Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6486
Gene name
LocationContig_334:3297..4144
Strand-
Gene length (bp)847
Transcript length (bp)792
Coding sequence length (bp)792
Protein length (aa) 264

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09056 Phospholip_A2_3 Prokaryotic phospholipase A2 2.1E-25 45 156

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4B0M5|A2001_ARTBC Uncharacterized secreted protein ARB_02001 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02001 PE=1 SV=1 41 157 3.0E-13

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1708 0.055 0.8901 0.105 0.073 0.0863 0.4665 0.4602 0.3759 0.0067

SignalP

SignalP signal predicted Location Score
Yes 1 - 25 0.999712

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup191
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2378
Ophiocordyceps australis map64 (Brazil) OphauB2|188
Ophiocordyceps australis map64 (Brazil) OphauB2|3828
Ophiocordyceps camponoti-floridani Ophcf2|04536
Ophiocordyceps camponoti-rufipedis Ophun1|6933
Ophiocordyceps kimflemingae Ophio5|2461
Ophiocordyceps subramaniannii Hirsu2|593
Ophiocordyceps subramaniannii Hirsu2|6486 (this protein)
Ophiocordyceps subramaniannii Hirsu2|9027

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6486
MRLLADVSSLLGLLTVLVLFDSARALHQEIYPEMSWSKQQVVNLMCFKLDLRSFHELRDGREKIETFSWINRLNF
DWTTNGCTAVPDKPFGNNFRPTCVRHDFCYTNLKKNGVFFNHVRKRVDDVFESDLNKQCNGLGFFCNRAKNVYYA
GVRAFGELGDTEDFNPYYIIKDGFCEPFQGDLDQPGQKLMIAARANIKGHALPKEACLELSWYRKYVQKPGELDR
CGMVAERGDIEAIEKERGETFGPERDWTVALGRVRKFW*
Coding >Hirsu2|6486
ATGAGGCTGCTTGCAGACGTGAGCTCGCTACTTGGTCTCCTTACGGTGCTCGTCCTCTTCGACAGCGCTCGAGCC
CTACATCAGGAAATTTATCCAGAAATGTCATGGAGCAAGCAGCAGGTTGTGAACCTTATGTGTTTTAAACTAGAC
TTGAGATCCTTCCACGAGTTAAGGGATGGCAGGGAGAAGATAGAGACTTTTAGCTGGATCAATAGGCTCAATTTC
GACTGGACTACTAACGGGTGCACGGCCGTGCCGGACAAACCTTTCGGCAATAACTTCAGGCCTACCTGTGTGCGC
CACGACTTTTGCTATACCAACTTGAAGAAGAATGGCGTATTTTTCAATCACGTGCGGAAGAGAGTGGACGACGTG
TTCGAATCGGACCTGAACAAGCAGTGCAATGGACTCGGCTTCTTCTGCAACAGAGCAAAGAATGTATACTACGCT
GGTGTGAGGGCTTTTGGTGAGCTGGGAGACACGGAGGACTTCAACCCATACTACATCATTAAGGATGGGTTTTGC
GAACCTTTTCAGGGAGATCTGGACCAGCCTGGCCAGAAATTGATGATAGCGGCCCGAGCAAACATCAAAGGCCAT
GCGCTGCCGAAAGAGGCCTGCTTGGAGCTAAGTTGGTATCGAAAGTACGTTCAGAAGCCGGGGGAACTGGACAGA
TGCGGGATGGTAGCGGAGAGGGGTGATATAGAGGCGATAGAGAAGGAAAGGGGAGAAACGTTTGGACCGGAGAGA
GACTGGACGGTTGCTTTGGGCCGCGTCCGAAAGTTTTGGTAG
Transcript >Hirsu2|6486
ATGAGGCTGCTTGCAGACGTGAGCTCGCTACTTGGTCTCCTTACGGTGCTCGTCCTCTTCGACAGCGCTCGAGCC
CTACATCAGGAAATTTATCCAGAAATGTCATGGAGCAAGCAGCAGGTTGTGAACCTTATGTGTTTTAAACTAGAC
TTGAGATCCTTCCACGAGTTAAGGGATGGCAGGGAGAAGATAGAGACTTTTAGCTGGATCAATAGGCTCAATTTC
GACTGGACTACTAACGGGTGCACGGCCGTGCCGGACAAACCTTTCGGCAATAACTTCAGGCCTACCTGTGTGCGC
CACGACTTTTGCTATACCAACTTGAAGAAGAATGGCGTATTTTTCAATCACGTGCGGAAGAGAGTGGACGACGTG
TTCGAATCGGACCTGAACAAGCAGTGCAATGGACTCGGCTTCTTCTGCAACAGAGCAAAGAATGTATACTACGCT
GGTGTGAGGGCTTTTGGTGAGCTGGGAGACACGGAGGACTTCAACCCATACTACATCATTAAGGATGGGTTTTGC
GAACCTTTTCAGGGAGATCTGGACCAGCCTGGCCAGAAATTGATGATAGCGGCCCGAGCAAACATCAAAGGCCAT
GCGCTGCCGAAAGAGGCCTGCTTGGAGCTAAGTTGGTATCGAAAGTACGTTCAGAAGCCGGGGGAACTGGACAGA
TGCGGGATGGTAGCGGAGAGGGGTGATATAGAGGCGATAGAGAAGGAAAGGGGAGAAACGTTTGGACCGGAGAGA
GACTGGACGGTTGCTTTGGGCCGCGTCCGAAAGTTTTGGTAG
Gene >Hirsu2|6486
ATGAGGCTGCTTGCAGACGTGAGCTCGCTACTTGGTCTCCTTACGGTGCTCGTCCTCTTCGACAGCGCTCGAGCC
CTACATCAGGAAATTTATCCAGAAATGTCATGGAGCAAGCAGCAGGTTGTGAACCTTATGTGTTTTAAACTAGAC
TTGAGATCCTTCCACGAGTTAAGGGATGGCAGGGAGAAGATAGAGACTTTTAGCTGGATCAATAGGCTCAATTTC
GACTGGACTACTAACGGGTGCACGGCCGTGCCGGACAAACCTTTCGGCAATAACTTCAGGCCTACCTGTGTGCGC
CACGACTTTTGCTATACCAACTTGAAGAAGAATGGCGTATTTTTCAATCACGTGCGGAAGAGAGTGGACGACGTG
TTCGAATCGGAGTAAGCTGAACCTATCGCTGTATAAAGAGGAGAGAAAACTGACCGGCAAGCGCAGCCTGAACAA
GCAGTGCAATGGACTCGGCTTCTTCTGCAACAGAGCAAAGAATGTATACTACGCTGGTGTGAGGGCTTTTGGTGA
GCTGGGAGACACGGAGGACTTCAACCCATACTACATCATTAAGGATGGGTTTTGCGAACCTTTTCAGGGAGATCT
GGACCAGCCTGGCCAGAAATTGATGATAGCGGCCCGAGCAAACATCAAAGGCCATGCGCTGCCGAAAGAGGCCTG
CTTGGAGCTAAGTTGGTATCGAAAGTACGTTCAGAAGCCGGGGGAACTGGACAGATGCGGGATGGTAGCGGAGAG
GGGTGATATAGAGGCGATAGAGAAGGAAAGGGGAGAAACGTTTGGACCGGAGAGAGACTGGACGGTTGCTTTGGG
CCGCGTCCGAAAGTTTTGGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail