© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|6448 |
| Gene name | |
| Location | Contig_331:5178..6467 |
| Strand | - |
| Gene length (bp) | 1289 |
| Transcript length (bp) | 960 |
| Coding sequence length (bp) | 960 |
| Protein length (aa) | 320 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13489 | Methyltransf_23 | Methyltransferase domain | 3.2E-18 | 93 | 247 |
| PF13649 | Methyltransf_25 | Methyltransferase domain | 1.5E-07 | 99 | 187 |
| PF13847 | Methyltransf_31 | Methyltransferase domain | 3.2E-07 | 98 | 195 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 3.0E-05 | 100 | 190 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q72HI4|MENG_THET2 | Demethylmenaquinone methyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=menG PE=3 SV=1 | 90 | 194 | 2.0E-08 |
| sp|Q9RRT0|MENG_DEIRA | Demethylmenaquinone methyltransferase OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=menG PE=3 SV=1 | 95 | 194 | 6.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | Nuclear localization signal | 0.7054 | 0.3694 | 0.0676 | 0.1312 | 0.143 | 0.0098 | 0.2372 | 0.185 | 0.3686 | 0.005 |
| Orthofinder run ID | 4 |
| Orthogroup | 7009 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|3555 |
| Ophiocordyceps subramaniannii | Hirsu2|6448 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6448 MAQSNKTFHCHGRVLELDPAEGADYERPSATRSRSNGAAAPRGGDRDGGDGRDDDSRDGSYFLPTDSAEQDRLDE QHKLCLMLLDGKLGLAPVKAPRRVLDVATGTGIWAIQYAEQQPQAEVVGADLCVFQHESPAANCSFVRLDVEKDA WGLDHGFDYIHFRYVLSCFDDTRAVIGTAFDHLSPGGYVEFHDFVFSIVDLDGSFKGTALERWQAAVSRGAASVG RDLNKAVLYPGWCRDAGFVDVTETLFPLPFGTWVRGAAMKRLGEAAVRNIRALIGGSLRSFLELAGLSKSEMEEL IDEAMEDTRDPNIHYAGTV* |
| Coding | >Hirsu2|6448 ATGGCGCAGTCGAATAAGACGTTTCACTGCCACGGGCGTGTCCTGGAGCTCGACCCGGCCGAGGGGGCCGACTAC GAGAGGCCGAGCGCAACGAGGAGTCGCAGCAACGGGGCCGCGGCGCCGAGGGGCGGAGACCGCGACGGCGGCGAC GGCCGGGACGACGACAGCCGTGATGGATCGTACTTCCTGCCGACTGATTCGGCGGAACAAGACCGTCTGGATGAG CAGCACAAGCTGTGTCTCATGCTGCTGGACGGCAAGCTGGGTCTGGCGCCCGTCAAGGCACCTCGGCGTGTCCTC GACGTCGCGACAGGGACGGGCATCTGGGCCATCCAGTACGCGGAGCAGCAGCCGCAGGCCGAGGTCGTCGGCGCG GACCTGTGCGTCTTCCAGCACGAGTCGCCGGCGGCCAACTGCTCCTTCGTCCGGCTGGATGTCGAGAAGGACGCG TGGGGCTTGGATCACGGCTTCGACTACATCCACTTCCGCTACGTGCTCAGCTGCTTCGACGACACGCGGGCCGTG ATCGGCACGGCCTTTGACCACCTCAGCCCGGGCGGCTACGTCGAGTTCCACGACTTCGTCTTCTCCATCGTCGAC CTCGACGGCTCCTTCAAGGGCACCGCCCTCGAGCGCTGGCAGGCCGCCGTCAGCAGGGGCGCCGCCAGCGTCGGC CGCGACCTCAACAAGGCCGTCCTGTACCCCGGCTGGTGCCGCGACGCCGGCTTCGTCGACGTGACCGAGACGCTG TTCCCGCTGCCCTTCGGCACCTGGGTCAGGGGGGCGGCCATGAAGAGGTTGGGTGAAGCGGCGGTGCGCAACATC CGGGCGCTGATTGGCGGCTCGCTCAGGAGCTTCCTCGAGCTGGCCGGCCTGTCCAAGAGCGAGATGGAGGAGCTG ATCGACGAGGCCATGGAGGACACGCGAGACCCGAATATTCATTACGCCGGCACCGTGTGA |
| Transcript | >Hirsu2|6448 ATGGCGCAGTCGAATAAGACGTTTCACTGCCACGGGCGTGTCCTGGAGCTCGACCCGGCCGAGGGGGCCGACTAC GAGAGGCCGAGCGCAACGAGGAGTCGCAGCAACGGGGCCGCGGCGCCGAGGGGCGGAGACCGCGACGGCGGCGAC GGCCGGGACGACGACAGCCGTGATGGATCGTACTTCCTGCCGACTGATTCGGCGGAACAAGACCGTCTGGATGAG CAGCACAAGCTGTGTCTCATGCTGCTGGACGGCAAGCTGGGTCTGGCGCCCGTCAAGGCACCTCGGCGTGTCCTC GACGTCGCGACAGGGACGGGCATCTGGGCCATCCAGTACGCGGAGCAGCAGCCGCAGGCCGAGGTCGTCGGCGCG GACCTGTGCGTCTTCCAGCACGAGTCGCCGGCGGCCAACTGCTCCTTCGTCCGGCTGGATGTCGAGAAGGACGCG TGGGGCTTGGATCACGGCTTCGACTACATCCACTTCCGCTACGTGCTCAGCTGCTTCGACGACACGCGGGCCGTG ATCGGCACGGCCTTTGACCACCTCAGCCCGGGCGGCTACGTCGAGTTCCACGACTTCGTCTTCTCCATCGTCGAC CTCGACGGCTCCTTCAAGGGCACCGCCCTCGAGCGCTGGCAGGCCGCCGTCAGCAGGGGCGCCGCCAGCGTCGGC CGCGACCTCAACAAGGCCGTCCTGTACCCCGGCTGGTGCCGCGACGCCGGCTTCGTCGACGTGACCGAGACGCTG TTCCCGCTGCCCTTCGGCACCTGGGTCAGGGGGGCGGCCATGAAGAGGTTGGGTGAAGCGGCGGTGCGCAACATC CGGGCGCTGATTGGCGGCTCGCTCAGGAGCTTCCTCGAGCTGGCCGGCCTGTCCAAGAGCGAGATGGAGGAGCTG ATCGACGAGGCCATGGAGGACACGCGAGACCCGAATATTCATTACGCCGGCACCGTGTGA |
| Gene | >Hirsu2|6448 ATGGCGCAGTCGAATAAGACGTTTCACTGCCACGGGCGTGTCCTGGAGCTCGACCCGGCCGAGGGGGCCGACTAC GAGAGGCCGAGCGCAACGAGGTGAGCAAGGCGAAGTTGGCGCCGGAGCGGAAGAAAGGGGAGGGGTCCGGTGTTG ACGCGTTGGCCTCAGGAGTCGCAGCAACGGGGCCGCGGCGCCGAGGGGCGGAGACCGCGACGGCGGCGACGGCCG GGACGACGACAGCCGTGATGGATGTGAGTTGCCGTGCCGCTGCTTCGACGAGCGCCTGCGCTGACGTGTTCCCTT CGTTCCGGGGGGCAGCGTACTTCCTGCCGACTGATTCGGTGAGTCCGGGTTCTCGGTCCGTCGACCGCGACACAT CCGGCTGACTGCCGTCTCCCAAGGCGGAACAAGACCGTCTGGGTGAGTTCTTCTGTTGCTTCTTCTCCTCACCTT GGCCGCCGTCTGACCGATCGACGGACACAACAGATGAGCAGCACAAGCTGTGTCTCATGCTGCTGGACGGCAAGC TGGGTCTGGCGCCCGTCAAGGCACCTCGGCGTGTCCTCGACGTCGCGACAGGGACGGGCATCTGGGCCATCCAGT ACGGTACGTCGTGCGAACGAGTCCCGCCCCCCTTGCGTTCCTTCGTCGTCGCCGCTGAACACGCGCCAGCGGAGC AGCAGCCGCAGGCCGAGGTCGTCGGCGCGGACCTGTGCGTCTTCCAGCACGAGTCGCCGGCGGCCAACTGCTCCT TCGTCCGGCTGGATGTCGAGAAGGACGCGTGGGGCTTGGATCACGGCTTCGACTACATCCACTTCCGCTACGTGC TCAGCTGCTTCGACGACACGCGGGCCGTGATCGGCACGGCCTTTGACCACCTCAGCCCGGGCGGCTACGTCGAGT TCCACGACTTCGTCTTCTCCATCGTCGACCTCGACGGCTCCTTCAAGGGCACCGCCCTCGAGCGCTGGCAGGCCG CCGTCAGCAGGGGCGCCGCCAGCGTCGGCCGCGACCTCAACAAGGCCGTCCTGTACCCCGGCTGGTGCCGCGACG CCGGCTTCGTCGACGTGACCGAGACGCTGTTCCCGCTGCCCTTCGGCACCTGGGTCAGGGGGGCGGCCATGAAGA GGTTGGGTGAAGCGGCGGTGCGCAACATCCGGGCGCTGATTGGCGGCTCGCTCAGGAGCTTCCTCGAGCTGGCCG GCCTGTCCAAGAGCGAGATGGAGGAGCTGATCGACGAGGCCATGGAGGACACGCGAGACCCGAATATTCATTACG CCGGCACCGTGTGA |