© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6488 |
| Gene name | |
| Location | Contig_334:10316..11670 |
| Strand | - |
| Gene length (bp) | 1354 |
| Transcript length (bp) | 1167 |
| Coding sequence length (bp) | 1167 |
| Protein length (aa) | 389 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 37 | 59 | 22 |
| 2 | 72 | 94 | 22 |
| 3 | 123 | 145 | 22 |
| 4 | 152 | 174 | 22 |
| 5 | 206 | 228 | 22 |
| 6 | 241 | 263 | 22 |
| 7 | 278 | 300 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6488 MGWSLDSQIDEAVASGRVPTDVPPDVIEGLHESRDEDGIIGIIVVAAVAALVVTLRMLSRMFIVKRVGSDDVLAL LSLVAFIPFVALAIRQIQLGGGRDYLFEELVMDEATQATLQTYDTVSHIAYITALTLCRLSGILFYYRICRLRHE FLIGLRFCFGIVVVAYLMQVSLIAFHSMPVSALWTPELAFVDEDDIVYFIQWGQVHIVISITSLLCDLLLFGIPV AMLRILKTMPKKQKVQLACILLPGIAVVGISITRLVFQIRVAFGDGTEHHPDFSFLFFLAVEAAEISATLIALSI PGLKPLLDKFILRKDNLADAAHSNDGNSRLRALRPVSDGSTLSIDKTGHYETEVSTFSKQDTMRNKIRVTTDVKV QDEKYQPWEPGYI* |
| Coding | >Hirsu2|6488 ATGGGCTGGTCCCTAGACTCCCAGATCGATGAAGCTGTTGCTTCTGGTCGTGTCCCCACGGACGTACCGCCGGAC GTGATCGAAGGGCTCCATGAGAGCCGGGACGAGGACGGCATCATCGGCATCATCGTCGTCGCCGCCGTCGCCGCC CTGGTCGTCACTCTCCGAATGCTCTCCAGAATGTTCATCGTCAAGCGTGTCGGATCCGACGATGTCCTCGCCCTC CTGTCGCTGGTGGCATTCATTCCCTTTGTCGCCCTTGCCATTCGGCAGATCCAACTCGGTGGCGGAAGAGATTAC CTCTTTGAGGAACTCGTCATGGATGAGGCAACACAGGCCACGCTTCAGACCTACGACACCGTCTCGCACATTGCC TACATCACGGCGCTCACACTCTGCCGTCTGTCGGGTATTCTATTTTACTACCGCATCTGTCGCCTCCGGCACGAG TTTCTCATCGGCCTCAGGTTTTGCTTCGGCATCGTCGTCGTCGCCTACCTAATGCAGGTGTCGCTCATCGCCTTC CACTCCATGCCCGTGAGCGCCCTCTGGACTCCTGAACTTGCCTTTGTGGATGAAGACGATATCGTCTACTTCATA CAATGGGGTCAAGTCCACATTGTAATTTCTATTACATCCTTGCTCTGCGACTTGCTCCTCTTTGGAATCCCCGTA GCAATGTTGCGAATTCTCAAAACGATGCCTAAGAAGCAAAAAGTTCAACTTGCCTGCATCCTCCTACCAGGCATT GCCGTAGTTGGCATCTCGATAACCCGACTTGTGTTTCAGATCAGGGTCGCATTCGGGGATGGTACTGAACATCAC CCTGATTTCTCTTTTCTATTCTTTCTTGCGGTCGAGGCTGCAGAGATAAGCGCGACGCTGATAGCTCTATCGATC CCGGGCCTTAAGCCGCTGCTCGACAAGTTCATCCTCCGAAAGGACAACCTGGCCGACGCTGCTCACTCCAACGAT GGGAACAGTAGGCTGCGCGCCCTGAGGCCAGTATCGGACGGCAGCACGCTCTCGATCGATAAGACGGGCCACTAC GAAACGGAGGTCAGCACGTTCTCGAAGCAGGACACGATGCGTAATAAAATCCGGGTCACGACGGACGTCAAGGTC CAAGATGAGAAGTACCAGCCTTGGGAACCAGGGTACATATAA |
| Transcript | >Hirsu2|6488 ATGGGCTGGTCCCTAGACTCCCAGATCGATGAAGCTGTTGCTTCTGGTCGTGTCCCCACGGACGTACCGCCGGAC GTGATCGAAGGGCTCCATGAGAGCCGGGACGAGGACGGCATCATCGGCATCATCGTCGTCGCCGCCGTCGCCGCC CTGGTCGTCACTCTCCGAATGCTCTCCAGAATGTTCATCGTCAAGCGTGTCGGATCCGACGATGTCCTCGCCCTC CTGTCGCTGGTGGCATTCATTCCCTTTGTCGCCCTTGCCATTCGGCAGATCCAACTCGGTGGCGGAAGAGATTAC CTCTTTGAGGAACTCGTCATGGATGAGGCAACACAGGCCACGCTTCAGACCTACGACACCGTCTCGCACATTGCC TACATCACGGCGCTCACACTCTGCCGTCTGTCGGGTATTCTATTTTACTACCGCATCTGTCGCCTCCGGCACGAG TTTCTCATCGGCCTCAGGTTTTGCTTCGGCATCGTCGTCGTCGCCTACCTAATGCAGGTGTCGCTCATCGCCTTC CACTCCATGCCCGTGAGCGCCCTCTGGACTCCTGAACTTGCCTTTGTGGATGAAGACGATATCGTCTACTTCATA CAATGGGGTCAAGTCCACATTGTAATTTCTATTACATCCTTGCTCTGCGACTTGCTCCTCTTTGGAATCCCCGTA GCAATGTTGCGAATTCTCAAAACGATGCCTAAGAAGCAAAAAGTTCAACTTGCCTGCATCCTCCTACCAGGCATT GCCGTAGTTGGCATCTCGATAACCCGACTTGTGTTTCAGATCAGGGTCGCATTCGGGGATGGTACTGAACATCAC CCTGATTTCTCTTTTCTATTCTTTCTTGCGGTCGAGGCTGCAGAGATAAGCGCGACGCTGATAGCTCTATCGATC CCGGGCCTTAAGCCGCTGCTCGACAAGTTCATCCTCCGAAAGGACAACCTGGCCGACGCTGCTCACTCCAACGAT GGGAACAGTAGGCTGCGCGCCCTGAGGCCAGTATCGGACGGCAGCACGCTCTCGATCGATAAGACGGGCCACTAC GAAACGGAGGTCAGCACGTTCTCGAAGCAGGACACGATGCGTAATAAAATCCGGGTCACGACGGACGTCAAGGTC CAAGATGAGAAGTACCAGCCTTGGGAACCAGGGTACATATAA |
| Gene | >Hirsu2|6488 ATGGGCTGGTCCCTAGACTCCCAGATCGATGAAGCTGTTGCTTCTGGTCGTGTCCCCACGGACGTACCGCCGGAC GTGATCGAAGGGCTCCATGAGAGCCGGGACGAGGACGGCATCATCGGCATCATCGTCGTCGCCGCCGTCGCCGCC CTGGTCGTCACTCTCCGAATGCTCTCCAGAATGTTCATCGTCAAGCGTGTCGGATCCGACGATGTCCTCGCCCTC CTGTCGCTGGTGAGCCCTCTCTCACCGAGTACGAAGCGCCCTGGCCTCGGTGCTCACATGATCTTTTGAAAGGTG GCATTCATTCCCTTTGTCGCCCTTGCCATTCGGCAGATCCAACTCGGTGGCGGAAGAGATTACCTCTTTGAGGAA CTCGTCATGGATGAGGCAACACAGGCCACGCTTCAGACCTACGACACCGTCTCGCACATTGCCTACATCACGGCG CTCACACTCTGCCGTCTGTCGGGTATTCTATTTTACTACCGCATCTGTCGCCTCCGGCACGAGTTTCTCATCGGC CTCAGGTTTTGCTTCGGCATCGTCGTCGTCGCCTACCTAATGCAGGTGTCGCTCATCGCCTTCCACTCCATGCCC GTGAGCGCCCTCTGGACTCCTGAACTTGCCTTTGTGGATGAAGACGATATCGTCTACTTCATACAATGGGGTCAA GTCCACATTGTAATTTCTATTACATCCTTGCTCTGCGACTTGCTCCTCTTTGGAATCCCCGTAGCAATGTTGCGA ATTCTCAAAACGATGCCTAAGAAGCAAAAAGTTCAACTTGCCTGCATCCTCCTACCAGGCATTGCGTGAGTACAC ACGTCACTTCCTTGTGCAGATAAAGGGCTGAGCTGACCTTACTGCATGACACAGCGTAGTTGGCATCTCGATAAC CCGACTTGTGTTTCAGATCAGGGTCGCATGTGAGTACCAAACCCAAACGTTTTGCATTGCGACACTGGGCTGACG TGCGTTGTCTGAAGTCGGGGATGGTACTGAACATCACCCTGATTTCTCTTTTCTATTCTTTCTTGCGGTCGAGGC TGCAGAGATAAGCGCGACGCTGATAGCTCTATCGATCCCGGGCCTTAAGCCGCTGCTCGACAAGTTCATCCTCCG AAAGGACAACCTGGCCGACGCTGCTCACTCCAACGATGGGAACAGTAGGCTGCGCGCCCTGAGGCCAGTATCGGA CGGCAGCACGCTCTCGATCGATAAGACGGGCCACTACGAAACGGAGGTCAGCACGTTCTCGAAGCAGGACACGAT GCGTAATAAAATCCGGGTCACGACGGACGTCAAGGTCCAAGATGAGAAGTACCAGCCTTGGGAACCAGGGTACAT ATAA |