Protein ID | Hirsu2|6477 |
Gene name | |
Location | Contig_333:13184..15474 |
Strand | + |
Gene length (bp) | 2290 |
Transcript length (bp) | 1548 |
Coding sequence length (bp) | 1548 |
Protein length (aa) | 516 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1554 | 0.1621 | 0.8804 | 0.2016 | 0.0768 | 0.2409 | 0.2034 | 0.3686 | 0.308 | 0.0203 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 27 | 0.99978 |
Orthofinder run ID | 4 |
Orthogroup | 104 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6477 MELTRWSSSLSFVLAAALVSWPAPATGEQVPYVDGLTEGQGFNTFLQTGCQHGAVQVTRPSGEQKTETDQAQVMY TAERISSYEKLVESIEVSAGATVKTLNAEGSVNARFLDRSEFESSFLTYLVKVDVRRQPTTAASYAFQWNQAKAP QQSYCDRFIGGFIEGGALYARVSIVTKDKTKHREVEQSAKAAFKVFSAGVEITQEAKSSFDKVQKNSEISIYLQY VGAPLGSGFKDEVREGDAAEILQLKNTADRFLDAAQSHAWKRYAMLEKYTNIPDFNGRFEPYDYSEATDRSWSVL TDFTKFLGVQKMIRQVPAARFVGGRGTRDEFDTRTSNILAKQRTWVTAVSGEPSEAKRKPTREDPAKLYEEVLSA VRSTPYIAQRLQPDGGPTTDIIDKKLHHRAKKLFDLQAFDFGDIPGTAALRFGKRPDQNRHTCVIGRAMSPGYDV LSELWVFEKAVPGVVNETVAVTAIPMDGSFELSLLPPGAHRLLARASRLFGRQWAAFFEFYVKSA* |
Coding | >Hirsu2|6477 ATGGAGCTCACTCGCTGGAGCTCGAGTCTCTCCTTTGTGCTGGCAGCAGCATTGGTCAGTTGGCCTGCGCCGGCG ACGGGCGAACAGGTTCCCTATGTCGATGGCCTCACCGAAGGACAAGGTTTCAACACCTTTCTCCAGACCGGCTGC CAGCACGGTGCTGTGCAGGTTACGAGGCCCTCGGGCGAACAGAAAACCGAGACGGATCAGGCCCAGGTGATGTAC ACGGCGGAGAGGATTTCAAGCTACGAGAAGCTCGTCGAGTCCATCGAGGTCAGCGCCGGAGCGACGGTGAAGACG TTGAACGCTGAGGGGAGCGTCAACGCCCGCTTCCTCGACCGGAGCGAGTTCGAGTCGAGCTTCTTAACGTACCTG GTCAAGGTCGACGTGCGGAGGCAGCCGACGACGGCGGCAAGCTACGCGTTCCAGTGGAATCAAGCAAAGGCGCCG CAGCAGTCCTACTGCGACCGGTTCATCGGCGGCTTCATCGAGGGCGGAGCGCTGTATGCGCGCGTGTCCATCGTC ACCAAGGACAAGACCAAGCACCGCGAGGTCGAGCAGTCCGCCAAGGCAGCCTTCAAGGTCTTCTCGGCCGGCGTC GAGATCACGCAGGAGGCCAAGTCGAGCTTCGACAAGGTGCAGAAGAACTCGGAGATCAGCATCTACCTGCAGTAC GTCGGCGCCCCGCTCGGGTCGGGCTTCAAGGACGAGGTCCGCGAGGGCGATGCGGCCGAGATTCTGCAGCTGAAG AACACGGCCGACCGGTTCCTCGACGCGGCGCAGAGCCACGCGTGGAAGCGATATGCCATGCTGGAGAAGTACACC AACATCCCCGACTTCAACGGCCGCTTTGAGCCGTACGACTATTCTGAGGCCACGGACCGGAGCTGGTCCGTCTTG ACCGACTTCACCAAGTTCCTCGGCGTCCAGAAGATGATTCGCCAGGTGCCCGCCGCCCGGTTTGTGGGCGGCAGA GGGACCAGGGACGAGTTTGATACGCGGACGAGCAACATCCTTGCGAAGCAGAGGACTTGGGTTACCGCCGTCAGC GGAGAGCCGTCGGAAGCCAAGCGCAAGCCGACGCGAGAAGACCCGGCGAAGCTCTACGAGGAAGTCTTGTCCGCC GTCCGGTCGACGCCCTACATCGCGCAACGCCTGCAACCCGACGGCGGCCCTACCACGGACATCATCGACAAGAAG CTGCACCACCGGGCCAAGAAGCTCTTCGACCTGCAGGCCTTCGACTTCGGCGACATCCCCGGCACGGCCGCCCTG CGGTTCGGCAAGAGGCCGGACCAGAACCGGCACACGTGCGTCATCGGCCGCGCCATGAGCCCGGGCTACGACGTC CTCAGCGAGCTGTGGGTGTTCGAGAAGGCGGTGCCGGGCGTCGTCAACGAGACAGTGGCCGTGACGGCCATCCCC ATGGACGGCAGCTTCGAGCTCAGCCTCCTCCCGCCGGGCGCGCACCGGCTCTTGGCGCGTGCCTCGCGCCTGTTC GGGAGGCAGTGGGCGGCGTTTTTCGAGTTTTACGTCAAGAGTGCCTGA |
Transcript | >Hirsu2|6477 ATGGAGCTCACTCGCTGGAGCTCGAGTCTCTCCTTTGTGCTGGCAGCAGCATTGGTCAGTTGGCCTGCGCCGGCG ACGGGCGAACAGGTTCCCTATGTCGATGGCCTCACCGAAGGACAAGGTTTCAACACCTTTCTCCAGACCGGCTGC CAGCACGGTGCTGTGCAGGTTACGAGGCCCTCGGGCGAACAGAAAACCGAGACGGATCAGGCCCAGGTGATGTAC ACGGCGGAGAGGATTTCAAGCTACGAGAAGCTCGTCGAGTCCATCGAGGTCAGCGCCGGAGCGACGGTGAAGACG TTGAACGCTGAGGGGAGCGTCAACGCCCGCTTCCTCGACCGGAGCGAGTTCGAGTCGAGCTTCTTAACGTACCTG GTCAAGGTCGACGTGCGGAGGCAGCCGACGACGGCGGCAAGCTACGCGTTCCAGTGGAATCAAGCAAAGGCGCCG CAGCAGTCCTACTGCGACCGGTTCATCGGCGGCTTCATCGAGGGCGGAGCGCTGTATGCGCGCGTGTCCATCGTC ACCAAGGACAAGACCAAGCACCGCGAGGTCGAGCAGTCCGCCAAGGCAGCCTTCAAGGTCTTCTCGGCCGGCGTC GAGATCACGCAGGAGGCCAAGTCGAGCTTCGACAAGGTGCAGAAGAACTCGGAGATCAGCATCTACCTGCAGTAC GTCGGCGCCCCGCTCGGGTCGGGCTTCAAGGACGAGGTCCGCGAGGGCGATGCGGCCGAGATTCTGCAGCTGAAG AACACGGCCGACCGGTTCCTCGACGCGGCGCAGAGCCACGCGTGGAAGCGATATGCCATGCTGGAGAAGTACACC AACATCCCCGACTTCAACGGCCGCTTTGAGCCGTACGACTATTCTGAGGCCACGGACCGGAGCTGGTCCGTCTTG ACCGACTTCACCAAGTTCCTCGGCGTCCAGAAGATGATTCGCCAGGTGCCCGCCGCCCGGTTTGTGGGCGGCAGA GGGACCAGGGACGAGTTTGATACGCGGACGAGCAACATCCTTGCGAAGCAGAGGACTTGGGTTACCGCCGTCAGC GGAGAGCCGTCGGAAGCCAAGCGCAAGCCGACGCGAGAAGACCCGGCGAAGCTCTACGAGGAAGTCTTGTCCGCC GTCCGGTCGACGCCCTACATCGCGCAACGCCTGCAACCCGACGGCGGCCCTACCACGGACATCATCGACAAGAAG CTGCACCACCGGGCCAAGAAGCTCTTCGACCTGCAGGCCTTCGACTTCGGCGACATCCCCGGCACGGCCGCCCTG CGGTTCGGCAAGAGGCCGGACCAGAACCGGCACACGTGCGTCATCGGCCGCGCCATGAGCCCGGGCTACGACGTC CTCAGCGAGCTGTGGGTGTTCGAGAAGGCGGTGCCGGGCGTCGTCAACGAGACAGTGGCCGTGACGGCCATCCCC ATGGACGGCAGCTTCGAGCTCAGCCTCCTCCCGCCGGGCGCGCACCGGCTCTTGGCGCGTGCCTCGCGCCTGTTC GGGAGGCAGTGGGCGGCGTTTTTCGAGTTTTACGTCAAGAGTGCCTGA |
Gene | >Hirsu2|6477 ATGGAGCTCACTCGCTGGAGCTCGAGTCTCTCCTTTGTGCTGGCAGCAGCATTGGTCAGTTGGCCTGCGCCGGCG ACGGGCGAACAGGTTCCCTATGTCGATGGCCTCACCGAAGGACAAGGGTAGGCTATCCACCTCCAGCCCTCACCA AGATCCGGACGCCGTCTATGCCCTTATATTGTCGAAGCCTGACGGCCCTGACCTTCCGACCGCTTCTAGTTTCAA CACCTTTCTCCAGACCGGCTGCCAGCACGGTGCTGTGCAGGTTACGAGGCCCTCGGGCGAACAGAAAACCGAGAC GGATCAGGCCCAGGTGATGTACACGGCGGAGAGGATTTCAAGCTACGAGTAGGACAGCCCTCTCCCCATCCATCA TTTCCCCTATACCTGCTTCGACTCTACATCTGTATTCGTCTGTCAAGCTCCTCCGGCTGACGCCACGGCGCAGGA AGCTCGTCGAGTCCATCGAGGTCAGCGCCGGAGCGACGGTGAAGACGTTGAACGCTGAGGGGAGCGTCAACGCCC GCTTCCTCGACCGGAGCGAGGTCTGTATCTTCGCTCTGCGGCGCAGGGGCCCCGGCTGATGCCAGAGCAGTTCGA GTCGAGCTTCTTAACGTACCTGGTCAAGGTCGACGTGCGGAGGCAGCCGACGACGGCGGCAAGCTACGCGTTCCA GTGGAATCAAGCAAAGGCGCCGCAGCAGTCCTACTGCGACCGGTTCATCGGCGGTAAGGGACCGGCACTCCCCGA TCTCGTGGCTGGGCCTGACACGCGCGTCCCCCAGGCTTCATCGAGGGCGGAGCGCTGTATGCGCGCGTGTCCATC GTCACCAAGGACAAGACCAAGCACCGCGAGGTCGAGCAGTCGTGAGTGATGCACGACACATGCGGCTTTCTCCCG TCCGCCCGCTGAGACGCCGATGCAGCGCCAAGGCAGCCTTCAAGGTCTTCTCGGCCGGCGTCGAGATCACGCAGG AGGCCAAGTCGAGCTTCGACAAGGTGCAGAAGAACTCGGAGATCAGCATCTACCTGCAGTACGTCGGCGCCCCGC TCGGGTCGGGCTTCAAGGACGAGGTCCGCGAGGGCGATGCGGCCGAGATTCTGCAGCTGAAGAACACGGCCGACC GGTTCCTCGACGCGGCGCAGAGCCACGCGTGGAAGCGATAGTGAGCGTCGCCCTCGGACCAGACCTGTTCCTCGA CGGAAGCTGACCGGTTCGGCCCACGTCCAGTGCCATGCTGGAGAAGTACACCAACATCCCCGACTTCAACGGCCG CTTTGAGCCGTACGACTATTCTGAGGCCACGGACCGGGTAGGCACACGGACGGCCGCGAGCTCCTCGGTGCAGCG CTGACCCGGAGACGTGCACAGAGCTGGTCCGTCTTGACCGACTTCACCAAGTTCCTCGGCGTCCAGAAGATGATT CGCCAGGGTACGCCGCCTACATGTTTTCTTAGAGCTCGTCGTTGCTCGCCCTGCTGACAAGTCTGCTTCGCAAGT GCCCGCCGCCCGGTTTGTGGGCGGCAGAGGGACCAGGGACGAGTTTGATACGCGGACGAGCAACATCCTTGCGAA GCAGAGGACTTGGGTAAGTGTGCCGGCAAGCCATCGGAGAGGAACGCGGCCGCAACAGGCTTGCTGACCGACGAC AACCCAGGTTACCGCCGTCAGCGGAGAGCCGTCGGAAGCCAAGCGCAAGCCGACGCGAGAAGACCCGGCGAAGCT CTACGAGGAAGTCTTGGTAGGCAGCGTCCCAGGGAACGACGTGAAACGGCGCTGATCGTGCGCGGAACCAGTCCG CCGTCCGGTCGACGCCCTACATCGCGCAACGCCTGCAACCCGACGGCGGCCCTACCACGGACAGTGAGAAACCCG GACAAAGCCCGATCTAGACCAGGAGAACAGCAACTGACGCGAGCACCCCACAGTCATCGACAAGAAGCTGCACCA CCGGGCCAAGAAGCTCTTCGACCTGCAGGCCTTCGACTTCGGCGACATCCCCGGCACGGCCGCCCTGCGGTTCGG CAAGAGGCCGGACCAGAACCGGCACACGTGCGTCATCGGCCGCGCCATGAGCCCGGGCTACGACGTCCTCAGCGA GCTGTGGGTGTTCGAGAAGGCGGTGCCGGGCGTCGTCAACGAGACAGTGGCCGTGACGGCCATCCCCATGGACGG CAGCTTCGAGCTCAGCCTCCTCCCGCCGGGCGCGCACCGGCTCTTGGCGCGTGCCTCGCGCCTGTTCGGGAGGCA GTGGGCGGCGTTTTTCGAGTTTTACGTCAAGAGTGCCTGA |