Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|652
Gene name
LocationContig_113:23989..25481
Strand-
Gene length (bp)1492
Transcript length (bp)1167
Coding sequence length (bp)1167
Protein length (aa) 389

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 39 0.5

Transmembrane Domains

Domain # Start End Length
1 25 47 22
2 59 81 22
3 101 123 22
4 136 158 22
5 173 195 22
6 216 238 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|652
MPPGTEPCQPNGQPVQLIDVRSLRNLTTVLGVASTTWSAVFTLGRLYANRPKLGLGDGLAFLALLLNIAHAVLAI
IFSSHFRYMQKTPLCRLDGQHSQVAFSLAILNFLGLFFAKAASLLLFSQLFTVSTRMRRAIRVGHAANIVICATS
IGFFAYYATPHGSRTWGDFIPLHVIFILYWVIAQGAMGALLDIYIFILPLPVVARLTMSTRERIQVICVFGTAVL
GVVGSIVSLVYRIRTLTEKDAIWEGLVTINCNLVEMGAATVVASAPGFAKFVRRHVLKSELAKSLRWVLGRGRTG
SPDASSSSTRRRNQNQPRTGRGYGPRDPDNDGWLLKSRPSAMDGHESSASTAEDDAHGTKLTGTGEGSKQSGKAA
LSLVREPIDLWLR*
Coding >Hirsu2|652
ATGCCTCCGGGGACAGAGCCTTGCCAGCCTAATGGCCAACCTGTCCAGCTGATCGATGTGCGGTCGCTAAGGAAC
TTGACCACTGTTCTCGGCGTCGCCTCGACAACATGGTCTGCCGTCTTCACCCTCGGTCGACTATACGCCAACAGA
CCTAAGCTGGGCCTCGGCGATGGCCTGGCCTTCCTGGCTCTTCTTCTCAACATTGCTCACGCAGTATTGGCAATC
ATCTTCTCTTCACACTTCCGCTACATGCAAAAGACACCGCTTTGCAGGCTCGATGGACAACATTCACAGGTTGCC
TTCTCATTGGCCATATTGAACTTTCTGGGCTTGTTCTTTGCCAAGGCCGCCAGCCTACTGCTCTTCAGCCAGCTA
TTCACCGTCTCGACTCGAATGCGCCGGGCGATCCGAGTCGGCCATGCTGCCAACATCGTCATTTGCGCAACGAGC
ATTGGATTCTTCGCCTACTACGCAACGCCGCATGGCAGCAGGACTTGGGGCGACTTCATCCCCCTGCATGTCATC
TTCATCCTTTACTGGGTCATAGCCCAAGGGGCGATGGGCGCTCTACTAGACATTTACATCTTCATCCTGCCGCTA
CCGGTGGTTGCCAGGCTCACCATGTCGACGAGAGAACGGATACAGGTCATATGCGTCTTCGGCACGGCCGTTCTT
GGAGTTGTTGGCAGCATCGTGTCACTCGTGTATCGAATTCGGACCCTCACGGAGAAGGACGCAATATGGGAAGGG
CTCGTCACCATAAACTGCAATTTGGTCGAGATGGGCGCGGCAACAGTCGTCGCTTCGGCACCAGGATTCGCCAAG
TTTGTGCGCCGGCACGTTTTGAAGTCTGAACTGGCCAAGTCGCTGCGCTGGGTGCTGGGCCGTGGCCGTACCGGC
AGTCCGGACGCGTCGAGTTCTTCCACCCGGAGGCGAAACCAGAACCAGCCGCGGACCGGACGGGGATATGGCCCG
CGAGACCCGGACAATGATGGTTGGCTTCTCAAATCCCGGCCTTCGGCGATGGACGGGCACGAGTCGAGTGCATCG
ACGGCAGAGGACGATGCTCACGGCACCAAGCTGACCGGCACGGGAGAGGGTAGCAAACAATCGGGGAAAGCTGCT
TTGAGCCTCGTTCGAGAACCAATCGATTTATGGCTACGATGA
Transcript >Hirsu2|652
ATGCCTCCGGGGACAGAGCCTTGCCAGCCTAATGGCCAACCTGTCCAGCTGATCGATGTGCGGTCGCTAAGGAAC
TTGACCACTGTTCTCGGCGTCGCCTCGACAACATGGTCTGCCGTCTTCACCCTCGGTCGACTATACGCCAACAGA
CCTAAGCTGGGCCTCGGCGATGGCCTGGCCTTCCTGGCTCTTCTTCTCAACATTGCTCACGCAGTATTGGCAATC
ATCTTCTCTTCACACTTCCGCTACATGCAAAAGACACCGCTTTGCAGGCTCGATGGACAACATTCACAGGTTGCC
TTCTCATTGGCCATATTGAACTTTCTGGGCTTGTTCTTTGCCAAGGCCGCCAGCCTACTGCTCTTCAGCCAGCTA
TTCACCGTCTCGACTCGAATGCGCCGGGCGATCCGAGTCGGCCATGCTGCCAACATCGTCATTTGCGCAACGAGC
ATTGGATTCTTCGCCTACTACGCAACGCCGCATGGCAGCAGGACTTGGGGCGACTTCATCCCCCTGCATGTCATC
TTCATCCTTTACTGGGTCATAGCCCAAGGGGCGATGGGCGCTCTACTAGACATTTACATCTTCATCCTGCCGCTA
CCGGTGGTTGCCAGGCTCACCATGTCGACGAGAGAACGGATACAGGTCATATGCGTCTTCGGCACGGCCGTTCTT
GGAGTTGTTGGCAGCATCGTGTCACTCGTGTATCGAATTCGGACCCTCACGGAGAAGGACGCAATATGGGAAGGG
CTCGTCACCATAAACTGCAATTTGGTCGAGATGGGCGCGGCAACAGTCGTCGCTTCGGCACCAGGATTCGCCAAG
TTTGTGCGCCGGCACGTTTTGAAGTCTGAACTGGCCAAGTCGCTGCGCTGGGTGCTGGGCCGTGGCCGTACCGGC
AGTCCGGACGCGTCGAGTTCTTCCACCCGGAGGCGAAACCAGAACCAGCCGCGGACCGGACGGGGATATGGCCCG
CGAGACCCGGACAATGATGGTTGGCTTCTCAAATCCCGGCCTTCGGCGATGGACGGGCACGAGTCGAGTGCATCG
ACGGCAGAGGACGATGCTCACGGCACCAAGCTGACCGGCACGGGAGAGGGTAGCAAACAATCGGGGAAAGCTGCT
TTGAGCCTCGTTCGAGAACCAATCGATTTATGGCTACGATGA
Gene >Hirsu2|652
ATGCCTCCGGGGACAGAGCCTTGCCAGCCTAATGGCCAACCTGTCCAGCTGATCGATGTGCGGTCGCTAAGGAAC
TTGACCACTGTTCTCGGCGTCGCCTCGACAACATGGTCTGCCGTCTTCACCCTCGGTCGACTATACGCCAACAGA
CCTAAGCTGGGCCTCGGCGATGGTACGTCCTGTCGCGCAAGAGAGCTTACAGCCCGCTGATATCGAGTCCGCAGG
CCTGGCCTTCCTGGCTCTTCTTCTCAACATTGCTCACGCAGTATTGGCAATCATCTGTGAGATGTCTTCGACTCG
TCGACTGCCCGACGCTTGCTCCAGAAGAAGGCGCTGACGATGCTCGCAGTCTCTTCACACTTCCGCTACATGCAA
AAGACACCGCTTTGCAGGCTCGATGGACAACATTCACAGGTAGGCAGGCAGCTGCCGAGTGGAAGCAGAAGCCGG
TAAATTGCCACCCAGGACTGATGGCCGGCTCAGGTTGCCTTCTCATTGGCCATATTGAACTTTCTGGGCTTGTTC
TTTGCCAAGGCCGCCAGCCTACTGCTCTTCAGCCAGCTATTCACCGTCTCGACTCGAATGCGCCGGGCGATCCGA
GTCGGCCATGCTGCCAACATCGTCATTTGCGCAACGAGCATTGGATTCTTCGCCTACTACGCAACGCCGCATGGC
AGCAGGACTTGGGGCGACTTCATCCCCCTGCATGTCATCTTCATCCTTTACTGGGTCATAGCCCAAGGGGCGATG
GGCGCTCTACTAGACATTTACATCTTCATCCTGCCGCTACCGGTGGTTGCCAGGCTCACCATGTCGACGAGAGAA
CGGATACAGGTCATATGCGTCTTCGGCACGGCCGTTCTGTAAGTGGTGGCAGAGGCGGCGAGTGTCTGTCTGGTC
GTAGTTGGCTGACAGGAAAGCGCAGTGGAGTTGTTGGCAGCATCGTGTCACTCGTGTATCGAATTCGGACCCTCA
CGGAGAAGGACGCAATATGGGAAGGGCTCGTCACCATAAACTGCAAGTGAGTCAAGCGGGACATTTTTTTTTTTG
GCGCACGCACTCCCTGGGCCCCAGACCTGACGCAAAGCTCGACAGTTTGGTCGAGATGGGCGCGGCAACAGTCGT
CGCTTCGGCACCAGGATTCGCCAAGTTTGTGCGCCGGCACGTTTTGAAGTCTGAACTGGCCAAGTCGCTGCGCTG
GGTGCTGGGCCGTGGCCGTACCGGCAGTCCGGACGCGTCGAGTTCTTCCACCCGGAGGCGAAACCAGAACCAGCC
GCGGACCGGACGGGGATATGGCCCGCGAGACCCGGACAATGATGGTTGGCTTCTCAAATCCCGGCCTTCGGCGAT
GGACGGGCACGAGTCGAGTGCATCGACGGCAGAGGACGATGCTCACGGCACCAAGCTGACCGGCACGGGAGAGGG
TAGCAAACAATCGGGGAAAGCTGCTTTGAGCCTCGTTCGAGAACCAATCGATTTATGGCTACGATGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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