Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6488
Gene name
LocationContig_334:10316..11670
Strand-
Gene length (bp)1354
Transcript length (bp)1167
Coding sequence length (bp)1167
Protein length (aa) 389

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.5

Transmembrane Domains

Domain # Start End Length
1 37 59 22
2 72 94 22
3 123 145 22
4 152 174 22
5 206 228 22
6 241 263 22
7 278 300 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6488
MGWSLDSQIDEAVASGRVPTDVPPDVIEGLHESRDEDGIIGIIVVAAVAALVVTLRMLSRMFIVKRVGSDDVLAL
LSLVAFIPFVALAIRQIQLGGGRDYLFEELVMDEATQATLQTYDTVSHIAYITALTLCRLSGILFYYRICRLRHE
FLIGLRFCFGIVVVAYLMQVSLIAFHSMPVSALWTPELAFVDEDDIVYFIQWGQVHIVISITSLLCDLLLFGIPV
AMLRILKTMPKKQKVQLACILLPGIAVVGISITRLVFQIRVAFGDGTEHHPDFSFLFFLAVEAAEISATLIALSI
PGLKPLLDKFILRKDNLADAAHSNDGNSRLRALRPVSDGSTLSIDKTGHYETEVSTFSKQDTMRNKIRVTTDVKV
QDEKYQPWEPGYI*
Coding >Hirsu2|6488
ATGGGCTGGTCCCTAGACTCCCAGATCGATGAAGCTGTTGCTTCTGGTCGTGTCCCCACGGACGTACCGCCGGAC
GTGATCGAAGGGCTCCATGAGAGCCGGGACGAGGACGGCATCATCGGCATCATCGTCGTCGCCGCCGTCGCCGCC
CTGGTCGTCACTCTCCGAATGCTCTCCAGAATGTTCATCGTCAAGCGTGTCGGATCCGACGATGTCCTCGCCCTC
CTGTCGCTGGTGGCATTCATTCCCTTTGTCGCCCTTGCCATTCGGCAGATCCAACTCGGTGGCGGAAGAGATTAC
CTCTTTGAGGAACTCGTCATGGATGAGGCAACACAGGCCACGCTTCAGACCTACGACACCGTCTCGCACATTGCC
TACATCACGGCGCTCACACTCTGCCGTCTGTCGGGTATTCTATTTTACTACCGCATCTGTCGCCTCCGGCACGAG
TTTCTCATCGGCCTCAGGTTTTGCTTCGGCATCGTCGTCGTCGCCTACCTAATGCAGGTGTCGCTCATCGCCTTC
CACTCCATGCCCGTGAGCGCCCTCTGGACTCCTGAACTTGCCTTTGTGGATGAAGACGATATCGTCTACTTCATA
CAATGGGGTCAAGTCCACATTGTAATTTCTATTACATCCTTGCTCTGCGACTTGCTCCTCTTTGGAATCCCCGTA
GCAATGTTGCGAATTCTCAAAACGATGCCTAAGAAGCAAAAAGTTCAACTTGCCTGCATCCTCCTACCAGGCATT
GCCGTAGTTGGCATCTCGATAACCCGACTTGTGTTTCAGATCAGGGTCGCATTCGGGGATGGTACTGAACATCAC
CCTGATTTCTCTTTTCTATTCTTTCTTGCGGTCGAGGCTGCAGAGATAAGCGCGACGCTGATAGCTCTATCGATC
CCGGGCCTTAAGCCGCTGCTCGACAAGTTCATCCTCCGAAAGGACAACCTGGCCGACGCTGCTCACTCCAACGAT
GGGAACAGTAGGCTGCGCGCCCTGAGGCCAGTATCGGACGGCAGCACGCTCTCGATCGATAAGACGGGCCACTAC
GAAACGGAGGTCAGCACGTTCTCGAAGCAGGACACGATGCGTAATAAAATCCGGGTCACGACGGACGTCAAGGTC
CAAGATGAGAAGTACCAGCCTTGGGAACCAGGGTACATATAA
Transcript >Hirsu2|6488
ATGGGCTGGTCCCTAGACTCCCAGATCGATGAAGCTGTTGCTTCTGGTCGTGTCCCCACGGACGTACCGCCGGAC
GTGATCGAAGGGCTCCATGAGAGCCGGGACGAGGACGGCATCATCGGCATCATCGTCGTCGCCGCCGTCGCCGCC
CTGGTCGTCACTCTCCGAATGCTCTCCAGAATGTTCATCGTCAAGCGTGTCGGATCCGACGATGTCCTCGCCCTC
CTGTCGCTGGTGGCATTCATTCCCTTTGTCGCCCTTGCCATTCGGCAGATCCAACTCGGTGGCGGAAGAGATTAC
CTCTTTGAGGAACTCGTCATGGATGAGGCAACACAGGCCACGCTTCAGACCTACGACACCGTCTCGCACATTGCC
TACATCACGGCGCTCACACTCTGCCGTCTGTCGGGTATTCTATTTTACTACCGCATCTGTCGCCTCCGGCACGAG
TTTCTCATCGGCCTCAGGTTTTGCTTCGGCATCGTCGTCGTCGCCTACCTAATGCAGGTGTCGCTCATCGCCTTC
CACTCCATGCCCGTGAGCGCCCTCTGGACTCCTGAACTTGCCTTTGTGGATGAAGACGATATCGTCTACTTCATA
CAATGGGGTCAAGTCCACATTGTAATTTCTATTACATCCTTGCTCTGCGACTTGCTCCTCTTTGGAATCCCCGTA
GCAATGTTGCGAATTCTCAAAACGATGCCTAAGAAGCAAAAAGTTCAACTTGCCTGCATCCTCCTACCAGGCATT
GCCGTAGTTGGCATCTCGATAACCCGACTTGTGTTTCAGATCAGGGTCGCATTCGGGGATGGTACTGAACATCAC
CCTGATTTCTCTTTTCTATTCTTTCTTGCGGTCGAGGCTGCAGAGATAAGCGCGACGCTGATAGCTCTATCGATC
CCGGGCCTTAAGCCGCTGCTCGACAAGTTCATCCTCCGAAAGGACAACCTGGCCGACGCTGCTCACTCCAACGAT
GGGAACAGTAGGCTGCGCGCCCTGAGGCCAGTATCGGACGGCAGCACGCTCTCGATCGATAAGACGGGCCACTAC
GAAACGGAGGTCAGCACGTTCTCGAAGCAGGACACGATGCGTAATAAAATCCGGGTCACGACGGACGTCAAGGTC
CAAGATGAGAAGTACCAGCCTTGGGAACCAGGGTACATATAA
Gene >Hirsu2|6488
ATGGGCTGGTCCCTAGACTCCCAGATCGATGAAGCTGTTGCTTCTGGTCGTGTCCCCACGGACGTACCGCCGGAC
GTGATCGAAGGGCTCCATGAGAGCCGGGACGAGGACGGCATCATCGGCATCATCGTCGTCGCCGCCGTCGCCGCC
CTGGTCGTCACTCTCCGAATGCTCTCCAGAATGTTCATCGTCAAGCGTGTCGGATCCGACGATGTCCTCGCCCTC
CTGTCGCTGGTGAGCCCTCTCTCACCGAGTACGAAGCGCCCTGGCCTCGGTGCTCACATGATCTTTTGAAAGGTG
GCATTCATTCCCTTTGTCGCCCTTGCCATTCGGCAGATCCAACTCGGTGGCGGAAGAGATTACCTCTTTGAGGAA
CTCGTCATGGATGAGGCAACACAGGCCACGCTTCAGACCTACGACACCGTCTCGCACATTGCCTACATCACGGCG
CTCACACTCTGCCGTCTGTCGGGTATTCTATTTTACTACCGCATCTGTCGCCTCCGGCACGAGTTTCTCATCGGC
CTCAGGTTTTGCTTCGGCATCGTCGTCGTCGCCTACCTAATGCAGGTGTCGCTCATCGCCTTCCACTCCATGCCC
GTGAGCGCCCTCTGGACTCCTGAACTTGCCTTTGTGGATGAAGACGATATCGTCTACTTCATACAATGGGGTCAA
GTCCACATTGTAATTTCTATTACATCCTTGCTCTGCGACTTGCTCCTCTTTGGAATCCCCGTAGCAATGTTGCGA
ATTCTCAAAACGATGCCTAAGAAGCAAAAAGTTCAACTTGCCTGCATCCTCCTACCAGGCATTGCGTGAGTACAC
ACGTCACTTCCTTGTGCAGATAAAGGGCTGAGCTGACCTTACTGCATGACACAGCGTAGTTGGCATCTCGATAAC
CCGACTTGTGTTTCAGATCAGGGTCGCATGTGAGTACCAAACCCAAACGTTTTGCATTGCGACACTGGGCTGACG
TGCGTTGTCTGAAGTCGGGGATGGTACTGAACATCACCCTGATTTCTCTTTTCTATTCTTTCTTGCGGTCGAGGC
TGCAGAGATAAGCGCGACGCTGATAGCTCTATCGATCCCGGGCCTTAAGCCGCTGCTCGACAAGTTCATCCTCCG
AAAGGACAACCTGGCCGACGCTGCTCACTCCAACGATGGGAACAGTAGGCTGCGCGCCCTGAGGCCAGTATCGGA
CGGCAGCACGCTCTCGATCGATAAGACGGGCCACTACGAAACGGAGGTCAGCACGTTCTCGAAGCAGGACACGAT
GCGTAATAAAATCCGGGTCACGACGGACGTCAAGGTCCAAGATGAGAAGTACCAGCCTTGGGAACCAGGGTACAT
ATAA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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