© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|65 |
| Gene name | |
| Location | Contig_1007:4217..6144 |
| Strand | - |
| Gene length (bp) | 1927 |
| Transcript length (bp) | 1683 |
| Coding sequence length (bp) | 1683 |
| Protein length (aa) | 561 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.4655 | 0.8467 | 0.2637 | 0.0549 | 0.0594 | 0.0012 | 0.0212 | 0.0319 | 0.0048 | 0.0069 |
| Orthofinder run ID | 4 |
| Orthogroup | 3426 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|65 MAAAPARFRPNDFGSSPLSIPVHDSSRADAPPPPLPPPRYPLGDAAQPSDDIKRDHRSHASSSFASGYGSMGSSY ADERPNFKRRDTGSTTNGDEGYSSYASTERSRESLQTDIALQHHSKFFFQTPADLYTDTMKRRLDSVRPMDRSPP SLLSASLSDARRHAEPRHPPMPSVQLPYHTRADAHRLLPDASDLDRSPRGRSRRNNSDDATSTQGSFDYTGAEDM EMDDAHAAVGQKRRAASPLPSDEMLLNTVSGSHSDVVRRRDVASRGSPTPRLAAIAQPSPASSSLPPPAVSRPGS YMPAVSMPPSVMTPASSYGRRSPGGTSPGGISPTCSSPYTTPASLTHSPRSSVAARASVHGRAASGTSPRKLDVQ KPGGSKLQGFHMCECCPKKPKKFDTAEELRAHEAEKQYECLFCGNRFKNKNEAERHQNSLHVRRHSWSCSALSGY DRAFHDSTNRPGEADTCGYCGDEFPRSGRVPGTGALSGGIVPRLATEQDWEERIRHLQDVHKFRECNAAKKFYRA DHFRQHLKHSHAGTSGKWTNMLENACMMEEDPSPR* |
| Coding | >Hirsu2|65 ATGGCCGCCGCTCCCGCCCGCTTCCGACCGAATGACTTTGGCAGCTCGCCCTTGTCGATACCCGTCCACGACTCG TCGAGAGCCGACGCGCCGCCGCCGCCCCTGCCTCCTCCCCGATACCCTCTCGGCGATGCCGCCCAGCCGTCCGAC GACATAAAGAGGGACCACCGCAGCCACGCCTCGTCCTCCTTCGCCAGCGGCTACGGCAGCATGGGCTCCTCCTAC GCCGACGAGCGCCCCAACTTCAAGAGGAGGGATACCGGCAGCACCACCAACGGCGACGAGGGCTACTCGAGCTAT GCCTCGACCGAGAGATCTCGCGAGTCTTTGCAGACCGACATTGCTCTGCAGCACCACAGCAAATTCTTCTTCCAG ACACCCGCCGACCTCTACACCGACACCATGAAGCGGAGGCTCGATTCGGTCCGCCCCATGGACAGATCCCCGCCC TCGCTGCTCAGCGCCTCCCTCAGCGATGCCCGACGACACGCCGAGCCACGGCATCCGCCGATGCCCTCCGTCCAG CTCCCCTACCACACCCGCGCCGACGCCCACCGCCTGCTGCCCGACGCGTCCGACCTGGACCGCTCGCCGAGGGGA CGGTCGCGGAGGAACAACAGCGACGACGCGACGTCGACGCAGGGCAGCTTCGACTACACCGGCGCCGAGGACATG GAGATGGACGACGCCCACGCCGCCGTCGGCCAGAAGCGCAGGGCGGCGAGCCCGCTGCCGTCCGATGAGATGCTG CTCAACACCGTCTCGGGCAGCCACAGCGACGTCGTCCGCCGCCGGGACGTGGCCTCTCGCGGCTCTCCCACCCCT CGCCTCGCCGCCATCGCCCAGCCGTCGCCCGCCTCGTCTTCCCTGCCGCCGCCCGCCGTCTCGCGCCCCGGCTCC TACATGCCCGCCGTCTCGATGCCCCCCTCCGTCATGACGCCCGCCAGCTCGTACGGCCGCCGCTCGCCCGGCGGC ACCTCGCCCGGCGGCATCTCCCCCACCTGCAGCTCCCCGTACACGACGCCCGCCTCGCTGACGCACAGCCCCCGG TCCTCGGTGGCCGCCCGAGCTTCGGTCCACGGCAGGGCCGCCTCCGGCACGAGCCCGAGGAAGCTGGACGTGCAG AAGCCGGGCGGCTCCAAGCTGCAGGGCTTCCACATGTGCGAGTGCTGTCCGAAGAAGCCCAAGAAGTTTGACACG GCCGAAGAGCTCCGAGCTCACGAAGCGGAAAAGCAGTACGAGTGTCTGTTCTGCGGCAACCGGTTCAAGAACAAG AACGAGGCCGAGCGCCACCAAAACTCGCTGCACGTCCGACGGCACTCTTGGTCATGCTCGGCGCTGTCCGGCTAC GACCGCGCGTTTCACGACTCGACGAACCGCCCGGGCGAAGCCGACACGTGTGGCTACTGCGGCGACGAGTTCCCC CGATCGGGCCGCGTACCCGGCACCGGAGCCCTCAGCGGCGGCATCGTGCCGAGGCTCGCGACGGAGCAGGACTGG GAGGAGCGGATTCGCCACCTGCAGGACGTGCACAAGTTCCGGGAGTGCAACGCGGCCAAGAAGTTTTACCGGGCG GATCATTTCCGCCAACACCTGAAGCACAGCCATGCCGGGACGAGCGGCAAGTGGACGAACATGCTGGAAAACGCG TGCATGATGGAAGAAGATCCGTCGCCGAGGTGA |
| Transcript | >Hirsu2|65 ATGGCCGCCGCTCCCGCCCGCTTCCGACCGAATGACTTTGGCAGCTCGCCCTTGTCGATACCCGTCCACGACTCG TCGAGAGCCGACGCGCCGCCGCCGCCCCTGCCTCCTCCCCGATACCCTCTCGGCGATGCCGCCCAGCCGTCCGAC GACATAAAGAGGGACCACCGCAGCCACGCCTCGTCCTCCTTCGCCAGCGGCTACGGCAGCATGGGCTCCTCCTAC GCCGACGAGCGCCCCAACTTCAAGAGGAGGGATACCGGCAGCACCACCAACGGCGACGAGGGCTACTCGAGCTAT GCCTCGACCGAGAGATCTCGCGAGTCTTTGCAGACCGACATTGCTCTGCAGCACCACAGCAAATTCTTCTTCCAG ACACCCGCCGACCTCTACACCGACACCATGAAGCGGAGGCTCGATTCGGTCCGCCCCATGGACAGATCCCCGCCC TCGCTGCTCAGCGCCTCCCTCAGCGATGCCCGACGACACGCCGAGCCACGGCATCCGCCGATGCCCTCCGTCCAG CTCCCCTACCACACCCGCGCCGACGCCCACCGCCTGCTGCCCGACGCGTCCGACCTGGACCGCTCGCCGAGGGGA CGGTCGCGGAGGAACAACAGCGACGACGCGACGTCGACGCAGGGCAGCTTCGACTACACCGGCGCCGAGGACATG GAGATGGACGACGCCCACGCCGCCGTCGGCCAGAAGCGCAGGGCGGCGAGCCCGCTGCCGTCCGATGAGATGCTG CTCAACACCGTCTCGGGCAGCCACAGCGACGTCGTCCGCCGCCGGGACGTGGCCTCTCGCGGCTCTCCCACCCCT CGCCTCGCCGCCATCGCCCAGCCGTCGCCCGCCTCGTCTTCCCTGCCGCCGCCCGCCGTCTCGCGCCCCGGCTCC TACATGCCCGCCGTCTCGATGCCCCCCTCCGTCATGACGCCCGCCAGCTCGTACGGCCGCCGCTCGCCCGGCGGC ACCTCGCCCGGCGGCATCTCCCCCACCTGCAGCTCCCCGTACACGACGCCCGCCTCGCTGACGCACAGCCCCCGG TCCTCGGTGGCCGCCCGAGCTTCGGTCCACGGCAGGGCCGCCTCCGGCACGAGCCCGAGGAAGCTGGACGTGCAG AAGCCGGGCGGCTCCAAGCTGCAGGGCTTCCACATGTGCGAGTGCTGTCCGAAGAAGCCCAAGAAGTTTGACACG GCCGAAGAGCTCCGAGCTCACGAAGCGGAAAAGCAGTACGAGTGTCTGTTCTGCGGCAACCGGTTCAAGAACAAG AACGAGGCCGAGCGCCACCAAAACTCGCTGCACGTCCGACGGCACTCTTGGTCATGCTCGGCGCTGTCCGGCTAC GACCGCGCGTTTCACGACTCGACGAACCGCCCGGGCGAAGCCGACACGTGTGGCTACTGCGGCGACGAGTTCCCC CGATCGGGCCGCGTACCCGGCACCGGAGCCCTCAGCGGCGGCATCGTGCCGAGGCTCGCGACGGAGCAGGACTGG GAGGAGCGGATTCGCCACCTGCAGGACGTGCACAAGTTCCGGGAGTGCAACGCGGCCAAGAAGTTTTACCGGGCG GATCATTTCCGCCAACACCTGAAGCACAGCCATGCCGGGACGAGCGGCAAGTGGACGAACATGCTGGAAAACGCG TGCATGATGGAAGAAGATCCGTCGCCGAGGTGA |
| Gene | >Hirsu2|65 ATGGCCGCCGCTCCCGCCCGCTTCCGACCGAATGACTTTGGCAGCTCGCCCTTGTCGATACCCGTCCACGACTCG TCGAGAGCCGACGCGCCGCCGCCGCCCCTGCCTCCTCCCCGATACCCTCTCGGCGATGCCGCCCAGCCGTCCGAC GACATAAAGAGGGACCACCGCAGCCACGCCTCGTCCTCCTTCGCCAGCGGCTACGGCAGCATGGGCTCCTCCTAC GCCGACGAGCGCCCCAACTTCAAGAGGAGGGATACCGGCAGCACCACCAACGGCGACGAGGGCTACTCGAGCTAT GCCTCGACCGAGAGGTACCAACTCCCGTCTCTACCGCGCTCCGGCACTTTCTTCCTTCCTCTCCTCCCTCTTCTC CCATCTCCTCCTTCTTTTGCGTCTTGCCGCTGAGCACCGTTGCCCTTTGTGTGCATGGTACGATGCTGACTCTTT CCGCCTCTCGTGCAGATCTCGCGAGTCTTTGCAGACCGACATTGCTCTGCAGCACCACAGCAAATTCTTCTTCCA GACACCCGCCGACCTCTACACCGACACCATGAAGCGGAGGCTCGATTCGGTCCGCCCCATGGACAGATCCCCGCC CTCGCTGCTCAGCGCCTCCCTCAGCGATGCCCGACGACACGCCGAGCCACGGCATCCGCCGATGCCCTCCGTCCA GCTCCCCTACCACACCCGCGCCGACGCCCACCGCCTGCTGCCCGACGCGTCCGACCTGGACCGCTCGCCGAGGGG ACGGTCGCGGAGGAACAACAGCGACGACGCGACGTCGACGCAGGGCAGCTTCGACTACACCGGCGCCGAGGACAT GGAGATGGACGACGCCCACGCCGCCGTCGGCCAGAAGCGCAGGGCGGCGAGCCCGCTGCCGTCCGATGAGATGCT GCTCAACACCGTCTCGGGCAGCCACAGCGACGTCGTCCGCCGCCGGGACGTGGCCTCTCGCGGCTCTCCCACCCC TCGCCTCGCCGCCATCGCCCAGCCGTCGCCCGCCTCGTCTTCCCTGCCGCCGCCCGCCGTCTCGCGCCCCGGCTC CTACATGCCCGCCGTCTCGATGCCCCCCTCCGTCATGACGCCCGCCAGCTCGTACGGCCGCCGCTCGCCCGGCGG CACCTCGCCCGGCGGCATCTCCCCCACCTGCAGCTCCCCGTACACGACGCCCGCCTCGCTGACGCACAGCCCCCG GTCCTCGGTGGCCGCCCGAGCTTCGGTCCACGGCAGGGCCGCCTCCGGCACGAGCCCGAGGAAGCTGGACGTGCA GAAGCCGGGCGGCTCCAAGCTGCAGGGCTTCCACATGTGCGAGTGCTGTCCGAAGAAGCCCAAGAAGTTTGACAC GGCCGAAGAGCTCCGGTGAGTGGACAACGACTCTCCTTTTTCTCGGTGGAATTCTCGTCGTCAAGTCGTCGACGT CGTCCCTCTTCGCCGCTAACGCCCGACGCGCAGAGCTCACGAAGCGGAAAAGCAGTACGAGTGTCTGTTCTGCGG CAACCGGTTCAAGAACAAGAACGAGGCCGAGCGCCACCAAAACTCGCTGCACGTCCGACGGCACTCTTGGTCATG CTCGGCGCTGTCCGGCTACGACCGCGCGTTTCACGACTCGACGAACCGCCCGGGCGAAGCCGACACGTGTGGCTA CTGCGGCGACGAGTTCCCCCGATCGGGCCGCGTACCCGGCACCGGAGCCCTCAGCGGCGGCATCGTGCCGAGGCT CGCGACGGAGCAGGACTGGGAGGAGCGGATTCGCCACCTGCAGGACGTGCACAAGTTCCGGGAGTGCAACGCGGC CAAGAAGTTTTACCGGGCGGATCATTTCCGCCAACACCTGAAGCACAGCCATGCCGGGACGAGCGGCAAGTGGAC GAACATGCTGGAAAACGCGTGCATGATGGAAGAAGATCCGTCGCCGAGGTGA |