Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6572
Gene name
LocationContig_34:53234..55175
Strand-
Gene length (bp)1941
Transcript length (bp)1707
Coding sequence length (bp)1707
Protein length (aa) 569

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 8.0E-36 77 445

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 18 490 9.0E-68
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 59 511 7.0E-60
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 28 499 1.0E-59
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 57 500 1.0E-56
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 34 457 1.0E-48
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Swissprot ID Swissprot Description Start End E-value
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 18 490 9.0E-68
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 59 511 7.0E-60
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 28 499 1.0E-59
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 57 500 1.0E-56
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 34 457 1.0E-48
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 47 508 1.0E-41
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 56 517 8.0E-39
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 50 511 7.0E-37
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 54 497 2.0E-34
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 50 492 2.0E-32
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 56 511 7.0E-32
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 56 566 9.0E-32
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 56 566 2.0E-27
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 49 566 2.0E-22
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 55 283 8.0E-14
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 61 537 2.0E-13
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 56 282 6.0E-13
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 60 475 2.0E-12
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 27 465 3.0E-11
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 80 496 7.0E-11
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 64 284 4.0E-10
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 55 496 5.0E-09
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 47 442 8.0E-09
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 48 354 7.0E-07
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0006810 transport No
GO:0051179 localization No
GO:0051234 establishment of localization No
GO:0044425 membrane part No
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.45

Transmembrane Domains

Domain # Start End Length
1 71 93 22
2 163 185 22
3 198 220 22
4 230 252 22
5 301 323 22
6 336 358 22
7 363 385 22
8 395 417 22
9 429 448 19
10 463 485 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6572
MPASGANKLDVAHDELQGRAAPAPASDDTAAAASRQQNGQGDGLGLVGSDGGPVTLTEEDNRRICRKTDRVILAI
LVWVYFLQILDKSVLGYGATYGLKTDTGLTGNQYSLVGSIAPIAQLAWQPFSSFLIVKVPHRILMPALVLGWGVA
QTAMAACHNFSGLMAARFFLGLFEAGCLPLFGIITSQWYRRAEQPLRIAAWYSTNGAATIFAAALSYGLGQIHSS
VLKSWQIIFLFVGLVTVISSPFVYWKLDNDIPSARFLTEEEKPQALERLRANQTGVGSRDFKWKHVSEAAMEPKT
YLWIAMTLLLNVGASVTNTFGPLILNGLVPNDHEHAILLNMPFGALQVVVILLASYLAQKARLKGAVLAGFMLPV
VAGLAVLHSVRRDSSSQAPLLVGYYLLAFLFGGNPLIVTWIVGNTAGTTKKSVIMSVYNAASSAGNIIGPLLFND
HDAPAYRPGLRACLGIFAGLVGVVLMQWADLVFLNRMQERRRVQNGKPAKIVDHSMDDRFHGGAGTDDDEAVAAG
ANDAAVVKDSSSAAGAAGADGRPGEQAFLDMTDRENDEFIYIY*
Coding >Hirsu2|6572
ATGCCGGCTAGCGGCGCCAACAAGCTGGACGTCGCCCACGATGAACTCCAGGGCCGGGCGGCGCCGGCGCCGGCG
AGCGACGACACCGCGGCGGCCGCATCACGGCAGCAGAACGGGCAGGGCGACGGGCTCGGCCTCGTCGGCTCCGAC
GGCGGCCCCGTCACGCTGACGGAGGAGGACAACCGGCGCATCTGCCGCAAGACGGACCGCGTCATCCTCGCCATC
CTCGTCTGGGTCTACTTCCTGCAGATCCTCGACAAGTCGGTGCTCGGCTACGGCGCGACCTACGGCCTCAAGACC
GACACCGGCCTGACCGGCAACCAGTACTCGCTGGTCGGGTCCATCGCGCCCATCGCCCAGCTGGCCTGGCAGCCC
TTCTCGTCCTTCCTGATCGTCAAGGTGCCGCACCGGATCCTGATGCCGGCCCTGGTCCTGGGCTGGGGCGTGGCC
CAGACGGCCATGGCCGCCTGCCACAACTTCTCCGGCCTCATGGCCGCCCGCTTCTTCCTCGGCCTGTTCGAGGCC
GGCTGCCTGCCGCTCTTCGGCATCATCACCAGCCAGTGGTACCGCCGCGCCGAGCAGCCGCTGCGCATCGCCGCC
TGGTACAGCACCAACGGCGCCGCCACCATCTTCGCCGCCGCTCTGTCGTACGGCCTGGGCCAGATTCACTCCTCC
GTCCTCAAGTCGTGGCAGATAATCTTCCTCTTCGTCGGCCTCGTCACCGTCATCTCGAGCCCCTTCGTCTACTGG
AAGCTCGACAACGACATCCCCTCGGCCCGCTTCCTGACGGAGGAGGAGAAGCCGCAGGCGCTCGAGCGGCTGCGC
GCCAACCAGACCGGCGTCGGCAGCCGCGATTTCAAGTGGAAGCACGTGTCGGAGGCAGCCATGGAGCCCAAGACG
TACCTCTGGATCGCCATGACGCTGCTGCTCAACGTCGGCGCCAGCGTCACCAACACCTTCGGCCCGCTCATCCTC
AACGGCCTCGTGCCCAACGACCACGAGCACGCGATCCTGCTCAACATGCCCTTCGGCGCCCTGCAGGTCGTCGTC
ATCCTGCTGGCCAGCTACCTGGCCCAGAAGGCCCGGCTCAAGGGCGCCGTCCTGGCCGGCTTCATGCTGCCCGTC
GTCGCCGGCCTGGCCGTCCTGCACTCGGTCCGCCGCGACTCGTCGTCCCAGGCGCCGCTGCTCGTCGGCTACTAC
CTGCTGGCCTTCCTCTTCGGCGGCAACCCGCTCATCGTCACCTGGATCGTCGGCAACACCGCCGGCACCACCAAG
AAGTCGGTCATCATGAGCGTCTACAACGCCGCCAGCTCGGCCGGCAACATCATCGGCCCGCTGCTCTTCAACGAC
CACGACGCGCCCGCCTACCGCCCCGGCCTGCGCGCCTGCCTCGGCATCTTCGCCGGCCTCGTCGGCGTCGTCCTC
ATGCAGTGGGCCGACCTCGTCTTCCTCAACCGCATGCAGGAGAGGCGCCGTGTCCAGAACGGCAAGCCGGCCAAG
ATCGTCGACCACTCCATGGACGACCGCTTCCATGGCGGCGCCGGCACCGACGACGACGAGGCCGTCGCCGCCGGC
GCCAACGACGCCGCCGTCGTCAAGGACAGCTCCAGCGCCGCCGGCGCGGCGGGGGCAGATGGCCGGCCGGGAGAG
CAGGCCTTCCTGGACATGACGGACCGGGAGAACGACGAGTTCATTTACATTTACTAG
Transcript >Hirsu2|6572
ATGCCGGCTAGCGGCGCCAACAAGCTGGACGTCGCCCACGATGAACTCCAGGGCCGGGCGGCGCCGGCGCCGGCG
AGCGACGACACCGCGGCGGCCGCATCACGGCAGCAGAACGGGCAGGGCGACGGGCTCGGCCTCGTCGGCTCCGAC
GGCGGCCCCGTCACGCTGACGGAGGAGGACAACCGGCGCATCTGCCGCAAGACGGACCGCGTCATCCTCGCCATC
CTCGTCTGGGTCTACTTCCTGCAGATCCTCGACAAGTCGGTGCTCGGCTACGGCGCGACCTACGGCCTCAAGACC
GACACCGGCCTGACCGGCAACCAGTACTCGCTGGTCGGGTCCATCGCGCCCATCGCCCAGCTGGCCTGGCAGCCC
TTCTCGTCCTTCCTGATCGTCAAGGTGCCGCACCGGATCCTGATGCCGGCCCTGGTCCTGGGCTGGGGCGTGGCC
CAGACGGCCATGGCCGCCTGCCACAACTTCTCCGGCCTCATGGCCGCCCGCTTCTTCCTCGGCCTGTTCGAGGCC
GGCTGCCTGCCGCTCTTCGGCATCATCACCAGCCAGTGGTACCGCCGCGCCGAGCAGCCGCTGCGCATCGCCGCC
TGGTACAGCACCAACGGCGCCGCCACCATCTTCGCCGCCGCTCTGTCGTACGGCCTGGGCCAGATTCACTCCTCC
GTCCTCAAGTCGTGGCAGATAATCTTCCTCTTCGTCGGCCTCGTCACCGTCATCTCGAGCCCCTTCGTCTACTGG
AAGCTCGACAACGACATCCCCTCGGCCCGCTTCCTGACGGAGGAGGAGAAGCCGCAGGCGCTCGAGCGGCTGCGC
GCCAACCAGACCGGCGTCGGCAGCCGCGATTTCAAGTGGAAGCACGTGTCGGAGGCAGCCATGGAGCCCAAGACG
TACCTCTGGATCGCCATGACGCTGCTGCTCAACGTCGGCGCCAGCGTCACCAACACCTTCGGCCCGCTCATCCTC
AACGGCCTCGTGCCCAACGACCACGAGCACGCGATCCTGCTCAACATGCCCTTCGGCGCCCTGCAGGTCGTCGTC
ATCCTGCTGGCCAGCTACCTGGCCCAGAAGGCCCGGCTCAAGGGCGCCGTCCTGGCCGGCTTCATGCTGCCCGTC
GTCGCCGGCCTGGCCGTCCTGCACTCGGTCCGCCGCGACTCGTCGTCCCAGGCGCCGCTGCTCGTCGGCTACTAC
CTGCTGGCCTTCCTCTTCGGCGGCAACCCGCTCATCGTCACCTGGATCGTCGGCAACACCGCCGGCACCACCAAG
AAGTCGGTCATCATGAGCGTCTACAACGCCGCCAGCTCGGCCGGCAACATCATCGGCCCGCTGCTCTTCAACGAC
CACGACGCGCCCGCCTACCGCCCCGGCCTGCGCGCCTGCCTCGGCATCTTCGCCGGCCTCGTCGGCGTCGTCCTC
ATGCAGTGGGCCGACCTCGTCTTCCTCAACCGCATGCAGGAGAGGCGCCGTGTCCAGAACGGCAAGCCGGCCAAG
ATCGTCGACCACTCCATGGACGACCGCTTCCATGGCGGCGCCGGCACCGACGACGACGAGGCCGTCGCCGCCGGC
GCCAACGACGCCGCCGTCGTCAAGGACAGCTCCAGCGCCGCCGGCGCGGCGGGGGCAGATGGCCGGCCGGGAGAG
CAGGCCTTCCTGGACATGACGGACCGGGAGAACGACGAGTTCATTTACATTTACTAG
Gene >Hirsu2|6572
ATGCCGGCTAGCGGCGCCAACAAGCTGGACGTCGCCCACGATGAACTCCAGGGCCGGGCGGCGCCGGCGCCGGCG
AGCGACGACACCGCGGCGGCCGCATCACGGCAGCAGAACGGGCAGGGCGACGGGCTCGGCCTCGTCGGCTCCGAC
GGCGGCCCCGTCACGCTGACGGAGGAGGACAACCGGCGCATCTGCCGCAAGACGGACCGCGTCATCCTCGCCATC
CTCGTCTGGGTCTACTTCCTGCAGATCCTCGACAAGTCGGTGCTCGGCTACGGCGCGACCTACGGCCTCAAGACC
GACACCGGCCTGACCGGCAACCAGTACTCGCTGGTCGGGTCCATCGCGCCCATCGCCCAGCTGGCCTGGCAGCCC
TTCTCGTCCTTCCTGATCGTCAAGGTGCCGCACCGGATCCTGATGCCGGCCCTGGTCCTGGGCTGGGGCGTGGCC
CAGACGGCCATGGCCGCCTGCCACAACTTCTCCGGCCTCATGGCCGCCCGCTTCTTCCTCGGCCTGTTCGAGGCC
GGCTGCCTGCCGCTCTTCGGCATCATCACCAGCCAGTGGTACCGCCGCGCCGAGCAGCCGCTGCGCATCGCCGCC
TGGTACAGCACCAACGGCGCCGCCACCATCTTCGCCGCCGCTCTGTCGTACGGCCTGGGCCAGATTCACTCCTCC
GTCCTCAAGTCGTGGCAGATGTACGTTCTATCTCTTTCTGTCTCTCTCTCTTCTCCTCTCTCCTGTCCTCTCTCC
TTCCCCCCTTCCCCTTTCGCAATGTATATTCTTGGAAGGAGAACAAAACACAGCTGCGAACTTGGGCGGGCGGAA
GAGGGTTTGTTGTTGCTGTGGTTGTCGTTGTTGTTGTTGTCGTCGTTGTTGTCGTCGTTGCCGTTACTATTGTCG
ATCAACAGTTGACAGAAACCTCGGGCCAGAATCTTCCTCTTCGTCGGCCTCGTCACCGTCATCTCGAGCCCCTTC
GTCTACTGGAAGCTCGACAACGACATCCCCTCGGCCCGCTTCCTGACGGAGGAGGAGAAGCCGCAGGCGCTCGAG
CGGCTGCGCGCCAACCAGACCGGCGTCGGCAGCCGCGATTTCAAGTGGAAGCACGTGTCGGAGGCAGCCATGGAG
CCCAAGACGTACCTCTGGATCGCCATGACGCTGCTGCTCAACGTCGGCGCCAGCGTCACCAACACCTTCGGCCCG
CTCATCCTCAACGGCCTCGTGCCCAACGACCACGAGCACGCGATCCTGCTCAACATGCCCTTCGGCGCCCTGCAG
GTCGTCGTCATCCTGCTGGCCAGCTACCTGGCCCAGAAGGCCCGGCTCAAGGGCGCCGTCCTGGCCGGCTTCATG
CTGCCCGTCGTCGCCGGCCTGGCCGTCCTGCACTCGGTCCGCCGCGACTCGTCGTCCCAGGCGCCGCTGCTCGTC
GGCTACTACCTGCTGGCCTTCCTCTTCGGCGGCAACCCGCTCATCGTCACCTGGATCGTCGGCAACACCGCCGGC
ACCACCAAGAAGTCGGTCATCATGAGCGTCTACAACGCCGCCAGCTCGGCCGGCAACATCATCGGCCCGCTGCTC
TTCAACGACCACGACGCGCCCGCCTACCGCCCCGGCCTGCGCGCCTGCCTCGGCATCTTCGCCGGCCTCGTCGGC
GTCGTCCTCATGCAGTGGGCCGACCTCGTCTTCCTCAACCGCATGCAGGAGAGGCGCCGTGTCCAGAACGGCAAG
CCGGCCAAGATCGTCGACCACTCCATGGACGACCGCTTCCATGGCGGCGCCGGCACCGACGACGACGAGGCCGTC
GCCGCCGGCGCCAACGACGCCGCCGTCGTCAAGGACAGCTCCAGCGCCGCCGGCGCGGCGGGGGCAGATGGCCGG
CCGGGAGAGCAGGCCTTCCTGGACATGACGGACCGGGAGAACGACGAGTTCATTTACATTTACTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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