACCCAGGAGGCCCGGGAGAAGATCGAACTGTTTCCTTCCTATTACTTTGCGTGTTTCCGATCCTTCAAC
GTCGTCAAGGAGCCCGACGGAGTCGAGTACGAGCCATTCAACATTTATGTGCTCGTTTTCCGTCAAGGCACGCTT
AGCTTCAGCTTTGCCCCCAACTCGCATGCGTCTCAGGTCCGCAAGCGAATAACGGCACTCAAGGAGTACGTGTCT
TTAAGCAGCGACTGGATCTGCTACGCGCTAATCGACAATATCGTGGATTCGTTTGCCCCGGTCATCCGGACGATC
GAGCTTGAAGCCGACGCCATCGAGGATGAGGTGTTTGTCATGAGACAGGACGACTCGAGTTCGTTTCTGCGGTCG
ATAGGACGAGTTCGCAAAAACTGCATGGCCCTGCTGAGGTTGCTGGGTGGCAAAGCCGATGTCCTGCGCGGTTTC
ACGAAGCGGTGCAACGAGAACTACCAAGTGACGCCACACATGGATATCGGCATGTATCTTGGCGACATTCAAGAC
CATGTTGTGACCATGGCAACAAACCTGGGTCACTTTGAGAAGATGCTGTCTCGGGCGCACAGCAACTACCTGGCC
ACGCTGTCCATTAATAGTATCTCACAGGGAACCGACACCAACCGCGTCCTGAGCAAGATCACTTTTCTCGCCTCA
GTCTTGGTGCCCCTGAATTTGGTGAGCGGTGTCTTCGGCATGAACGTGGCTGTCCCCTTTGGAAACTCGGGCGGC
CGTCTGGAGCCCTTCTTTGGCATAATTGGATGCATGATTCTCATTTGTTCGCTGATCCTCGGCTGGGCGCGATGG
AAGCGTTACATTTGA
Gene >Hirsu2|6582
ATGGACAAAAATCGGTTCAGCTTCTTTTCGTCCGCCTGGGAATCGACAATTCATGCTGCCGAAATGGGCGACCTC
GTGCTACCGGGCGAAGATATTCGCGGCCTTTTCGAGCTCCCCAAAGACGAGGCAGACGGGGTGTGGTGGTTGAAC
GTTAATTGTGCCTCCAAAGAGGAGGTGCATGGTATCTGCAAAGCCTTTGGCGTCCACCCTCTCACGATTGAGGAT
ATCATTACCCAGGAGGCCCGGGAGAAGATCGAACTGTTTCCTTCCTATTACTTTGCGTGTTTCCGATCCTTCAAC
GTCGTCAAGGAGCCCGACGGAGTCGAGTACGAGCCATTCAACATTTATGTGCTCGTTTTCCGTCAAGGCACGCTT
AGCTTCAGCTTTGCCCCCAACTCGCATGCGTCTCAGGTCCGCAAGCGAATAACGGCACTCAAGGAGTACGTGTCT
TTAAGCAGCGACTGGATCTGCTACGCGCTAATGTAGGTCCCTCGCCTGCCTTCACTTTCGTCGCTCTGACTAACG
GGTAGCCTGCCGTAGCGACAATATCGTGGATTCGTTTGCCCCGGTCATCCGGACGATCGAGCTTGAAGCCGACGC
CATCGAGGATGAGGTGTTTGTCATGAGACAGGACGACTCGAGTTCGTTTCTGCGGTCGATAGGACGAGTTCGCAA
AAACTGCATGGCCCTGCTGAGGTTGCTGGGTGGCAAAGCCGATGTCCTGCGCGGTTTCACGAAGCGGTGCAACGA
GAACTACCAAGTGACGCCACACATGGATATCGGCATGTATCTTGGCGACATTCAAGACCATGTTGTGACCATGGC
AACAAACCTGGGTCACTTTGAGAAGATGCTGTCTCGGGCGCACAGCAACTACCTGGCCACGCTGTCCATTAATAG
TATCTCACAGGGAACCGACACCAACCGCGTCCTGAGCAAGATCACTTTTCTCGCCTCAGTCTTGGTGCCCCTGAA
TTTGGTGAGCGGTGTCTTCGGCATGAACGTGGCTGTCCCCTTTGGAAACTCGGGCGGCCGTCTGGAGCCCTTCTT
TGGCATAATTGGATGCATGATTCTCATTTGTTCGCTGATCCTCGGCTGGGCGCGATGGAAGCGTTACATTTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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