Protein ID | Hirsu2|6560 |
Gene name | |
Location | Contig_34:20793..24106 |
Strand | - |
Gene length (bp) | 3313 |
Transcript length (bp) | 3252 |
Coding sequence length (bp) | 3252 |
Protein length (aa) | 1084 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11915 | DUF3433 | Protein of unknown function (DUF3433) | 8.6E-15 | 547 | 633 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 18 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 376 | 398 | 22 |
2 | 503 | 520 | 17 |
3 | 548 | 565 | 17 |
4 | 610 | 632 | 22 |
5 | 963 | 985 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6560 MALILAPLQSFIMSVGPVIRTKSVDVIARAHIAPLSRQVEMMESDQFLTRAYNSAFLKQQFPRFMTPDYALRPFY VAPDSEQTSNTKLTATTTKFSTELTCRPGQVPEKEKQEWCHRAQAWMIFKISDGLGCEARIKTWKPYEDAELRYV GYTDYGFPNAPIEMSDPQYSDLDHTPYLSPSTCGNHTNQFAVVWTAPTERPVSCETSPKHNFTVIYCQAQYFKQE MRATVSAEDFRPLDSSLQPVSDRKPLSRAEFNATAFEAKLANGYKANPDGYASEDWLTPTAGRPRDRELGPSPNL KVDYDVQSMSLMSHFMLRGQYSNFSDPADLQQELARAYRHLFSMAIHSTLINGTNSDGGAAALSTTSLSGIVVSR VFSAIVESLLASIAVLAFTLVGLCRKADSHLGSNPNSISRLCGLDYDDEVVETFHALDYTNQKRIRHVVGNDVFR LSRHGNHDNQSYYIERIAVCNTKDIPSALAGRTCSGSQQGGDMRPFAITRRAGGLLLFILTCSLAVILWLKRLEA TSSQGGLPRPSDNPLVSKVLEKYIPTLFATLLEAFWVLLNRHHCTLQPFQELCSGRAWPSRTIAITYSSIPPPLA LWRSLSARHFNLTALCIIALSGNFLGIGLGALFNEIEWPVKYPEILQPQMPASPPESSSLRQHDWLHMYANLTSD TPLPPWVTANYFFQPYLIPQSGPSDIYILSTRGFGTNISCTPVPRFSIRPQNGTSASWCSNPTRYLADVSGAGSS LGGKDANRSIEKVFRGDYPDLNNFQLDPCLSQFIVTWGRAVPGDESVSEASAVRCRFTPEIAMFDVAVDVGGLVH GYNRTTDFQSALAHDLDFRNHSMRLWAALSRVSERLEPGGLSSKDNTRAMGSMHNDSLRHDGITTLISARTGSKE FFTPGTPPPDPVQLLPAVQDTFRLYFAYDTAINYFVLSDPSSYQSTTGFKLITERRLFLDNGAFMIAVVVLSIDI LFAVILLAWPWSVVRVLPRMPTDLASTLAYIMPSRLMDTSDAVDMSDRTLSLGKYMGRDGKEHFGIELDPYVKLV EPEKSSLSMGSLKKRKLHIWRRRPKDVGSQGRV* |
Coding | >Hirsu2|6560 ATGGCTCTGATCCTGGCGCCGCTCCAGTCCTTTATTATGAGCGTTGGCCCGGTCATCAGAACAAAGTCGGTTGAT GTCATCGCCAGGGCCCATATCGCTCCATTGAGCCGGCAAGTAGAGATGATGGAATCGGATCAATTTCTGACGAGG GCATATAATTCGGCCTTTCTCAAACAGCAATTTCCACGATTTATGACCCCAGACTATGCTCTTCGTCCTTTCTAC GTCGCGCCAGACTCCGAACAGACGAGCAATACAAAATTGACCGCTACAACGACAAAATTCTCGACGGAACTGACC TGTCGGCCCGGGCAGGTACCAGAGAAGGAGAAACAAGAATGGTGTCATCGCGCACAAGCATGGATGATATTCAAA ATCTCGGATGGCCTAGGTTGCGAGGCCAGGATAAAAACCTGGAAGCCGTACGAAGATGCTGAATTGCGATACGTT GGATACACCGACTATGGCTTTCCAAACGCCCCCATAGAGATGAGCGACCCCCAGTACTCGGACCTCGATCATACG CCGTACCTCAGTCCCAGTACATGCGGCAACCATACCAACCAGTTTGCGGTCGTATGGACAGCGCCCACCGAAAGG CCCGTTTCTTGCGAGACGAGCCCAAAGCACAACTTTACCGTCATCTACTGCCAGGCGCAGTACTTCAAACAAGAA ATGAGGGCGACGGTGAGCGCCGAGGATTTCAGGCCTCTGGACAGTTCCCTCCAGCCGGTATCCGACAGAAAGCCG CTGAGCAGGGCCGAGTTCAATGCGACCGCTTTCGAGGCAAAGCTTGCGAATGGGTATAAAGCAAACCCAGACGGC TACGCATCCGAGGATTGGTTGACGCCGACGGCCGGGCGGCCCCGAGACCGAGAGCTTGGACCCTCACCCAACTTG AAGGTGGACTACGACGTTCAGAGCATGTCACTGATGTCCCATTTCATGCTGAGAGGGCAGTATTCGAATTTCTCG GACCCGGCAGATCTCCAACAAGAGTTGGCGAGAGCGTATCGGCACCTTTTCTCCATGGCCATCCACAGCACGCTC ATCAACGGAACGAACTCTGACGGCGGGGCGGCCGCCTTGTCAACGACCTCTTTATCTGGAATTGTCGTCAGCAGG GTCTTTTCCGCGATAGTCGAAAGCCTGCTTGCTTCTATTGCTGTCCTCGCTTTCACGCTCGTTGGTCTCTGTCGA AAAGCTGATAGCCATCTTGGCTCAAACCCAAACTCAATCTCGCGCCTTTGCGGCCTCGACTATGATGACGAGGTG GTTGAAACGTTCCATGCCCTGGATTATACTAATCAGAAGCGTATTCGTCACGTCGTGGGAAACGATGTGTTCCGG CTCTCTCGTCATGGCAACCATGATAACCAGAGCTATTACATCGAGAGGATCGCTGTTTGTAACACGAAAGATATA CCTTCAGCCTTGGCTGGAAGGACTTGCAGCGGAAGTCAGCAAGGTGGCGATATGCGCCCATTTGCAATAACTCGC CGAGCCGGAGGCTTGCTCCTATTCATTCTAACGTGCTCACTCGCGGTCATTCTTTGGCTCAAAAGACTGGAGGCT ACAAGTAGCCAGGGCGGACTGCCCCGTCCATCCGATAACCCTCTCGTTTCCAAGGTGCTGGAGAAGTACATCCCG ACTCTATTTGCGACTCTGCTGGAGGCATTCTGGGTACTGCTTAATCGGCATCACTGCACACTACAACCTTTCCAG GAGTTGTGCTCCGGCAGAGCATGGCCAAGCAGGACGATAGCGATCACATACTCGTCTATCCCCCCTCCGCTGGCC CTCTGGAGATCTCTCAGCGCTCGTCATTTCAATCTCACGGCGCTCTGTATTATTGCTCTTTCCGGCAATTTTCTC GGCATTGGTCTCGGGGCTCTGTTCAACGAGATCGAGTGGCCGGTGAAGTATCCCGAAATCTTGCAGCCGCAAATG CCTGCAAGCCCCCCCGAATCGTCTAGCTTACGACAACACGACTGGCTTCATATGTATGCCAACCTGACTTCGGAC ACACCATTGCCCCCTTGGGTGACAGCGAACTATTTCTTCCAACCATATCTCATCCCGCAAAGCGGACCCTCGGAC ATCTACATACTCAGCACCCGCGGGTTCGGTACCAACATAAGCTGCACACCTGTGCCCAGATTCTCGATACGGCCC CAGAACGGGACGTCTGCCAGTTGGTGTTCGAACCCGACGCGCTATCTCGCCGACGTATCGGGCGCGGGGAGTAGT CTCGGTGGGAAAGACGCGAATAGATCGATAGAGAAAGTTTTCCGTGGCGACTATCCGGATCTGAATAATTTTCAA CTTGATCCCTGCCTTTCTCAGTTCATCGTCACCTGGGGCAGGGCCGTTCCGGGTGATGAGTCTGTGTCTGAGGCA AGTGCTGTTCGCTGCCGCTTTACCCCCGAGATAGCCATGTTCGACGTGGCCGTAGATGTGGGGGGTTTGGTTCAC GGATACAACCGAACTACAGATTTCCAATCAGCTCTGGCGCACGACCTGGATTTCCGCAACCACTCAATGCGACTT TGGGCAGCTCTGTCTCGCGTGTCTGAAAGATTGGAACCTGGTGGCCTCTCGTCCAAAGATAATACTAGGGCTATG GGTTCGATGCATAACGACAGCCTGAGGCATGACGGAATCACGACCTTGATATCAGCTCGAACTGGATCGAAAGAA TTTTTCACTCCTGGCACGCCGCCCCCGGATCCGGTGCAGCTTCTACCGGCAGTTCAGGACACCTTTCGTCTTTAT TTTGCCTACGATACCGCAATCAATTATTTCGTCCTCTCAGATCCAAGCAGCTATCAATCCACCACGGGCTTTAAG CTTATCACCGAGAGACGGCTCTTTCTCGACAATGGCGCCTTTATGATAGCGGTCGTGGTTTTGTCGATAGATATC CTGTTTGCCGTTATTCTTTTGGCCTGGCCATGGTCCGTTGTGCGTGTCCTCCCACGCATGCCGACCGATTTGGCA TCTACGCTCGCATACATCATGCCCAGTCGCCTCATGGACACCTCGGACGCGGTCGACATGAGCGACAGAACATTG AGCTTAGGAAAATATATGGGTAGGGATGGGAAGGAACACTTCGGGATTGAATTGGATCCCTACGTGAAACTCGTT GAACCGGAAAAGTCATCGTTGAGCATGGGGAGCTTGAAGAAGAGGAAGCTACATATATGGCGAAGGAGACCCAAG GATGTCGGCAGCCAAGGCAGGGTATAA |
Transcript | >Hirsu2|6560 ATGGCTCTGATCCTGGCGCCGCTCCAGTCCTTTATTATGAGCGTTGGCCCGGTCATCAGAACAAAGTCGGTTGAT GTCATCGCCAGGGCCCATATCGCTCCATTGAGCCGGCAAGTAGAGATGATGGAATCGGATCAATTTCTGACGAGG GCATATAATTCGGCCTTTCTCAAACAGCAATTTCCACGATTTATGACCCCAGACTATGCTCTTCGTCCTTTCTAC GTCGCGCCAGACTCCGAACAGACGAGCAATACAAAATTGACCGCTACAACGACAAAATTCTCGACGGAACTGACC TGTCGGCCCGGGCAGGTACCAGAGAAGGAGAAACAAGAATGGTGTCATCGCGCACAAGCATGGATGATATTCAAA ATCTCGGATGGCCTAGGTTGCGAGGCCAGGATAAAAACCTGGAAGCCGTACGAAGATGCTGAATTGCGATACGTT GGATACACCGACTATGGCTTTCCAAACGCCCCCATAGAGATGAGCGACCCCCAGTACTCGGACCTCGATCATACG CCGTACCTCAGTCCCAGTACATGCGGCAACCATACCAACCAGTTTGCGGTCGTATGGACAGCGCCCACCGAAAGG CCCGTTTCTTGCGAGACGAGCCCAAAGCACAACTTTACCGTCATCTACTGCCAGGCGCAGTACTTCAAACAAGAA ATGAGGGCGACGGTGAGCGCCGAGGATTTCAGGCCTCTGGACAGTTCCCTCCAGCCGGTATCCGACAGAAAGCCG CTGAGCAGGGCCGAGTTCAATGCGACCGCTTTCGAGGCAAAGCTTGCGAATGGGTATAAAGCAAACCCAGACGGC TACGCATCCGAGGATTGGTTGACGCCGACGGCCGGGCGGCCCCGAGACCGAGAGCTTGGACCCTCACCCAACTTG AAGGTGGACTACGACGTTCAGAGCATGTCACTGATGTCCCATTTCATGCTGAGAGGGCAGTATTCGAATTTCTCG GACCCGGCAGATCTCCAACAAGAGTTGGCGAGAGCGTATCGGCACCTTTTCTCCATGGCCATCCACAGCACGCTC ATCAACGGAACGAACTCTGACGGCGGGGCGGCCGCCTTGTCAACGACCTCTTTATCTGGAATTGTCGTCAGCAGG GTCTTTTCCGCGATAGTCGAAAGCCTGCTTGCTTCTATTGCTGTCCTCGCTTTCACGCTCGTTGGTCTCTGTCGA AAAGCTGATAGCCATCTTGGCTCAAACCCAAACTCAATCTCGCGCCTTTGCGGCCTCGACTATGATGACGAGGTG GTTGAAACGTTCCATGCCCTGGATTATACTAATCAGAAGCGTATTCGTCACGTCGTGGGAAACGATGTGTTCCGG CTCTCTCGTCATGGCAACCATGATAACCAGAGCTATTACATCGAGAGGATCGCTGTTTGTAACACGAAAGATATA CCTTCAGCCTTGGCTGGAAGGACTTGCAGCGGAAGTCAGCAAGGTGGCGATATGCGCCCATTTGCAATAACTCGC CGAGCCGGAGGCTTGCTCCTATTCATTCTAACGTGCTCACTCGCGGTCATTCTTTGGCTCAAAAGACTGGAGGCT ACAAGTAGCCAGGGCGGACTGCCCCGTCCATCCGATAACCCTCTCGTTTCCAAGGTGCTGGAGAAGTACATCCCG ACTCTATTTGCGACTCTGCTGGAGGCATTCTGGGTACTGCTTAATCGGCATCACTGCACACTACAACCTTTCCAG GAGTTGTGCTCCGGCAGAGCATGGCCAAGCAGGACGATAGCGATCACATACTCGTCTATCCCCCCTCCGCTGGCC CTCTGGAGATCTCTCAGCGCTCGTCATTTCAATCTCACGGCGCTCTGTATTATTGCTCTTTCCGGCAATTTTCTC GGCATTGGTCTCGGGGCTCTGTTCAACGAGATCGAGTGGCCGGTGAAGTATCCCGAAATCTTGCAGCCGCAAATG CCTGCAAGCCCCCCCGAATCGTCTAGCTTACGACAACACGACTGGCTTCATATGTATGCCAACCTGACTTCGGAC ACACCATTGCCCCCTTGGGTGACAGCGAACTATTTCTTCCAACCATATCTCATCCCGCAAAGCGGACCCTCGGAC ATCTACATACTCAGCACCCGCGGGTTCGGTACCAACATAAGCTGCACACCTGTGCCCAGATTCTCGATACGGCCC CAGAACGGGACGTCTGCCAGTTGGTGTTCGAACCCGACGCGCTATCTCGCCGACGTATCGGGCGCGGGGAGTAGT CTCGGTGGGAAAGACGCGAATAGATCGATAGAGAAAGTTTTCCGTGGCGACTATCCGGATCTGAATAATTTTCAA CTTGATCCCTGCCTTTCTCAGTTCATCGTCACCTGGGGCAGGGCCGTTCCGGGTGATGAGTCTGTGTCTGAGGCA AGTGCTGTTCGCTGCCGCTTTACCCCCGAGATAGCCATGTTCGACGTGGCCGTAGATGTGGGGGGTTTGGTTCAC GGATACAACCGAACTACAGATTTCCAATCAGCTCTGGCGCACGACCTGGATTTCCGCAACCACTCAATGCGACTT TGGGCAGCTCTGTCTCGCGTGTCTGAAAGATTGGAACCTGGTGGCCTCTCGTCCAAAGATAATACTAGGGCTATG GGTTCGATGCATAACGACAGCCTGAGGCATGACGGAATCACGACCTTGATATCAGCTCGAACTGGATCGAAAGAA TTTTTCACTCCTGGCACGCCGCCCCCGGATCCGGTGCAGCTTCTACCGGCAGTTCAGGACACCTTTCGTCTTTAT TTTGCCTACGATACCGCAATCAATTATTTCGTCCTCTCAGATCCAAGCAGCTATCAATCCACCACGGGCTTTAAG CTTATCACCGAGAGACGGCTCTTTCTCGACAATGGCGCCTTTATGATAGCGGTCGTGGTTTTGTCGATAGATATC CTGTTTGCCGTTATTCTTTTGGCCTGGCCATGGTCCGTTGTGCGTGTCCTCCCACGCATGCCGACCGATTTGGCA TCTACGCTCGCATACATCATGCCCAGTCGCCTCATGGACACCTCGGACGCGGTCGACATGAGCGACAGAACATTG AGCTTAGGAAAATATATGGGTAGGGATGGGAAGGAACACTTCGGGATTGAATTGGATCCCTACGTGAAACTCGTT GAACCGGAAAAGTCATCGTTGAGCATGGGGAGCTTGAAGAAGAGGAAGCTACATATATGGCGAAGGAGACCCAAG GATGTCGGCAGCCAAGGCAGGGTATAA |
Gene | >Hirsu2|6560 ATGGCTCTGATCCTGGCGCCGCTCCAGTCCTTTATTATGAGCGTTGGCCCGGTCATCAGAACAAAGTCGGTTGAT GTCATCGCCAGGGCCCATATCGCTCCATTGAGCCGGCAAGTAGAGATGATGGAATCGGATCAATTTCTGACGAGG GCATATAATTCGGCCTTTCTCAAACAGCAATTTCCACGATTTATGACCCCAGACTATGCTCTTCGTCCTTTCTAC GTCGCGCCAGACTCCGAACAGACGAGCAATACAAAATTGACCGCTACAACGACAAAATTCTCGACGGAACTGACC TGTCGGCCCGGGCAGGTACCAGAGAAGGAGAAACAAGAATGGTGTCATCGCGCACAAGCATGGATGATATTCAAA ATCTCGGATGGCCTAGGTTGCGAGGCCAGGATAAAAACCTGGAAGCCGTACGAAGATGCTGAATTGCGATACGTT GGATACACCGACTATGGCTTTCCAAACGCCCCCATAGAGATGAGCGACCCCCAGTACTCGGACCTCGATCATACG CCGTACCTCAGTCCCAGTACATGCGGCAACCATACCAACCAGTTTGCGGTCGTATGGACAGCGCCCACCGAAAGG CCCGTTTCTTGCGAGACGAGCCCAAAGCACAACTTTACCGTCATCTACTGCCAGGCGCAGTACTTCAAACAAGAA ATGAGGGCGACGGTGAGCGCCGAGGATTTCAGGCCTCTGGACAGTTCCCTCCAGCCGGTATCCGACAGAAAGCCG CTGAGCAGGGCCGAGTTCAATGCGACCGCTTTCGAGGCAAAGCTTGCGAATGGGTATAAAGCAAACCCAGACGGC TACGCATCCGAGGATTGGTTGACGCCGACGGCCGGGCGGCCCCGAGACCGAGAGCTTGGACCCTCACCCAACTTG AAGGTGGACTACGACGTTCAGAGCATGTCACTGATGTCCCATTTCATGCTGAGAGGGCAGTATTCGAATTTCTCG GACCCGGCAGATCTCCAACAAGAGTTGGCGAGAGCGTATCGGCACCTTTTCTCCATGGCCATCCACAGCACGCTC ATCAACGGAACGAACTCTGACGGCGGGGCGGCCGCCTTGTCAACGACCTCTTTATCTGGAATTGTCGTCAGCAGG GTCTTTTCCGCGATAGTCGAAAGCCTGCTTGCTTCTATTGCTGTCCTCGCTTTCACGCTCGTTGGTCTCTGTCGA AAAGCTGATAGCCATCTTGGCTCAAACCCAAACTCAATCTCGCGCCTTTGCGGCCTCGACTATGATGACGAGGTG GTTGAAACGTTCCATGCCCTGGATTATACTAATCAGAAGCGTATTCGTCACGTCGTGGGAAACGATGTGTTCCGG CTCTCTCGTCATGGCAACCATGATAACCAGAGCTATTACATCGAGAGGATCGCTGTTTGTAACACGAAAGATATA CCTTCAGCCTTGGCTGGAAGGACTTGCAGCGGAAGTCAGCAAGGTGGCGATATGCGCCCATTTGCAATAACTCGC CGAGCCGGAGGCTTGCTCCTATTCATTCTAACGTGCTCACTCGCGGTCATTCTTTGGCTCAAAAGACTGGAGGCT ACAAGTAGCCAGGGCGGTTAGTTCCCATAATCACATGTATTGGCCGCAGCGCTCCTACTCACACACGATATGCGC AGGACTGCCCCGTCCATCCGATAACCCTCTCGTTTCCAAGGTGCTGGAGAAGTACATCCCGACTCTATTTGCGAC TCTGCTGGAGGCATTCTGGGTACTGCTTAATCGGCATCACTGCACACTACAACCTTTCCAGGAGTTGTGCTCCGG CAGAGCATGGCCAAGCAGGACGATAGCGATCACATACTCGTCTATCCCCCCTCCGCTGGCCCTCTGGAGATCTCT CAGCGCTCGTCATTTCAATCTCACGGCGCTCTGTATTATTGCTCTTTCCGGCAATTTTCTCGGCATTGGTCTCGG GGCTCTGTTCAACGAGATCGAGTGGCCGGTGAAGTATCCCGAAATCTTGCAGCCGCAAATGCCTGCAAGCCCCCC CGAATCGTCTAGCTTACGACAACACGACTGGCTTCATATGTATGCCAACCTGACTTCGGACACACCATTGCCCCC TTGGGTGACAGCGAACTATTTCTTCCAACCATATCTCATCCCGCAAAGCGGACCCTCGGACATCTACATACTCAG CACCCGCGGGTTCGGTACCAACATAAGCTGCACACCTGTGCCCAGATTCTCGATACGGCCCCAGAACGGGACGTC TGCCAGTTGGTGTTCGAACCCGACGCGCTATCTCGCCGACGTATCGGGCGCGGGGAGTAGTCTCGGTGGGAAAGA CGCGAATAGATCGATAGAGAAAGTTTTCCGTGGCGACTATCCGGATCTGAATAATTTTCAACTTGATCCCTGCCT TTCTCAGTTCATCGTCACCTGGGGCAGGGCCGTTCCGGGTGATGAGTCTGTGTCTGAGGCAAGTGCTGTTCGCTG CCGCTTTACCCCCGAGATAGCCATGTTCGACGTGGCCGTAGATGTGGGGGGTTTGGTTCACGGATACAACCGAAC TACAGATTTCCAATCAGCTCTGGCGCACGACCTGGATTTCCGCAACCACTCAATGCGACTTTGGGCAGCTCTGTC TCGCGTGTCTGAAAGATTGGAACCTGGTGGCCTCTCGTCCAAAGATAATACTAGGGCTATGGGTTCGATGCATAA CGACAGCCTGAGGCATGACGGAATCACGACCTTGATATCAGCTCGAACTGGATCGAAAGAATTTTTCACTCCTGG CACGCCGCCCCCGGATCCGGTGCAGCTTCTACCGGCAGTTCAGGACACCTTTCGTCTTTATTTTGCCTACGATAC CGCAATCAATTATTTCGTCCTCTCAGATCCAAGCAGCTATCAATCCACCACGGGCTTTAAGCTTATCACCGAGAG ACGGCTCTTTCTCGACAATGGCGCCTTTATGATAGCGGTCGTGGTTTTGTCGATAGATATCCTGTTTGCCGTTAT TCTTTTGGCCTGGCCATGGTCCGTTGTGCGTGTCCTCCCACGCATGCCGACCGATTTGGCATCTACGCTCGCATA CATCATGCCCAGTCGCCTCATGGACACCTCGGACGCGGTCGACATGAGCGACAGAACATTGAGCTTAGGAAAATA TATGGGTAGGGATGGGAAGGAACACTTCGGGATTGAATTGGATCCCTACGTGAAACTCGTTGAACCGGAAAAGTC ATCGTTGAGCATGGGGAGCTTGAAGAAGAGGAAGCTACATATATGGCGAAGGAGACCCAAGGATGTCGGCAGCCA AGGCAGGGTATAA |