© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6447 |
| Gene name | |
| Location | Contig_331:4062..4926 |
| Strand | + |
| Gene length (bp) | 864 |
| Transcript length (bp) | 714 |
| Coding sequence length (bp) | 714 |
| Protein length (aa) | 238 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00106 | adh_short | short chain dehydrogenase | 1.2E-15 | 11 | 207 |
| PF13561 | adh_short_C2 | Enoyl-(Acyl carrier protein) reductase | 2.1E-15 | 18 | 208 |
| PF08659 | KR | KR domain | 5.6E-09 | 11 | 112 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O00058|MTDH_UROFA | Probable NADP-dependent mannitol dehydrogenase OS=Uromyces fabae GN=PIG8 PE=2 SV=1 | 7 | 219 | 2.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6447 MAGRKCDYCLVVIGSGPGIGVHVGALFASRRYSRLALIARSEPRLAEDRAAIEAAAPGVSVKTYAADVTDLARLR AVLDQIGRDLGTVECLFFNAAQVRPSKLLEADEDDMVYDFKIACSSLHVTAKWAVPQLVQLSRSDPDAKPSLLIT SSLLPQQPDPDCFFALSVVKAAQRNMAESMAKVYGPQGVHVGLIVVGGVVDPSNRTLNPKHIAERTWDLFNQPWD ARTFEVEILEDS* |
| Coding | >Hirsu2|6447 ATGGCAGGTCGAAAGTGCGACTACTGCCTCGTCGTCATCGGCTCCGGCCCAGGCATCGGCGTCCACGTCGGCGCT CTCTTCGCCTCCAGGCGCTACTCCAGGCTCGCCCTCATCGCCCGCAGCGAGCCGCGTCTCGCCGAAGACCGCGCC GCCATCGAGGCCGCAGCCCCGGGCGTCTCGGTCAAGACGTATGCGGCCGACGTGACCGATCTGGCGCGGTTGCGG GCCGTCCTGGACCAGATCGGACGGGATCTGGGCACCGTCGAGTGTCTCTTCTTCAACGCCGCTCAGGTGCGGCCG TCGAAGCTTCTCGAGGCTGACGAGGACGACATGGTCTACGACTTCAAGATCGCGTGCAGCAGTCTTCATGTTACG GCGAAGTGGGCTGTGCCGCAGCTTGTCCAGCTCTCGCGATCCGATCCGGACGCGAAGCCGTCGCTGCTCATCACC AGCTCTCTCCTACCGCAGCAGCCAGACCCGGACTGTTTTTTCGCCCTCTCCGTGGTGAAGGCGGCACAGAGGAAC ATGGCCGAGTCCATGGCCAAGGTCTACGGCCCGCAGGGCGTCCACGTCGGTCTCATAGTCGTGGGGGGGGTTGTG GACCCTTCCAACAGGACGTTGAACCCCAAGCACATTGCTGAGCGGACGTGGGACCTGTTCAATCAGCCGTGGGAC GCCAGGACGTTTGAGGTAGAGATCCTGGAAGATTCGTAG |
| Transcript | >Hirsu2|6447 ATGGCAGGTCGAAAGTGCGACTACTGCCTCGTCGTCATCGGCTCCGGCCCAGGCATCGGCGTCCACGTCGGCGCT CTCTTCGCCTCCAGGCGCTACTCCAGGCTCGCCCTCATCGCCCGCAGCGAGCCGCGTCTCGCCGAAGACCGCGCC GCCATCGAGGCCGCAGCCCCGGGCGTCTCGGTCAAGACGTATGCGGCCGACGTGACCGATCTGGCGCGGTTGCGG GCCGTCCTGGACCAGATCGGACGGGATCTGGGCACCGTCGAGTGTCTCTTCTTCAACGCCGCTCAGGTGCGGCCG TCGAAGCTTCTCGAGGCTGACGAGGACGACATGGTCTACGACTTCAAGATCGCGTGCAGCAGTCTTCATGTTACG GCGAAGTGGGCTGTGCCGCAGCTTGTCCAGCTCTCGCGATCCGATCCGGACGCGAAGCCGTCGCTGCTCATCACC AGCTCTCTCCTACCGCAGCAGCCAGACCCGGACTGTTTTTTCGCCCTCTCCGTGGTGAAGGCGGCACAGAGGAAC ATGGCCGAGTCCATGGCCAAGGTCTACGGCCCGCAGGGCGTCCACGTCGGTCTCATAGTCGTGGGGGGGGTTGTG GACCCTTCCAACAGGACGTTGAACCCCAAGCACATTGCTGAGCGGACGTGGGACCTGTTCAATCAGCCGTGGGAC GCCAGGACGTTTGAGGTAGAGATCCTGGAAGATTCGTAG |
| Gene | >Hirsu2|6447 ATGGCAGGTCGAAAGTGCGACTACTGCCTCGTCGTCATCGGCTCCGGCCCAGGCATCGGCGTCCACGTCGGCGCT CTCTTCGCCTCCAGGCGCTACTCCAGGCTCGCCCTCATCGCCCGCAGCGAGCCGCGTCTCGCCGAAGACCGCGCC GCCATCGAGGCCGCAGCCCCGGGCGTCTCGGTCAAGACGTATGCGGCCGACGTGACCGATCTGGCGCGGTTGCGG GCCGTCCTGGACCAGATCGGACGGGATCTGGGCACCGTCGAGTGTCTCTTCTTCAACGCCGCTCAGGTGCGGCCG TCGAAGCTTCTCGAGGCTGACGAGGACGACATGGTCTACGACTTCAAGGTGCGTCGCATCTTCATTCTTCGTGAC CTTCTGGGGGCCCGCAGAGTCCTGGGCGGTGCGGCGGCGCCCTAGACACACACGGTCGCGCTCCGCCCGTCAGAC ACCACGACCGGCCAACTGACATCGTCACGAACGGCGAGGGGGGAGCAGATCGCGTGCAGCAGTCTTCATGTTACG GCGAAGTGGGCTGTGCCGCAGCTTGTCCAGCTCTCGCGATCCGATCCGGACGCGAAGCCGTCGCTGCTCATCACC AGCTCTCTCCTACCGCAGCAGCCAGACCCGGACTGTTTTTTCGCCCTCTCCGTGGTGAAGGCGGCACAGAGGAAC ATGGCCGAGTCCATGGCCAAGGTCTACGGCCCGCAGGGCGTCCACGTCGGTCTCATAGTCGTGGGGGGGGTTGTG GACCCTTCCAACAGGACGTTGAACCCCAAGCACATTGCTGAGCGGACGTGGGACCTGTTCAATCAGCCGTGGGAC GCCAGGACGTTTGAGGTAGAGATCCTGGAAGATTCGTAG |