© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6502 |
| Gene name | |
| Location | Contig_335:16365..17841 |
| Strand | + |
| Gene length (bp) | 1476 |
| Transcript length (bp) | 1476 |
| Coding sequence length (bp) | 1476 |
| Protein length (aa) | 492 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01266 | DAO | FAD dependent oxidoreductase | 4.7E-37 | 44 | 433 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9Y7N4|OXDA_SCHPO | D-amino-acid oxidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dao1 PE=3 SV=1 | 43 | 435 | 2.0E-21 |
| sp|O45307|OXDD1_CAEEL | D-aspartate oxidase 1 OS=Caenorhabditis elegans GN=ddo-1 PE=1 SV=2 | 230 | 447 | 2.0E-11 |
| sp|Q9Z1M5|OXDA_CAVPO | D-amino-acid oxidase OS=Cavia porcellus GN=DAO PE=2 SV=1 | 45 | 439 | 2.0E-11 |
| sp|Q99042|OXDA_TRIVR | D-amino-acid oxidase OS=Trigonopsis variabilis GN=DAO1 PE=3 SV=1 | 45 | 438 | 7.0E-11 |
| sp|Q556W1|OXDD_DICDI | D-aspartate oxidase OS=Dictyostelium discoideum GN=ddo-1 PE=3 SV=1 | 226 | 438 | 3.0E-10 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9Y7N4|OXDA_SCHPO | D-amino-acid oxidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dao1 PE=3 SV=1 | 43 | 435 | 2.0E-21 |
| sp|O45307|OXDD1_CAEEL | D-aspartate oxidase 1 OS=Caenorhabditis elegans GN=ddo-1 PE=1 SV=2 | 230 | 447 | 2.0E-11 |
| sp|Q9Z1M5|OXDA_CAVPO | D-amino-acid oxidase OS=Cavia porcellus GN=DAO PE=2 SV=1 | 45 | 439 | 2.0E-11 |
| sp|Q99042|OXDA_TRIVR | D-amino-acid oxidase OS=Trigonopsis variabilis GN=DAO1 PE=3 SV=1 | 45 | 438 | 7.0E-11 |
| sp|Q556W1|OXDD_DICDI | D-aspartate oxidase OS=Dictyostelium discoideum GN=ddo-1 PE=3 SV=1 | 226 | 438 | 3.0E-10 |
| sp|P14920|OXDA_HUMAN | D-amino-acid oxidase OS=Homo sapiens GN=DAO PE=1 SV=3 | 45 | 439 | 1.0E-09 |
| sp|Q95XG9|OXDA_CAEEL | D-amino-acid oxidase OS=Caenorhabditis elegans GN=daao-1 PE=1 SV=2 | 241 | 447 | 2.0E-09 |
| sp|A8WXM1|OXDD1_CAEBR | D-aspartate oxidase 1 OS=Caenorhabditis briggsae GN=CBG04460 PE=3 SV=1 | 230 | 442 | 5.0E-09 |
| sp|P31228|OXDD_BOVIN | D-aspartate oxidase OS=Bos taurus GN=DDO PE=1 SV=2 | 233 | 438 | 4.0E-08 |
| sp|Q19564|OXDD2_CAEEL | D-aspartate oxidase 2 OS=Caenorhabditis elegans GN=ddo-2 PE=1 SV=1 | 271 | 437 | 6.0E-08 |
| sp|A8XJ44|OXDA_CAEBR | D-amino-acid oxidase OS=Caenorhabditis briggsae GN=daao-1 PE=3 SV=1 | 241 | 439 | 8.0E-08 |
| sp|Q99489|OXDD_HUMAN | D-aspartate oxidase OS=Homo sapiens GN=DDO PE=2 SV=1 | 252 | 438 | 2.0E-07 |
| sp|A3KCL7|OXDD_PIG | D-aspartate oxidase OS=Sus scrofa GN=DDO PE=2 SV=1 | 272 | 429 | 3.0E-07 |
| sp|O01739|OXDD3_CAEEL | D-aspartate oxidase 3 OS=Caenorhabditis elegans GN=ddo-3 PE=1 SV=1 | 235 | 439 | 2.0E-06 |
| sp|P00371|OXDA_PIG | D-amino-acid oxidase OS=Sus scrofa GN=DAO PE=1 SV=2 | 226 | 429 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 26 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 45 | 62 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6502 MNGITHTDEVKLARREARNGFSYPEISLSTKGEPLTAVSADSKHVLVIGAGVSGLMVAWMLLDKGYRVTILADDW AWTNDFERSRMTSQIAGALWEFPPGGCGLTEINETSGSGGWAAIEHYREWALQSYEFYQKYCCDVSNYHEDTGHS FGLRFAKLHQFFYTDVNKPENENEYAKLQAIQEAKERMGEVEIHTREELRTKFKDIIQPDFQNQSLESAYSHRAP IINTDKAMAYLMALVMAKGASMESRKLDKPIRDIGKQLLRDFDAQAIVNATGLGAKELANDPDVYPVRGAVRRVE NTHRGQFRHLNDAYLVPAQRDENNHPTKTVFIVPRNDDVLYVGSIIQPNNDELKLTPDSPEVQVMWDRASEFMPS LRHAGFCPGYPFAQGLRPFTTKNAKVRADENADFPLVHNYGHGGSGWTLGVGTARCAVAILEQLWDLGSSALKDK AVAVNRDVCKPSDATEDSLAADPCQNKDKLFFKGLVRKNVV* |
| Coding | >Hirsu2|6502 ATGAACGGAATTACCCATACTGACGAGGTAAAACTCGCCAGACGGGAAGCTCGCAACGGCTTTAGCTATCCAGAG ATATCTCTCTCGACCAAAGGCGAGCCTTTGACGGCCGTCAGCGCCGACTCGAAACACGTTCTCGTCATCGGGGCC GGCGTCAGCGGCCTGATGGTGGCCTGGATGCTCCTCGACAAGGGCTACCGAGTGACCATCCTTGCCGACGACTGG GCCTGGACGAACGACTTCGAAAGGTCCCGCATGACGTCGCAGATCGCCGGTGCGCTCTGGGAGTTTCCCCCCGGC GGGTGCGGCTTGACCGAGATCAACGAAACTTCCGGCTCCGGCGGGTGGGCTGCCATCGAGCACTACCGCGAGTGG GCACTGCAGAGCTACGAGTTCTACCAGAAGTACTGCTGCGACGTGTCGAACTATCATGAGGACACCGGCCATTCG TTTGGACTGCGATTCGCCAAGCTGCATCAATTCTTTTACACCGACGTCAACAAGCCCGAGAACGAGAACGAGTAC GCGAAGCTGCAGGCGATCCAGGAGGCCAAAGAGCGGATGGGTGAAGTCGAGATCCACACCAGGGAGGAACTGAGG ACAAAGTTTAAGGACATCATCCAGCCAGATTTCCAGAACCAGTCTCTCGAGAGCGCCTACAGTCACAGGGCCCCT ATCATCAACACAGACAAGGCAATGGCCTACCTCATGGCCCTGGTGATGGCCAAGGGCGCGAGTATGGAGAGCCGG AAGCTCGACAAGCCCATCAGAGACATTGGTAAGCAGCTGTTGAGAGACTTTGACGCCCAAGCCATCGTCAACGCC ACCGGCCTCGGCGCCAAGGAGTTGGCCAACGACCCGGACGTGTACCCCGTCCGAGGAGCGGTCCGGCGTGTCGAA AACACACACCGGGGCCAATTCAGGCACCTGAACGATGCGTACCTTGTCCCTGCGCAGCGGGACGAAAACAACCAC CCGACAAAGACCGTCTTCATCGTCCCGCGCAACGACGACGTTCTGTACGTCGGCTCCATCATACAGCCCAACAAC GACGAGCTGAAACTTACGCCGGATTCGCCCGAGGTCCAAGTCATGTGGGACCGCGCGAGTGAGTTCATGCCAAGC CTGCGCCACGCCGGCTTCTGCCCCGGCTATCCGTTCGCCCAGGGCCTCCGGCCCTTCACCACCAAAAACGCAAAG GTCAGGGCCGACGAGAATGCGGATTTCCCTCTGGTGCACAACTACGGCCACGGAGGCTCCGGTTGGACGCTTGGC GTCGGAACCGCACGCTGTGCTGTGGCTATCCTGGAACAGCTATGGGATCTTGGCAGCTCTGCGCTGAAGGATAAA GCAGTCGCGGTCAACAGGGACGTATGTAAACCCAGTGATGCCACCGAGGACTCGCTTGCAGCCGATCCTTGCCAA AACAAGGACAAATTGTTCTTTAAAGGTCTGGTTCGAAAGAATGTTGTTTAG |
| Transcript | >Hirsu2|6502 ATGAACGGAATTACCCATACTGACGAGGTAAAACTCGCCAGACGGGAAGCTCGCAACGGCTTTAGCTATCCAGAG ATATCTCTCTCGACCAAAGGCGAGCCTTTGACGGCCGTCAGCGCCGACTCGAAACACGTTCTCGTCATCGGGGCC GGCGTCAGCGGCCTGATGGTGGCCTGGATGCTCCTCGACAAGGGCTACCGAGTGACCATCCTTGCCGACGACTGG GCCTGGACGAACGACTTCGAAAGGTCCCGCATGACGTCGCAGATCGCCGGTGCGCTCTGGGAGTTTCCCCCCGGC GGGTGCGGCTTGACCGAGATCAACGAAACTTCCGGCTCCGGCGGGTGGGCTGCCATCGAGCACTACCGCGAGTGG GCACTGCAGAGCTACGAGTTCTACCAGAAGTACTGCTGCGACGTGTCGAACTATCATGAGGACACCGGCCATTCG TTTGGACTGCGATTCGCCAAGCTGCATCAATTCTTTTACACCGACGTCAACAAGCCCGAGAACGAGAACGAGTAC GCGAAGCTGCAGGCGATCCAGGAGGCCAAAGAGCGGATGGGTGAAGTCGAGATCCACACCAGGGAGGAACTGAGG ACAAAGTTTAAGGACATCATCCAGCCAGATTTCCAGAACCAGTCTCTCGAGAGCGCCTACAGTCACAGGGCCCCT ATCATCAACACAGACAAGGCAATGGCCTACCTCATGGCCCTGGTGATGGCCAAGGGCGCGAGTATGGAGAGCCGG AAGCTCGACAAGCCCATCAGAGACATTGGTAAGCAGCTGTTGAGAGACTTTGACGCCCAAGCCATCGTCAACGCC ACCGGCCTCGGCGCCAAGGAGTTGGCCAACGACCCGGACGTGTACCCCGTCCGAGGAGCGGTCCGGCGTGTCGAA AACACACACCGGGGCCAATTCAGGCACCTGAACGATGCGTACCTTGTCCCTGCGCAGCGGGACGAAAACAACCAC CCGACAAAGACCGTCTTCATCGTCCCGCGCAACGACGACGTTCTGTACGTCGGCTCCATCATACAGCCCAACAAC GACGAGCTGAAACTTACGCCGGATTCGCCCGAGGTCCAAGTCATGTGGGACCGCGCGAGTGAGTTCATGCCAAGC CTGCGCCACGCCGGCTTCTGCCCCGGCTATCCGTTCGCCCAGGGCCTCCGGCCCTTCACCACCAAAAACGCAAAG GTCAGGGCCGACGAGAATGCGGATTTCCCTCTGGTGCACAACTACGGCCACGGAGGCTCCGGTTGGACGCTTGGC GTCGGAACCGCACGCTGTGCTGTGGCTATCCTGGAACAGCTATGGGATCTTGGCAGCTCTGCGCTGAAGGATAAA GCAGTCGCGGTCAACAGGGACGTATGTAAACCCAGTGATGCCACCGAGGACTCGCTTGCAGCCGATCCTTGCCAA AACAAGGACAAATTGTTCTTTAAAGGTCTGGTTCGAAAGAATGTTGTTTAG |
| Gene | >Hirsu2|6502 ATGAACGGAATTACCCATACTGACGAGGTAAAACTCGCCAGACGGGAAGCTCGCAACGGCTTTAGCTATCCAGAG ATATCTCTCTCGACCAAAGGCGAGCCTTTGACGGCCGTCAGCGCCGACTCGAAACACGTTCTCGTCATCGGGGCC GGCGTCAGCGGCCTGATGGTGGCCTGGATGCTCCTCGACAAGGGCTACCGAGTGACCATCCTTGCCGACGACTGG GCCTGGACGAACGACTTCGAAAGGTCCCGCATGACGTCGCAGATCGCCGGTGCGCTCTGGGAGTTTCCCCCCGGC GGGTGCGGCTTGACCGAGATCAACGAAACTTCCGGCTCCGGCGGGTGGGCTGCCATCGAGCACTACCGCGAGTGG GCACTGCAGAGCTACGAGTTCTACCAGAAGTACTGCTGCGACGTGTCGAACTATCATGAGGACACCGGCCATTCG TTTGGACTGCGATTCGCCAAGCTGCATCAATTCTTTTACACCGACGTCAACAAGCCCGAGAACGAGAACGAGTAC GCGAAGCTGCAGGCGATCCAGGAGGCCAAAGAGCGGATGGGTGAAGTCGAGATCCACACCAGGGAGGAACTGAGG ACAAAGTTTAAGGACATCATCCAGCCAGATTTCCAGAACCAGTCTCTCGAGAGCGCCTACAGTCACAGGGCCCCT ATCATCAACACAGACAAGGCAATGGCCTACCTCATGGCCCTGGTGATGGCCAAGGGCGCGAGTATGGAGAGCCGG AAGCTCGACAAGCCCATCAGAGACATTGGTAAGCAGCTGTTGAGAGACTTTGACGCCCAAGCCATCGTCAACGCC ACCGGCCTCGGCGCCAAGGAGTTGGCCAACGACCCGGACGTGTACCCCGTCCGAGGAGCGGTCCGGCGTGTCGAA AACACACACCGGGGCCAATTCAGGCACCTGAACGATGCGTACCTTGTCCCTGCGCAGCGGGACGAAAACAACCAC CCGACAAAGACCGTCTTCATCGTCCCGCGCAACGACGACGTTCTGTACGTCGGCTCCATCATACAGCCCAACAAC GACGAGCTGAAACTTACGCCGGATTCGCCCGAGGTCCAAGTCATGTGGGACCGCGCGAGTGAGTTCATGCCAAGC CTGCGCCACGCCGGCTTCTGCCCCGGCTATCCGTTCGCCCAGGGCCTCCGGCCCTTCACCACCAAAAACGCAAAG GTCAGGGCCGACGAGAATGCGGATTTCCCTCTGGTGCACAACTACGGCCACGGAGGCTCCGGTTGGACGCTTGGC GTCGGAACCGCACGCTGTGCTGTGGCTATCCTGGAACAGCTATGGGATCTTGGCAGCTCTGCGCTGAAGGATAAA GCAGTCGCGGTCAACAGGGACGTATGTAAACCCAGTGATGCCACCGAGGACTCGCTTGCAGCCGATCCTTGCCAA AACAAGGACAAATTGTTCTTTAAAGGTCTGGTTCGAAAGAATGTTGTTTAG |