Protein ID | Hirsu2|6481 |
Gene name | |
Location | Contig_3331:256..976 |
Strand | - |
Gene length (bp) | 720 |
Transcript length (bp) | 720 |
Coding sequence length (bp) | 720 |
Protein length (aa) | 240 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00083 | Sugar_tr | Sugar (and other) transporter | 8.3E-07 | 6 | 182 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P36035|JEN1_YEAST | Carboxylic acid transporter protein homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=JEN1 PE=1 SV=1 | 1 | 239 | 2.0E-40 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016021 | integral component of membrane | Yes |
GO:0055085 | transmembrane transport | Yes |
GO:0022857 | transmembrane transporter activity | Yes |
GO:0031224 | intrinsic component of membrane | No |
GO:0009987 | cellular process | No |
GO:0110165 | cellular anatomical entity | No |
GO:0051179 | localization | No |
GO:0005215 | transporter activity | No |
GO:0005575 | cellular_component | No |
GO:0008150 | biological_process | No |
GO:0051234 | establishment of localization | No |
GO:0003674 | molecular_function | No |
GO:0006810 | transport | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 59 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 30 | 52 | 22 |
2 | 59 | 78 | 19 |
3 | 161 | 183 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6481 MAGFNFMSHGSQDLYPTMLESQLGFGPTRVTLTQVVSNLGAMLGGTLVGFGSQSVGRRLSILVCCVAGGALLYPY TFVGSDAVMAAAFFQQFCVQGAWGVVPVHLMELSPGAFRTFVVGTSYQLGNLASSASSTIEARLGEQFPLPAPPG GEAAAGERFEYGKVICIFMACVYAYVIALTLLGPEHLHRKLGVAHDADARAAVGSDAVDQAAARPELRGLDLDDA DEEKKMTSAKTVEG* |
Coding | >Hirsu2|6481 ATGGCCGGCTTCAACTTCATGAGCCACGGCAGCCAGGACCTGTACCCGACCATGCTGGAGAGCCAGCTGGGCTTC GGCCCGACGCGCGTGACGCTGACGCAGGTCGTCTCCAACCTGGGCGCCATGCTGGGCGGCACCCTCGTCGGCTTC GGCAGCCAGTCGGTCGGGCGCCGGCTCAGCATCCTGGTCTGCTGCGTCGCCGGCGGCGCCCTGCTGTACCCCTAC ACCTTCGTCGGCTCCGACGCCGTCATGGCCGCCGCCTTCTTCCAGCAGTTCTGCGTCCAGGGCGCCTGGGGCGTC GTGCCCGTCCACCTGATGGAGCTGTCGCCGGGCGCCTTCCGCACCTTCGTCGTCGGCACCTCGTACCAGCTCGGC AACCTGGCCTCGTCCGCCTCGTCCACCATCGAGGCCCGCCTCGGCGAGCAGTTCCCGCTGCCGGCCCCGCCCGGC GGGGAGGCCGCCGCCGGCGAGCGCTTCGAGTACGGCAAGGTCATCTGCATCTTCATGGCCTGCGTCTACGCCTAC GTCATCGCCCTGACCCTCCTCGGGCCCGAGCACCTGCACCGCAAGCTCGGCGTCGCCCACGACGCCGACGCCCGC GCCGCCGTCGGCTCCGACGCCGTCGACCAAGCCGCCGCCCGCCCCGAGCTGCGCGGCCTGGACCTCGACGACGCC GACGAGGAGAAGAAGATGACGTCGGCCAAGACGGTCGAGGGATGA |
Transcript | >Hirsu2|6481 ATGGCCGGCTTCAACTTCATGAGCCACGGCAGCCAGGACCTGTACCCGACCATGCTGGAGAGCCAGCTGGGCTTC GGCCCGACGCGCGTGACGCTGACGCAGGTCGTCTCCAACCTGGGCGCCATGCTGGGCGGCACCCTCGTCGGCTTC GGCAGCCAGTCGGTCGGGCGCCGGCTCAGCATCCTGGTCTGCTGCGTCGCCGGCGGCGCCCTGCTGTACCCCTAC ACCTTCGTCGGCTCCGACGCCGTCATGGCCGCCGCCTTCTTCCAGCAGTTCTGCGTCCAGGGCGCCTGGGGCGTC GTGCCCGTCCACCTGATGGAGCTGTCGCCGGGCGCCTTCCGCACCTTCGTCGTCGGCACCTCGTACCAGCTCGGC AACCTGGCCTCGTCCGCCTCGTCCACCATCGAGGCCCGCCTCGGCGAGCAGTTCCCGCTGCCGGCCCCGCCCGGC GGGGAGGCCGCCGCCGGCGAGCGCTTCGAGTACGGCAAGGTCATCTGCATCTTCATGGCCTGCGTCTACGCCTAC GTCATCGCCCTGACCCTCCTCGGGCCCGAGCACCTGCACCGCAAGCTCGGCGTCGCCCACGACGCCGACGCCCGC GCCGCCGTCGGCTCCGACGCCGTCGACCAAGCCGCCGCCCGCCCCGAGCTGCGCGGCCTGGACCTCGACGACGCC GACGAGGAGAAGAAGATGACGTCGGCCAAGACGGTCGAGGGATGA |
Gene | >Hirsu2|6481 ATGGCCGGCTTCAACTTCATGAGCCACGGCAGCCAGGACCTGTACCCGACCATGCTGGAGAGCCAGCTGGGCTTC GGCCCGACGCGCGTGACGCTGACGCAGGTCGTCTCCAACCTGGGCGCCATGCTGGGCGGCACCCTCGTCGGCTTC GGCAGCCAGTCGGTCGGGCGCCGGCTCAGCATCCTGGTCTGCTGCGTCGCCGGCGGCGCCCTGCTGTACCCCTAC ACCTTCGTCGGCTCCGACGCCGTCATGGCCGCCGCCTTCTTCCAGCAGTTCTGCGTCCAGGGCGCCTGGGGCGTC GTGCCCGTCCACCTGATGGAGCTGTCGCCGGGCGCCTTCCGCACCTTCGTCGTCGGCACCTCGTACCAGCTCGGC AACCTGGCCTCGTCCGCCTCGTCCACCATCGAGGCCCGCCTCGGCGAGCAGTTCCCGCTGCCGGCCCCGCCCGGC GGGGAGGCCGCCGCCGGCGAGCGCTTCGAGTACGGCAAGGTCATCTGCATCTTCATGGCCTGCGTCTACGCCTAC GTCATCGCCCTGACCCTCCTCGGGCCCGAGCACCTGCACCGCAAGCTCGGCGTCGCCCACGACGCCGACGCCCGC GCCGCCGTCGGCTCCGACGCCGTCGACCAAGCCGCCGCCCGCCCCGAGCTGCGCGGCCTGGACCTCGACGACGCC GACGAGGAGAAGAAGATGACGTCGGCCAAGACGGTCGAGGGATGA |