Protein ID | Hirsu2|6581 |
Gene name | |
Location | Contig_341:2122..3910 |
Strand | - |
Gene length (bp) | 1788 |
Transcript length (bp) | 1566 |
Coding sequence length (bp) | 1566 |
Protein length (aa) | 522 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 3.6E-13 | 13 | 83 |
PF01266 | DAO | FAD dependent oxidoreductase | 1.1E-07 | 10 | 50 |
PF00890 | FAD_binding_2 | FAD binding domain | 6.4E-07 | 11 | 49 |
PF12831 | FAD_oxidored | FAD dependent oxidoreductase | 2.7E-06 | 11 | 88 |
PF01593 | Amino_oxidase | Flavin containing amine oxidoreductase | 1.4E-04 | 19 | 63 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016491 | oxidoreductase activity | Yes |
GO:0003674 | molecular_function | No |
GO:0003824 | catalytic activity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 29 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 125 | 147 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6581 MKSPVDKTRHVVIVGGGAAGMSCAATLANHPDKFKVTLLEKSDVVGGQATSIPLNALQFGAAWMNNGVQGGSQIF KHTFNFFRQQGYPPQEVQLQVAFGRGEAGFWTNVFPSKLIQRYAGDIKKFGLFLKVIKWTMPVLGLVPISIMLRL FFFSKDFGDKMVYPLIALFLGTGNQTPHVPSAIVERLFQDPNMKLWDYDPVTLLPNLPTMFTFDHLHAFYCTWRK ALEGKGVSIRTGVEVVNVLSRSAAGVKLRVRDVATGSTTEDDFDEMVMCVLADDALRILGNQATWRERIVLGGAS FYDDITITHSDRQYFERQYETSYKPELCAKPTSDFQKKQIAFAQGDGEGPRDASGFQPMYFTFSYEQDPRLIEMS FNCSNYQHQLKKANARADENLEPVYQTIFLNKDLKHMWTIDDIDEAKIIKKNWWHQLGHRWQHYARVVPGMMFLN GQNRTQFAGSWTLVNMHELACVSGIAAAYRLGADYVRFDDFAQDFFAKFLLLSHGLIFSREEAKRRRSKAT* |
Coding | >Hirsu2|6581 ATGAAGTCTCCGGTCGACAAGACGAGACACGTCGTGATTGTTGGAGGCGGTGCGGCGGGCATGTCCTGCGCCGCG ACCTTGGCCAACCATCCCGACAAGTTCAAAGTCACGCTACTAGAAAAGAGCGACGTGGTTGGAGGACAAGCAACC TCTATACCTCTTAACGCACTGCAGTTCGGCGCTGCATGGATGAACAACGGGGTCCAGGGCGGTTCACAGATCTTT AAGCACACGTTCAACTTCTTCCGCCAGCAAGGCTACCCGCCGCAAGAAGTCCAGCTGCAGGTTGCGTTTGGCAGA GGCGAGGCGGGCTTTTGGACCAACGTCTTCCCGAGTAAGCTCATACAGCGGTACGCCGGTGATATCAAGAAATTT GGCCTTTTTCTCAAAGTGATAAAATGGACCATGCCTGTTCTGGGCCTTGTGCCCATATCTATCATGCTGCGCCTC TTTTTCTTCAGCAAAGACTTTGGCGACAAAATGGTATATCCCCTGATTGCCCTCTTTCTTGGAACCGGCAACCAG ACACCGCACGTCCCTTCAGCTATTGTCGAGCGTCTCTTCCAAGACCCGAATATGAAACTTTGGGACTACGACCCC GTCACCTTACTGCCCAATCTGCCAACAATGTTCACCTTTGATCACCTCCACGCCTTCTACTGCACGTGGAGGAAG GCCCTTGAGGGCAAAGGAGTCTCCATCAGGACTGGCGTCGAAGTGGTCAATGTGCTATCGAGGTCGGCCGCTGGA GTCAAGCTCCGTGTACGGGACGTAGCTACAGGCTCCACGACAGAGGACGACTTTGACGAGATGGTCATGTGCGTG CTGGCCGATGATGCCCTTCGGATTCTCGGCAACCAAGCGACGTGGCGCGAACGGATCGTTCTCGGCGGAGCTTCT TTCTACGACGATATCACCATAACCCACAGCGACAGACAGTACTTCGAGAGACAGTACGAGACGAGTTACAAGCCC GAGCTCTGTGCCAAACCAACTTCTGACTTTCAGAAGAAGCAAATTGCCTTCGCCCAGGGTGATGGAGAGGGGCCG CGGGACGCGAGCGGCTTTCAGCCCATGTATTTCACGTTTTCTTACGAGCAGGACCCGCGACTGATCGAAATGTCC TTCAATTGTAGCAACTACCAGCACCAGCTAAAGAAGGCAAACGCGAGGGCCGACGAAAACTTGGAGCCGGTCTAT CAAACCATTTTCCTCAACAAGGACCTAAAGCATATGTGGACGATCGACGACATCGATGAGGCCAAAATCATCAAG AAAAACTGGTGGCACCAGCTCGGACACCGATGGCAGCATTATGCTCGCGTTGTGCCGGGTATGATGTTTTTGAAT GGGCAAAATCGCACACAGTTTGCTGGGTCATGGACTCTTGTGAATATGCATGAGCTTGCCTGCGTCAGTGGAATC GCTGCTGCATACCGCCTGGGCGCCGATTATGTCCGATTTGATGATTTCGCGCAAGACTTTTTCGCCAAATTTTTG TTACTGTCTCACGGCTTGATCTTCTCCCGCGAAGAGGCGAAGAGGCGGCGATCCAAGGCGACATAG |
Transcript | >Hirsu2|6581 ATGAAGTCTCCGGTCGACAAGACGAGACACGTCGTGATTGTTGGAGGCGGTGCGGCGGGCATGTCCTGCGCCGCG ACCTTGGCCAACCATCCCGACAAGTTCAAAGTCACGCTACTAGAAAAGAGCGACGTGGTTGGAGGACAAGCAACC TCTATACCTCTTAACGCACTGCAGTTCGGCGCTGCATGGATGAACAACGGGGTCCAGGGCGGTTCACAGATCTTT AAGCACACGTTCAACTTCTTCCGCCAGCAAGGCTACCCGCCGCAAGAAGTCCAGCTGCAGGTTGCGTTTGGCAGA GGCGAGGCGGGCTTTTGGACCAACGTCTTCCCGAGTAAGCTCATACAGCGGTACGCCGGTGATATCAAGAAATTT GGCCTTTTTCTCAAAGTGATAAAATGGACCATGCCTGTTCTGGGCCTTGTGCCCATATCTATCATGCTGCGCCTC TTTTTCTTCAGCAAAGACTTTGGCGACAAAATGGTATATCCCCTGATTGCCCTCTTTCTTGGAACCGGCAACCAG ACACCGCACGTCCCTTCAGCTATTGTCGAGCGTCTCTTCCAAGACCCGAATATGAAACTTTGGGACTACGACCCC GTCACCTTACTGCCCAATCTGCCAACAATGTTCACCTTTGATCACCTCCACGCCTTCTACTGCACGTGGAGGAAG GCCCTTGAGGGCAAAGGAGTCTCCATCAGGACTGGCGTCGAAGTGGTCAATGTGCTATCGAGGTCGGCCGCTGGA GTCAAGCTCCGTGTACGGGACGTAGCTACAGGCTCCACGACAGAGGACGACTTTGACGAGATGGTCATGTGCGTG CTGGCCGATGATGCCCTTCGGATTCTCGGCAACCAAGCGACGTGGCGCGAACGGATCGTTCTCGGCGGAGCTTCT TTCTACGACGATATCACCATAACCCACAGCGACAGACAGTACTTCGAGAGACAGTACGAGACGAGTTACAAGCCC GAGCTCTGTGCCAAACCAACTTCTGACTTTCAGAAGAAGCAAATTGCCTTCGCCCAGGGTGATGGAGAGGGGCCG CGGGACGCGAGCGGCTTTCAGCCCATGTATTTCACGTTTTCTTACGAGCAGGACCCGCGACTGATCGAAATGTCC TTCAATTGTAGCAACTACCAGCACCAGCTAAAGAAGGCAAACGCGAGGGCCGACGAAAACTTGGAGCCGGTCTAT CAAACCATTTTCCTCAACAAGGACCTAAAGCATATGTGGACGATCGACGACATCGATGAGGCCAAAATCATCAAG AAAAACTGGTGGCACCAGCTCGGACACCGATGGCAGCATTATGCTCGCGTTGTGCCGGGTATGATGTTTTTGAAT GGGCAAAATCGCACACAGTTTGCTGGGTCATGGACTCTTGTGAATATGCATGAGCTTGCCTGCGTCAGTGGAATC GCTGCTGCATACCGCCTGGGCGCCGATTATGTCCGATTTGATGATTTCGCGCAAGACTTTTTCGCCAAATTTTTG TTACTGTCTCACGGCTTGATCTTCTCCCGCGAAGAGGCGAAGAGGCGGCGATCCAAGGCGACATAG |
Gene | >Hirsu2|6581 ATGAAGTCTCCGGTCGACAAGACGAGACACGTCGTGATTGTTGGAGGCGGTGCGGCGGGCATGGTAACAACATAC AATGAACCTTGGTTCTTCCCCAAAAAGGACGTCCCTCGACTGACCCATTTCCCCAGTCCTGCGCCGCGACCTTGG CCAACCATCCCGACAAGTTCAAAGTCACGCTACTAGAAAAGAGCGACGTGGTTGGAGGACAAGCAACCTCTATAC CTCTTAACGCACTGCAGTTCGGCGCTGCATGGATGAACAACGGGGTCCAGGGCGGTTCACAGGTCCGCCGTTCAG ATCTCGAGCGCCGTAATCAGCTCATGTTCGACTGACAAGAGGAGAGCAGATCTTTAAGCACACGTTCAACTTCTT CCGCCAGCAAGGCTACCCGCCGCAAGAAGTCCAGCTGCAGGTTGCGTTTGGCAGAGGCGAGGCGGGCTTTTGGAC CAACGTCTTCCCGAGTAAGCTCATACAGCGGTACGCCGGTGATATCAAGAAATTTGGCCTTTTTCTCAAAGTGAT AAAATGGACCATGCCTGTTCTGGGCCTTGTGCCCATATCTATCATGCTGCGCCTCTTTTTCTTCAGCAAAGACTT TGGCGACAAAATGGTATATCCCCTGATTGCCCTCTTTCTTGGAACCGGCAACCAGACACCGCACGTCCCTTCAGC TATTGTCGAGCGTCTCTTCCAAGACCCGAATATGAAACTTTGGGACTACGACCCCGTCACCTTACTGCCCAATCT GCCAACAATGTTCACCTTTGATCACCTCCACGCCTTCTACTGCACGTGGAGGAAGGCCCTTGAGGGCAAAGGAGT CTCCATCAGGACTGGCGTCGAAGTGGTCAATGTGCTATCGAGGTCGGCCGCTGGAGTCAAGCTCCGTGTACGGGA CGTAGCTACAGGCTCCACGACAGAGGACGACTTTGACGAGATGGTCATGTGCGTGCTGGCCGATGATGCCCTTCG GATTCTCGGCAACCAAGCGACGTGGCGCGAACGGATCGTTCTCGGCGGAGCTTCTTTCTACGACGATATCACCAT AACCCACAGCGACAGACAGTACTTCGAGAGACAGTACGAGACGAGTTACAAGCCCGAGCTCTGTGCCAAACCAAC TTCTGACTTTCAGAAGAAGCAAATTGCCTTCGCCCAGGGTGATGGAGAGGGGCCGCGGGACGCGAGCGGCTTTCA GCCCATGTATTTCACGTTTTCTTACGAGCAGGACCCGCGACTGATCGAAATGTCCTTCAATTGTAGCAACTACCA GCACCAGCTAAAGAAGGCAAACGCGAGGGCCGACGAAAACTTGGAGCCGGTCTATCAAACCATTTTCCTCAACAA GGACCTAAAGCATATGTGGACGATCGACGACATCGATGAGGCCAAAATCATCAAGAAAAACTGGTGGCACCAGCT CGGACACCGATGGCAGCATTATGCTCGCGTTGTGCCGGGTATGATGTTTTTGAATGGGCAAAATCGCACACAGTT TGCTGGGTCATGGACTCTTGTGGTAAGCATCACTCGCCTCGTCCTCGACCATCTCCCGACTTCTAGTACTTTAGT CTTGTCAGGGTTGAGATCTAATTCAACTGTTCTTTTTAGAATATGCATGAGCTTGCCTGCGTCAGTGGAATCGCT GCTGCATACCGCCTGGGCGCCGATTATGTCCGATTTGATGATTTCGCGCAAGACTTTTTCGCCAAATTTTTGTTA CTGTCTCACGGCTTGATCTTCTCCCGCGAAGAGGCGAAGAGGCGGCGATCCAAGGCGACATAG |