© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6507 |
| Gene name | |
| Location | Contig_3353:39..360 |
| Strand | + |
| Gene length (bp) | 321 |
| Transcript length (bp) | 321 |
| Coding sequence length (bp) | 321 |
| Protein length (aa) | 107 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03568 | Peptidase_C50 | Peptidase family C50 | 1.5E-07 | 1 | 20 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P33144|BIMB_EMENI | Separin OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=bimB PE=4 SV=2 | 1 | 94 | 7.0E-18 |
| sp|P18296|CUT1_SCHPO | Separin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cut1 PE=1 SV=3 | 1 | 97 | 5.0E-16 |
| sp|Q03018|ESP1_YEAST | Separin OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ESP1 PE=1 SV=2 | 1 | 95 | 2.0E-14 |
| sp|Q5IBC5|ESP1_ARATH | Separase OS=Arabidopsis thaliana GN=ESP1 PE=2 SV=1 | 1 | 102 | 2.0E-12 |
| sp|Q14674|ESPL1_HUMAN | Separin OS=Homo sapiens GN=ESPL1 PE=1 SV=3 | 1 | 95 | 1.0E-09 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P33144|BIMB_EMENI | Separin OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=bimB PE=4 SV=2 | 1 | 94 | 7.0E-18 |
| sp|P18296|CUT1_SCHPO | Separin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cut1 PE=1 SV=3 | 1 | 97 | 5.0E-16 |
| sp|Q03018|ESP1_YEAST | Separin OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ESP1 PE=1 SV=2 | 1 | 95 | 2.0E-14 |
| sp|Q5IBC5|ESP1_ARATH | Separase OS=Arabidopsis thaliana GN=ESP1 PE=2 SV=1 | 1 | 102 | 2.0E-12 |
| sp|Q14674|ESPL1_HUMAN | Separin OS=Homo sapiens GN=ESPL1 PE=1 SV=3 | 1 | 95 | 1.0E-09 |
| sp|P60330|ESPL1_MOUSE | Separin OS=Mus musculus GN=Espl1 PE=1 SV=1 | 1 | 95 | 3.0E-09 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 80 | 99 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6507 MMAGAPAVVGTLWDVTDRDIDRFAGRAFELWGLLQRGAFADGRRRNDDDAAGPGQTGKRQAAPSASLPEAVARAR QACRFRYLNAAAAVVYGIPVYIAGDQGGSAE* |
| Coding | >Hirsu2|6507 ATGATGGCCGGCGCGCCGGCCGTCGTCGGCACCCTGTGGGACGTGACGGACCGCGACATCGACCGCTTCGCCGGC CGCGCCTTCGAGCTCTGGGGCCTGCTCCAGCGCGGCGCCTTTGCCGACGGCCGCCGCCGCAACGACGACGACGCC GCCGGCCCCGGTCAGACCGGCAAGAGGCAGGCCGCGCCGTCCGCGTCGCTGCCCGAGGCCGTCGCCAGGGCCAGA CAGGCCTGCCGGTTCCGCTACCTCAACGCAGCCGCCGCCGTCGTCTACGGCATCCCCGTCTACATCGCCGGCGAC CAGGGCGGCAGCGCCGAGTGA |
| Transcript | >Hirsu2|6507 ATGATGGCCGGCGCGCCGGCCGTCGTCGGCACCCTGTGGGACGTGACGGACCGCGACATCGACCGCTTCGCCGGC CGCGCCTTCGAGCTCTGGGGCCTGCTCCAGCGCGGCGCCTTTGCCGACGGCCGCCGCCGCAACGACGACGACGCC GCCGGCCCCGGTCAGACCGGCAAGAGGCAGGCCGCGCCGTCCGCGTCGCTGCCCGAGGCCGTCGCCAGGGCCAGA CAGGCCTGCCGGTTCCGCTACCTCAACGCAGCCGCCGCCGTCGTCTACGGCATCCCCGTCTACATCGCCGGCGAC CAGGGCGGCAGCGCCGAGTGA |
| Gene | >Hirsu2|6507 ATGATGGCCGGCGCGCCGGCCGTCGTCGGCACCCTGTGGGACGTGACGGACCGCGACATCGACCGCTTCGCCGGC CGCGCCTTCGAGCTCTGGGGCCTGCTCCAGCGCGGCGCCTTTGCCGACGGCCGCCGCCGCAACGACGACGACGCC GCCGGCCCCGGTCAGACCGGCAAGAGGCAGGCCGCGCCGTCCGCGTCGCTGCCCGAGGCCGTCGCCAGGGCCAGA CAGGCCTGCCGGTTCCGCTACCTCAACGCAGCCGCCGCCGTCGTCTACGGCATCCCCGTCTACATCGCCGGCGAC CAGGGCGGCAGCGCCGAGTGA |