© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6418 |
| Gene name | |
| Location | Contig_33:3599..4250 |
| Strand | - |
| Gene length (bp) | 651 |
| Transcript length (bp) | 651 |
| Coding sequence length (bp) | 651 |
| Protein length (aa) | 217 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF11991 | Trp_DMAT | Tryptophan dimethylallyltransferase | 2.1E-35 | 1 | 140 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6Q874|SIRD_LEPMC | 4-O-dimethylallyl-L-tyrosine synthase OS=Leptosphaeria maculans GN=sirD PE=1 SV=1 | 1 | 190 | 3.0E-32 |
| sp|Q4WYG3|7DMAW_ASPFU | 7-dimethylallyltryptophan synthase OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=etpPT PE=1 SV=2 | 1 | 174 | 3.0E-14 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | Yes |
| GO:0009820 | alkaloid metabolic process | Yes |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0016740 | transferase activity | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0008150 | biological_process | No |
| GO:0003674 | molecular_function | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 44 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6418 MLSVDNVAPSQSRLKFYVRTPHTSFSSVRAIMTMGGKIDVAESQLSDLRSLIVAAAGLEPDFPDDAEVPLAPEPN SGFKTTLAEMPVPLSGYEYYFDIAPGAVVPHIKFYLPLRHYGPDDLTMARGLTSWMETRGRGQYMYGQRYLAMLE RMSDHRKLGDGKGMHAYLSCIFAKGELDITSCIAPELCVPAASTPPKIVIPRRATRRRGDSPIGMD* |
| Coding | >Hirsu2|6418 ATGCTGTCCGTCGACAACGTTGCACCGTCCCAGTCCCGGCTGAAGTTCTACGTCCGCACGCCGCACACGAGCTTC TCGTCCGTGAGGGCCATCATGACGATGGGAGGCAAGATTGACGTCGCCGAGTCGCAGCTGAGCGACCTCCGCAGC CTGATCGTCGCCGCGGCCGGACTGGAGCCCGACTTCCCCGACGACGCCGAAGTTCCGCTCGCACCCGAGCCGAAC TCCGGCTTCAAGACGACCCTGGCCGAGATGCCCGTGCCGTTGTCCGGGTACGAATACTACTTCGACATCGCCCCC GGCGCCGTTGTGCCCCATATCAAGTTCTACCTTCCGCTGAGGCACTACGGACCTGACGACCTGACCATGGCACGC GGCCTCACGAGCTGGATGGAGACCCGCGGCCGCGGCCAGTACATGTACGGCCAGCGCTACCTCGCGATGCTGGAG CGCATGTCGGACCATCGCAAACTGGGGGACGGGAAGGGAATGCACGCCTATCTGAGCTGCATCTTCGCCAAGGGC GAGCTCGACATCACGTCGTGTATCGCTCCCGAGCTGTGTGTCCCGGCTGCGTCGACGCCTCCGAAGATTGTCATC CCACGAAGGGCAACGAGACGGCGTGGAGATAGTCCGATAGGTATGGATTAG |
| Transcript | >Hirsu2|6418 ATGCTGTCCGTCGACAACGTTGCACCGTCCCAGTCCCGGCTGAAGTTCTACGTCCGCACGCCGCACACGAGCTTC TCGTCCGTGAGGGCCATCATGACGATGGGAGGCAAGATTGACGTCGCCGAGTCGCAGCTGAGCGACCTCCGCAGC CTGATCGTCGCCGCGGCCGGACTGGAGCCCGACTTCCCCGACGACGCCGAAGTTCCGCTCGCACCCGAGCCGAAC TCCGGCTTCAAGACGACCCTGGCCGAGATGCCCGTGCCGTTGTCCGGGTACGAATACTACTTCGACATCGCCCCC GGCGCCGTTGTGCCCCATATCAAGTTCTACCTTCCGCTGAGGCACTACGGACCTGACGACCTGACCATGGCACGC GGCCTCACGAGCTGGATGGAGACCCGCGGCCGCGGCCAGTACATGTACGGCCAGCGCTACCTCGCGATGCTGGAG CGCATGTCGGACCATCGCAAACTGGGGGACGGGAAGGGAATGCACGCCTATCTGAGCTGCATCTTCGCCAAGGGC GAGCTCGACATCACGTCGTGTATCGCTCCCGAGCTGTGTGTCCCGGCTGCGTCGACGCCTCCGAAGATTGTCATC CCACGAAGGGCAACGAGACGGCGTGGAGATAGTCCGATAGGTATGGATTAG |
| Gene | >Hirsu2|6418 ATGCTGTCCGTCGACAACGTTGCACCGTCCCAGTCCCGGCTGAAGTTCTACGTCCGCACGCCGCACACGAGCTTC TCGTCCGTGAGGGCCATCATGACGATGGGAGGCAAGATTGACGTCGCCGAGTCGCAGCTGAGCGACCTCCGCAGC CTGATCGTCGCCGCGGCCGGACTGGAGCCCGACTTCCCCGACGACGCCGAAGTTCCGCTCGCACCCGAGCCGAAC TCCGGCTTCAAGACGACCCTGGCCGAGATGCCCGTGCCGTTGTCCGGGTACGAATACTACTTCGACATCGCCCCC GGCGCCGTTGTGCCCCATATCAAGTTCTACCTTCCGCTGAGGCACTACGGACCTGACGACCTGACCATGGCACGC GGCCTCACGAGCTGGATGGAGACCCGCGGCCGCGGCCAGTACATGTACGGCCAGCGCTACCTCGCGATGCTGGAG CGCATGTCGGACCATCGCAAACTGGGGGACGGGAAGGGAATGCACGCCTATCTGAGCTGCATCTTCGCCAAGGGC GAGCTCGACATCACGTCGTGTATCGCTCCCGAGCTGTGTGTCCCGGCTGCGTCGACGCCTCCGAAGATTGTCATC CCACGAAGGGCAACGAGACGGCGTGGAGATAGTCCGATAGGTATGGATTAG |