Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6469
Gene name
LocationContig_3321:498..1056
Strand-
Gene length (bp)558
Transcript length (bp)366
Coding sequence length (bp)366
Protein length (aa) 122

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q92341|STR3_SCHPO Siderophore iron transporter 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=str3 PE=1 SV=1 25 116 4.0E-10

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.5

Transmembrane Domains

Domain # Start End Length
1 45 67 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6469
MTARPRKASGRRRPRHAGADRTEIGVSRVEAFNKVLYQSGRSGKVLLWLLGVSIGLTMFAYALDQGITSTIFTTM
ASSTFGKHSALAAVGTASQIIRAISKPFIGKLADITSRPTTRASTC*
Coding >Hirsu2|6469
ATGACGGCAAGGCCGAGGAAGGCCTCCGGGCGGCGGCGGCCTCGTCACGCCGGCGCGGACCGGACGGAGATTGGC
GTCAGCCGGGTCGAGGCCTTCAACAAGGTGCTGTACCAGTCGGGCCGGTCCGGCAAGGTGCTGCTGTGGCTGCTG
GGCGTGTCAATCGGCCTGACCATGTTCGCGTACGCGCTGGACCAGGGCATCACGTCGACCATCTTCACGACCATG
GCCAGCTCGACGTTCGGCAAGCACAGCGCGCTGGCGGCGGTCGGCACCGCCAGCCAGATCATCCGGGCCATCAGC
AAGCCCTTCATCGGCAAGCTGGCCGACATCACGTCGCGGCCGACGACTCGGGCCTCGACCTGCTGA
Transcript >Hirsu2|6469
ATGACGGCAAGGCCGAGGAAGGCCTCCGGGCGGCGGCGGCCTCGTCACGCCGGCGCGGACCGGACGGAGATTGGC
GTCAGCCGGGTCGAGGCCTTCAACAAGGTGCTGTACCAGTCGGGCCGGTCCGGCAAGGTGCTGCTGTGGCTGCTG
GGCGTGTCAATCGGCCTGACCATGTTCGCGTACGCGCTGGACCAGGGCATCACGTCGACCATCTTCACGACCATG
GCCAGCTCGACGTTCGGCAAGCACAGCGCGCTGGCGGCGGTCGGCACCGCCAGCCAGATCATCCGGGCCATCAGC
AAGCCCTTCATCGGCAAGCTGGCCGACATCACGTCGCGGCCGACGACTCGGGCCTCGACCTGCTGA
Gene >Hirsu2|6469
ATGACGGCAAGGCCGAGGAAGGCCTCCGGGCGGCGGCGGCCTCGTCGTCGACGGTGCCGTCCAAGCGGGACTCGG
TCGTCGGGGACGGCTCGGGCGGCGCGGCGGCGGCGGCGGCGGCGGCGGCCGGAGCAGACGCCGGCGCGGACCGGA
CGGAGATTGGCGTCAGCCGGGTCGAGGCCTTCAACAAGGTGCTGTACCAGTCGGGCCGGTCCGGCAAGGTGCTGC
TGTGGCTGCTGGGCGTGTCAATCGGCCTGACCATGTTCGCGTACGCGCTGGACCAGGGCATCACGTCGACCATCT
TCACGACCATGGCCAGCTCGACGTTCGGCAAGCACAGCGCGCTGGCGGCGGTCGGCACCGCCAGCCAGATCATCC
GGGCCATCAGCAAGCCCTTCATCGGCAAGCTGGCCGACATCACGTCGCGGCCGACGACGTACGTCGTCATCCTCG
TCTTCTACGTCGTCGGCTTCGCCGTCGCCGCCAGCTCCAGCACCTTCGCCGCCTACACCGTCGGCATCTGCTTCA
CCTCGGTCGGCAAGTCGGGCCTCGACCTGCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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