© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6429 |
| Gene name | |
| Location | Contig_33:47677..49263 |
| Strand | + |
| Gene length (bp) | 1586 |
| Transcript length (bp) | 1524 |
| Coding sequence length (bp) | 1524 |
| Protein length (aa) | 508 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01565 | FAD_binding_4 | FAD binding domain | 1.7E-22 | 66 | 201 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 62 | 501 | 3.0E-45 |
| sp|D4B1P2|A2372_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 | 14 | 501 | 4.0E-34 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 37 | 306 | 1.0E-16 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 59 | 253 | 2.0E-16 |
| sp|Q796Y5|YGAK_BACSU | Uncharacterized FAD-linked oxidoreductase YgaK OS=Bacillus subtilis (strain 168) GN=ygaK PE=3 SV=4 | 59 | 233 | 2.0E-12 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 62 | 501 | 3.0E-45 |
| sp|D4B1P2|A2372_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 | 14 | 501 | 4.0E-34 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 37 | 306 | 1.0E-16 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 59 | 253 | 2.0E-16 |
| sp|Q796Y5|YGAK_BACSU | Uncharacterized FAD-linked oxidoreductase YgaK OS=Bacillus subtilis (strain 168) GN=ygaK PE=3 SV=4 | 59 | 233 | 2.0E-12 |
| sp|Q54H55|Y8969_DICDI | FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 | 34 | 256 | 4.0E-12 |
| sp|D4B1Z7|A2478_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 | 131 | 234 | 6.0E-12 |
| sp|Q8GTB6|THCAS_CANSA | Tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=1 SV=1 | 22 | 347 | 1.0E-09 |
| sp|O22213|CKX1_ARATH | Cytokinin dehydrogenase 1 OS=Arabidopsis thaliana GN=CKX1 PE=1 SV=1 | 66 | 238 | 4.0E-09 |
| sp|D4AS41|A7056_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 | 76 | 491 | 5.0E-08 |
| sp|Q9FUJ3|CKX2_ARATH | Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana GN=CKX2 PE=1 SV=2 | 66 | 224 | 1.0E-07 |
| sp|Q33DQ2|THCAI_CANSA | Inactive tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=3 SV=1 | 22 | 347 | 2.0E-07 |
| sp|O06997|YVDP_BACSU | Uncharacterized FAD-linked oxidoreductase YvdP OS=Bacillus subtilis (strain 168) GN=yvdP PE=1 SV=1 | 38 | 222 | 2.0E-07 |
| sp|A6P6V9|CBDAS_CANSA | Cannabidiolic acid synthase OS=Cannabis sativa GN=CBDAS PE=1 SV=1 | 65 | 290 | 4.0E-07 |
| sp|A6P6W0|CASL1_CANSA | Cannabidiolic acid synthase-like 1 OS=Cannabis sativa GN=CBDAS2 PE=2 SV=1 | 22 | 290 | 9.0E-07 |
| sp|A6P6W1|CASL2_CANSA | Cannabidiolic acid synthase-like 2 OS=Cannabis sativa GN=CBDAS3 PE=2 SV=1 | 22 | 290 | 1.0E-06 |
| sp|Q90YK3|GGLO_SCYTO | L-gulonolactone oxidase OS=Scyliorhinus torazame GN=GULO PE=2 SV=1 | 47 | 260 | 2.0E-06 |
| sp|Q75K78|CKX9_ORYSJ | Cytokinin dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CKX9 PE=2 SV=1 | 93 | 238 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0036094 | small molecule binding | No |
| GO:0043168 | anion binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0003674 | molecular_function | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1705 | 0.0582 | 0.9164 | 0.1116 | 0.1298 | 0.1359 | 0.3238 | 0.3684 | 0.1994 | 0.0171 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 24 | 0.966085 |
| CAZyme category | E-value | Start | End |
|---|---|---|---|
| AA7 | 1.3E-57 | 56 | 247 |
| Orthofinder run ID | 4 |
| Orthogroup | 23 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6429 MGPSPSKLALKAIAAACLASAAAADPDRDPCRALARALPGEVHLPDSAAYRAENMYWSNRQAEARPRCFVTPRGT MEVSRALKTLTELRAPFSVKSGGHTAFEGGSGADKGVTIDLVNFREVTVWSDNKTVTVGAGNRWINVSRALDPLG LAVVGGRAADVGVSGLILGGGISYFSGTRGWACDNVRSFRVVVSSGDAVTASPTENQDLYWALRGGGGSSFGIVV SFDLEAFPQADLWTNSIIFPGASNKTLIPLFTHLSNRGLVENPQAHAYFVLSYQPGISGFAVLTSFFQSTPLPNH AVPSVFQPFQSVPGAVSNVAQVVNISTQSMAIDQPSGSRQTWWDTSVSMASPKLFEDIVSMYEDYVHKLLEAAKG SKLTTFLVFQPISQNVVDAMQKNGGNALGLKPSDGPLMIVQISVQWSDKNLDSVVEGSSQSLIEDVETLSKARGL FRGFIYMNYAGKSQDVFGRYGRESYDRLKKTAFRWDPNGLLEDLWKGYFQVRNFEHD* |
| Coding | >Hirsu2|6429 ATGGGGCCCTCCCCGTCCAAGCTGGCTCTCAAGGCCATCGCCGCGGCCTGCTTGGCCTCGGCCGCGGCCGCCGAC CCGGACAGGGACCCATGCCGTGCCTTGGCCAGGGCTCTGCCCGGGGAGGTCCACCTCCCGGACTCGGCCGCGTAC CGGGCCGAGAACATGTACTGGTCCAACCGGCAGGCCGAGGCCCGTCCGCGATGCTTCGTGACGCCCAGGGGCACC ATGGAGGTCTCCCGGGCCCTGAAGACGCTGACGGAGCTGCGGGCGCCCTTCAGCGTCAAGTCCGGCGGACACACG GCGTTCGAGGGGGGGTCCGGCGCCGATAAAGGCGTCACCATCGACCTCGTGAATTTCCGCGAGGTCACCGTATGG TCCGACAACAAGACCGTCACGGTCGGCGCCGGCAACCGATGGATCAACGTCTCGCGCGCGCTCGACCCCCTGGGC CTGGCCGTCGTGGGCGGACGGGCCGCCGACGTCGGCGTCAGCGGCCTGATCCTCGGTGGCGGCATCTCCTATTTC TCGGGCACGCGCGGCTGGGCGTGCGACAACGTCCGCTCGTTCCGCGTCGTCGTCTCTTCGGGGGACGCGGTCACG GCGTCGCCCACCGAAAATCAGGATCTGTACTGGGCCCTCCGCGGCGGCGGCGGCTCCAGCTTCGGCATCGTCGTC TCCTTCGACCTCGAGGCCTTCCCGCAAGCCGACCTGTGGACAAACTCGATCATCTTCCCCGGGGCCTCGAACAAG ACCTTGATCCCCCTGTTTACCCATCTCAGCAACCGGGGCCTGGTGGAGAACCCCCAGGCTCACGCCTACTTCGTC CTGAGCTACCAACCTGGCATCAGCGGCTTCGCCGTTCTGACCAGCTTCTTCCAGTCGACGCCACTGCCGAACCAC GCCGTACCGTCCGTCTTCCAGCCGTTTCAGTCCGTCCCTGGAGCCGTTTCCAACGTAGCGCAGGTGGTCAACATC TCGACCCAGTCCATGGCCATTGACCAGCCTTCGGGCTCTCGCCAGACCTGGTGGGACACGTCTGTCTCCATGGCC TCGCCCAAGCTTTTCGAAGACATTGTCTCCATGTACGAGGACTATGTGCACAAGCTGCTCGAAGCCGCCAAGGGC TCCAAGTTGACTACCTTTCTCGTTTTCCAGCCCATCTCCCAGAACGTCGTCGATGCCATGCAGAAGAATGGCGGA AACGCGCTGGGCCTCAAGCCCAGCGATGGGCCACTGATGATTGTGCAGATTTCAGTCCAGTGGAGCGACAAAAAC TTGGATTCCGTCGTCGAAGGCTCATCCCAGTCCTTGATCGAAGACGTCGAGACGCTTTCGAAGGCGAGAGGCCTG TTCCGAGGATTCATCTACATGAACTATGCCGGGAAAAGCCAAGACGTCTTCGGCCGATACGGTCGAGAGAGCTAC GATCGTTTAAAAAAGACGGCATTCCGTTGGGACCCCAATGGACTTCTCGAAGATCTCTGGAAGGGGTATTTTCAA GTCCGCAACTTTGAGCATGACTAG |
| Transcript | >Hirsu2|6429 ATGGGGCCCTCCCCGTCCAAGCTGGCTCTCAAGGCCATCGCCGCGGCCTGCTTGGCCTCGGCCGCGGCCGCCGAC CCGGACAGGGACCCATGCCGTGCCTTGGCCAGGGCTCTGCCCGGGGAGGTCCACCTCCCGGACTCGGCCGCGTAC CGGGCCGAGAACATGTACTGGTCCAACCGGCAGGCCGAGGCCCGTCCGCGATGCTTCGTGACGCCCAGGGGCACC ATGGAGGTCTCCCGGGCCCTGAAGACGCTGACGGAGCTGCGGGCGCCCTTCAGCGTCAAGTCCGGCGGACACACG GCGTTCGAGGGGGGGTCCGGCGCCGATAAAGGCGTCACCATCGACCTCGTGAATTTCCGCGAGGTCACCGTATGG TCCGACAACAAGACCGTCACGGTCGGCGCCGGCAACCGATGGATCAACGTCTCGCGCGCGCTCGACCCCCTGGGC CTGGCCGTCGTGGGCGGACGGGCCGCCGACGTCGGCGTCAGCGGCCTGATCCTCGGTGGCGGCATCTCCTATTTC TCGGGCACGCGCGGCTGGGCGTGCGACAACGTCCGCTCGTTCCGCGTCGTCGTCTCTTCGGGGGACGCGGTCACG GCGTCGCCCACCGAAAATCAGGATCTGTACTGGGCCCTCCGCGGCGGCGGCGGCTCCAGCTTCGGCATCGTCGTC TCCTTCGACCTCGAGGCCTTCCCGCAAGCCGACCTGTGGACAAACTCGATCATCTTCCCCGGGGCCTCGAACAAG ACCTTGATCCCCCTGTTTACCCATCTCAGCAACCGGGGCCTGGTGGAGAACCCCCAGGCTCACGCCTACTTCGTC CTGAGCTACCAACCTGGCATCAGCGGCTTCGCCGTTCTGACCAGCTTCTTCCAGTCGACGCCACTGCCGAACCAC GCCGTACCGTCCGTCTTCCAGCCGTTTCAGTCCGTCCCTGGAGCCGTTTCCAACGTAGCGCAGGTGGTCAACATC TCGACCCAGTCCATGGCCATTGACCAGCCTTCGGGCTCTCGCCAGACCTGGTGGGACACGTCTGTCTCCATGGCC TCGCCCAAGCTTTTCGAAGACATTGTCTCCATGTACGAGGACTATGTGCACAAGCTGCTCGAAGCCGCCAAGGGC TCCAAGTTGACTACCTTTCTCGTTTTCCAGCCCATCTCCCAGAACGTCGTCGATGCCATGCAGAAGAATGGCGGA AACGCGCTGGGCCTCAAGCCCAGCGATGGGCCACTGATGATTGTGCAGATTTCAGTCCAGTGGAGCGACAAAAAC TTGGATTCCGTCGTCGAAGGCTCATCCCAGTCCTTGATCGAAGACGTCGAGACGCTTTCGAAGGCGAGAGGCCTG TTCCGAGGATTCATCTACATGAACTATGCCGGGAAAAGCCAAGACGTCTTCGGCCGATACGGTCGAGAGAGCTAC GATCGTTTAAAAAAGACGGCATTCCGTTGGGACCCCAATGGACTTCTCGAAGATCTCTGGAAGGGGTATTTTCAA GTCCGCAACTTTGAGCATGACTAG |
| Gene | >Hirsu2|6429 ATGGGGCCCTCCCCGTCCAAGCTGGCTCTCAAGGCCATCGCCGCGGCCTGCTTGGCCTCGGCCGCGGCCGCCGAC CCGGACAGGGACCCAGTACGGAAGCGGAGCCGATTCTTGCTCCTTGGACGCCGAGGCTGATCCTTTCTCATCCGC AGTGCCGTGCCTTGGCCAGGGCTCTGCCCGGGGAGGTCCACCTCCCGGACTCGGCCGCGTACCGGGCCGAGAACA TGTACTGGTCCAACCGGCAGGCCGAGGCCCGTCCGCGATGCTTCGTGACGCCCAGGGGCACCATGGAGGTCTCCC GGGCCCTGAAGACGCTGACGGAGCTGCGGGCGCCCTTCAGCGTCAAGTCCGGCGGACACACGGCGTTCGAGGGGG GGTCCGGCGCCGATAAAGGCGTCACCATCGACCTCGTGAATTTCCGCGAGGTCACCGTATGGTCCGACAACAAGA CCGTCACGGTCGGCGCCGGCAACCGATGGATCAACGTCTCGCGCGCGCTCGACCCCCTGGGCCTGGCCGTCGTGG GCGGACGGGCCGCCGACGTCGGCGTCAGCGGCCTGATCCTCGGTGGCGGCATCTCCTATTTCTCGGGCACGCGCG GCTGGGCGTGCGACAACGTCCGCTCGTTCCGCGTCGTCGTCTCTTCGGGGGACGCGGTCACGGCGTCGCCCACCG AAAATCAGGATCTGTACTGGGCCCTCCGCGGCGGCGGCGGCTCCAGCTTCGGCATCGTCGTCTCCTTCGACCTCG AGGCCTTCCCGCAAGCCGACCTGTGGACAAACTCGATCATCTTCCCCGGGGCCTCGAACAAGACCTTGATCCCCC TGTTTACCCATCTCAGCAACCGGGGCCTGGTGGAGAACCCCCAGGCTCACGCCTACTTCGTCCTGAGCTACCAAC CTGGCATCAGCGGCTTCGCCGTTCTGACCAGCTTCTTCCAGTCGACGCCACTGCCGAACCACGCCGTACCGTCCG TCTTCCAGCCGTTTCAGTCCGTCCCTGGAGCCGTTTCCAACGTAGCGCAGGTGGTCAACATCTCGACCCAGTCCA TGGCCATTGACCAGCCTTCGGGCTCTCGCCAGACCTGGTGGGACACGTCTGTCTCCATGGCCTCGCCCAAGCTTT TCGAAGACATTGTCTCCATGTACGAGGACTATGTGCACAAGCTGCTCGAAGCCGCCAAGGGCTCCAAGTTGACTA CCTTTCTCGTTTTCCAGCCCATCTCCCAGAACGTCGTCGATGCCATGCAGAAGAATGGCGGAAACGCGCTGGGCC TCAAGCCCAGCGATGGGCCACTGATGATTGTGCAGATTTCAGTCCAGTGGAGCGACAAAAACTTGGATTCCGTCG TCGAAGGCTCATCCCAGTCCTTGATCGAAGACGTCGAGACGCTTTCGAAGGCGAGAGGCCTGTTCCGAGGATTCA TCTACATGAACTATGCCGGGAAAAGCCAAGACGTCTTCGGCCGATACGGTCGAGAGAGCTACGATCGTTTAAAAA AGACGGCATTCCGTTGGGACCCCAATGGACTTCTCGAAGATCTCTGGAAGGGGTATTTTCAAGTCCGCAACTTTG AGCATGACTAG |