Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6580
Gene name
LocationContig_341:449..1553
Strand+
Gene length (bp)1104
Transcript length (bp)1104
Coding sequence length (bp)1104
Protein length (aa) 368

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF15365 PNRC Proline-rich nuclear receptor coactivator motif 2.5E-08 108 127

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6580
MSDIPPLVKSTPVRRRPGRVGGRLGAQKAYASENDAAALLRGPQTPKKTTSGSPVPPDSSSSRLGSKQRSRNRTK
PKNAPSSPDSLQRGRQTPPHRSVSLKPSTSTAFAGATFHASPAPSALPIPSFLAKSSSDTPVHKGARDMVQEPSP
PATDIDAPTPLRPSSVPKSHESPLDFMFRAHRAERERRDRGEHTEQGNCSIATSPPPPSHPNSCQSPSLLNISQT
RRSHQKSSSSRLDVPEPDHNTVLPMGPAFSTPYQERIRALYSNGPQSNPIQVRDESSCKASDDPAEALKKFLFGG
NSGQTPLSGKAPTASATAGQNSTNTTHTPQMRMSGPGTSNVSRPNDIQAMENDLRRILKLDLSSKTS*
Coding >Hirsu2|6580
ATGAGTGACATTCCTCCGCTGGTGAAGTCGACGCCCGTACGCCGAAGGCCAGGGCGTGTCGGCGGCCGACTGGGT
GCCCAAAAGGCCTATGCATCTGAAAATGATGCTGCTGCGCTTCTGAGGGGTCCGCAAACACCGAAGAAGACGACC
TCGGGGTCGCCTGTACCGCCCGATTCCAGCTCTTCCAGACTGGGCTCCAAGCAGCGAAGCAGGAATCGGACAAAG
CCCAAGAATGCACCCTCGTCTCCCGACTCATTGCAGCGCGGCCGTCAGACCCCACCCCATCGCTCTGTGTCGCTC
AAGCCCTCGACCAGTACAGCTTTCGCAGGGGCGACGTTTCATGCCTCTCCCGCTCCATCAGCCTTACCGATTCCG
AGTTTTTTGGCCAAGTCTTCGAGCGACACACCCGTCCACAAGGGTGCAAGGGACATGGTCCAGGAACCTTCCCCC
CCTGCTACCGATATCGACGCACCTACCCCCCTTCGACCCTCCTCCGTCCCCAAGTCTCACGAGTCTCCTCTTGAC
TTTATGTTTCGCGCGCACCGGGCAGAAAGAGAGAGACGGGATCGTGGTGAGCACACCGAGCAAGGCAATTGCTCG
ATCGCCACCTCTCCACCGCCGCCGTCGCACCCCAATTCTTGCCAATCTCCTAGCCTCCTCAACATCTCTCAGACC
CGACGTTCACACCAGAAGTCATCTTCGAGCCGTCTAGACGTCCCTGAGCCCGATCACAACACAGTGCTTCCAATG
GGCCCAGCCTTCTCCACCCCATATCAGGAAAGGATAAGAGCGCTGTACTCGAATGGACCTCAGTCAAACCCCATC
CAAGTCCGAGACGAATCATCATGCAAAGCATCAGACGATCCGGCCGAGGCTCTCAAAAAATTTCTTTTCGGCGGA
AACTCCGGTCAAACGCCCCTCTCCGGCAAAGCACCGACTGCCTCTGCTACGGCCGGCCAGAATAGTACAAACACC
ACTCATACACCACAAATGAGGATGAGCGGACCTGGTACTTCGAATGTATCGCGTCCTAATGATATTCAAGCCATG
GAGAATGACCTTCGACGGATCTTGAAGCTGGATCTGAGCTCAAAGACTTCGTAG
Transcript >Hirsu2|6580
ATGAGTGACATTCCTCCGCTGGTGAAGTCGACGCCCGTACGCCGAAGGCCAGGGCGTGTCGGCGGCCGACTGGGT
GCCCAAAAGGCCTATGCATCTGAAAATGATGCTGCTGCGCTTCTGAGGGGTCCGCAAACACCGAAGAAGACGACC
TCGGGGTCGCCTGTACCGCCCGATTCCAGCTCTTCCAGACTGGGCTCCAAGCAGCGAAGCAGGAATCGGACAAAG
CCCAAGAATGCACCCTCGTCTCCCGACTCATTGCAGCGCGGCCGTCAGACCCCACCCCATCGCTCTGTGTCGCTC
AAGCCCTCGACCAGTACAGCTTTCGCAGGGGCGACGTTTCATGCCTCTCCCGCTCCATCAGCCTTACCGATTCCG
AGTTTTTTGGCCAAGTCTTCGAGCGACACACCCGTCCACAAGGGTGCAAGGGACATGGTCCAGGAACCTTCCCCC
CCTGCTACCGATATCGACGCACCTACCCCCCTTCGACCCTCCTCCGTCCCCAAGTCTCACGAGTCTCCTCTTGAC
TTTATGTTTCGCGCGCACCGGGCAGAAAGAGAGAGACGGGATCGTGGTGAGCACACCGAGCAAGGCAATTGCTCG
ATCGCCACCTCTCCACCGCCGCCGTCGCACCCCAATTCTTGCCAATCTCCTAGCCTCCTCAACATCTCTCAGACC
CGACGTTCACACCAGAAGTCATCTTCGAGCCGTCTAGACGTCCCTGAGCCCGATCACAACACAGTGCTTCCAATG
GGCCCAGCCTTCTCCACCCCATATCAGGAAAGGATAAGAGCGCTGTACTCGAATGGACCTCAGTCAAACCCCATC
CAAGTCCGAGACGAATCATCATGCAAAGCATCAGACGATCCGGCCGAGGCTCTCAAAAAATTTCTTTTCGGCGGA
AACTCCGGTCAAACGCCCCTCTCCGGCAAAGCACCGACTGCCTCTGCTACGGCCGGCCAGAATAGTACAAACACC
ACTCATACACCACAAATGAGGATGAGCGGACCTGGTACTTCGAATGTATCGCGTCCTAATGATATTCAAGCCATG
GAGAATGACCTTCGACGGATCTTGAAGCTGGATCTGAGCTCAAAGACTTCGTAG
Gene >Hirsu2|6580
ATGAGTGACATTCCTCCGCTGGTGAAGTCGACGCCCGTACGCCGAAGGCCAGGGCGTGTCGGCGGCCGACTGGGT
GCCCAAAAGGCCTATGCATCTGAAAATGATGCTGCTGCGCTTCTGAGGGGTCCGCAAACACCGAAGAAGACGACC
TCGGGGTCGCCTGTACCGCCCGATTCCAGCTCTTCCAGACTGGGCTCCAAGCAGCGAAGCAGGAATCGGACAAAG
CCCAAGAATGCACCCTCGTCTCCCGACTCATTGCAGCGCGGCCGTCAGACCCCACCCCATCGCTCTGTGTCGCTC
AAGCCCTCGACCAGTACAGCTTTCGCAGGGGCGACGTTTCATGCCTCTCCCGCTCCATCAGCCTTACCGATTCCG
AGTTTTTTGGCCAAGTCTTCGAGCGACACACCCGTCCACAAGGGTGCAAGGGACATGGTCCAGGAACCTTCCCCC
CCTGCTACCGATATCGACGCACCTACCCCCCTTCGACCCTCCTCCGTCCCCAAGTCTCACGAGTCTCCTCTTGAC
TTTATGTTTCGCGCGCACCGGGCAGAAAGAGAGAGACGGGATCGTGGTGAGCACACCGAGCAAGGCAATTGCTCG
ATCGCCACCTCTCCACCGCCGCCGTCGCACCCCAATTCTTGCCAATCTCCTAGCCTCCTCAACATCTCTCAGACC
CGACGTTCACACCAGAAGTCATCTTCGAGCCGTCTAGACGTCCCTGAGCCCGATCACAACACAGTGCTTCCAATG
GGCCCAGCCTTCTCCACCCCATATCAGGAAAGGATAAGAGCGCTGTACTCGAATGGACCTCAGTCAAACCCCATC
CAAGTCCGAGACGAATCATCATGCAAAGCATCAGACGATCCGGCCGAGGCTCTCAAAAAATTTCTTTTCGGCGGA
AACTCCGGTCAAACGCCCCTCTCCGGCAAAGCACCGACTGCCTCTGCTACGGCCGGCCAGAATAGTACAAACACC
ACTCATACACCACAAATGAGGATGAGCGGACCTGGTACTTCGAATGTATCGCGTCCTAATGATATTCAAGCCATG
GAGAATGACCTTCGACGGATCTTGAAGCTGGATCTGAGCTCAAAGACTTCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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