Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|641
Gene name
LocationContig_1129:2793..4955
Strand-
Gene length (bp)2162
Transcript length (bp)1401
Coding sequence length (bp)1401
Protein length (aa) 467

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 1.3E-32 30 399

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 17 466 2.0E-78
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 11 457 3.0E-77
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 21 459 1.0E-76
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 11 463 7.0E-61
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 11 466 2.0E-51
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Swissprot ID Swissprot Description Start End E-value
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 17 466 2.0E-78
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 11 457 3.0E-77
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 21 459 1.0E-76
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 11 463 7.0E-61
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 11 466 2.0E-51
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 11 398 3.0E-42
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 6 400 8.0E-42
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 12 322 4.0E-40
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 11 441 7.0E-37
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 16 458 1.0E-35
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 11 463 4.0E-33
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 11 466 1.0E-30
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 10 229 6.0E-30
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 15 463 5.0E-28
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 16 264 4.0E-26
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 20 422 2.0E-25
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 9 466 3.0E-25
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 10 465 2.0E-19
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 8 416 1.0E-18
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 21 290 4.0E-18
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 26 268 3.0E-17
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 66 431 2.0E-16
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 8 465 2.0E-16
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 21 377 3.0E-15
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 100 205 5.0E-15
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 16 444 1.0E-14
sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 20 336 1.0E-10
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 5 290 1.0E-09
sp|P39398|LGOT_ECOLI Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 12 360 9.0E-06
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0031224 intrinsic component of membrane No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0051179 localization No
GO:0051234 establishment of localization No
GO:0044425 membrane part No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 48 0.5

Transmembrane Domains

Domain # Start End Length
1 63 85 22
2 92 114 22
3 119 141 22
4 148 170 22
5 185 207 22
6 257 279 22
7 294 316 22
8 323 345 22
9 350 372 22
10 385 404 19
11 414 436 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|641
MGPKPTARPGDDGLARAVLLKTDSRLLPVLALLFLCSFLDRTNVGNARIIGLEPDLRISDRQYAQGLAVFYATYI
ASELPSNLVLKRASPRVWLPCLAAAWGIATTALGFVRGFGAFLAVRALLGIAEGGLLPGMVLYLSGLYTRGELAL
RIGIFYTAASLSGAFGGLLARGLSAIGPRGGLEGWRWIFIIEGLITVVAAIVAYFNLPNSPATASYLTLEEREWA
MRRLAMDFNSARESEERFRWSEVGRGVLNVQVWLTSTAYFAILSGLYSFGLFLPTIVNDLHIASNPNTVQLWTVI
PYAVATPVTVIVAFLSDRLKLRGILILAVLPVAIAGYAAMANITGPSPRFAMTCLMAIGLYSAVPCVLVWNSNNS
AGHYKRATTSALQLAVANCGGFVATFVYPQSDRPFYRRGHTIILGLLCYAWLAVLVNVLWCAKINQDKQRGRYEK
YVDCGDDRDPEFRMVL*
Coding >Hirsu2|641
ATGGGCCCGAAGCCGACAGCCCGCCCCGGCGACGACGGCCTGGCCCGGGCCGTGCTGCTCAAGACGGACAGCCGC
CTTCTGCCCGTCCTGGCCCTGCTCTTCCTCTGCTCGTTCCTCGACCGGACAAACGTGGGCAACGCGCGCATCATC
GGCCTCGAGCCGGACCTGCGCATCTCGGACCGCCAGTACGCCCAGGGCCTGGCTGTCTTCTACGCCACCTACATT
GCCAGCGAGCTGCCGAGCAACCTGGTGCTGAAGAGGGCCTCGCCGCGCGTCTGGCTGCCCTGCCTGGCCGCCGCC
TGGGGCATTGCCACCACCGCCCTGGGCTTCGTCCGCGGCTTCGGCGCTTTCCTGGCCGTTCGGGCTCTGCTCGGC
ATCGCCGAGGGCGGCTTGCTGCCGGGCATGGTCCTCTACCTGTCGGGCCTCTACACCCGTGGCGAGCTGGCCCTG
CGGATCGGCATCTTCTACACGGCCGCCTCGCTGTCCGGTGCATTCGGAGGCCTTCTCGCCCGTGGCCTCTCTGCC
ATCGGACCGCGAGGCGGACTCGAGGGCTGGCGCTGGATCTTCATCATCGAAGGCCTCATCACTGTCGTGGCCGCC
ATCGTCGCCTATTTCAACCTGCCCAACAGCCCGGCCACGGCCAGCTACCTGACTCTGGAGGAGCGCGAGTGGGCT
ATGCGGCGTCTGGCGATGGACTTCAATTCCGCCCGTGAGAGCGAGGAGAGATTCCGCTGGTCCGAGGTCGGCCGT
GGCGTCCTCAACGTCCAGGTCTGGCTCACGTCGACGGCCTACTTTGCCATTCTGTCCGGCCTCTACTCTTTCGGC
CTCTTTCTGCCGACCATTGTCAATGATCTTCACATCGCCTCCAACCCCAACACAGTCCAGCTCTGGACCGTCATT
CCTTACGCCGTAGCTACCCCCGTGACGGTCATCGTTGCTTTCCTCTCGGATCGTCTCAAGCTACGAGGCATCCTC
ATTCTGGCTGTTCTGCCCGTCGCCATCGCCGGGTACGCAGCCATGGCCAACATCACGGGTCCCTCGCCACGCTTC
GCCATGACGTGCCTCATGGCCATCGGACTGTATTCCGCCGTGCCGTGCGTCCTCGTCTGGAACTCGAATAATTCG
GCTGGCCACTACAAGAGGGCGACCACGTCGGCCTTGCAGCTTGCCGTCGCCAACTGCGGAGGTTTTGTTGCCACT
TTCGTGTATCCTCAGAGCGACCGGCCCTTTTACCGCAGAGGTCACACCATCATTCTGGGTCTGCTCTGCTACGCA
TGGCTGGCTGTTCTTGTCAATGTTCTTTGGTGTGCCAAGATAAACCAGGACAAGCAGCGCGGGCGGTACGAAAAG
TACGTGGACTGCGGAGACGACCGTGATCCCGAGTTTCGGATGGTGCTTTGA
Transcript >Hirsu2|641
ATGGGCCCGAAGCCGACAGCCCGCCCCGGCGACGACGGCCTGGCCCGGGCCGTGCTGCTCAAGACGGACAGCCGC
CTTCTGCCCGTCCTGGCCCTGCTCTTCCTCTGCTCGTTCCTCGACCGGACAAACGTGGGCAACGCGCGCATCATC
GGCCTCGAGCCGGACCTGCGCATCTCGGACCGCCAGTACGCCCAGGGCCTGGCTGTCTTCTACGCCACCTACATT
GCCAGCGAGCTGCCGAGCAACCTGGTGCTGAAGAGGGCCTCGCCGCGCGTCTGGCTGCCCTGCCTGGCCGCCGCC
TGGGGCATTGCCACCACCGCCCTGGGCTTCGTCCGCGGCTTCGGCGCTTTCCTGGCCGTTCGGGCTCTGCTCGGC
ATCGCCGAGGGCGGCTTGCTGCCGGGCATGGTCCTCTACCTGTCGGGCCTCTACACCCGTGGCGAGCTGGCCCTG
CGGATCGGCATCTTCTACACGGCCGCCTCGCTGTCCGGTGCATTCGGAGGCCTTCTCGCCCGTGGCCTCTCTGCC
ATCGGACCGCGAGGCGGACTCGAGGGCTGGCGCTGGATCTTCATCATCGAAGGCCTCATCACTGTCGTGGCCGCC
ATCGTCGCCTATTTCAACCTGCCCAACAGCCCGGCCACGGCCAGCTACCTGACTCTGGAGGAGCGCGAGTGGGCT
ATGCGGCGTCTGGCGATGGACTTCAATTCCGCCCGTGAGAGCGAGGAGAGATTCCGCTGGTCCGAGGTCGGCCGT
GGCGTCCTCAACGTCCAGGTCTGGCTCACGTCGACGGCCTACTTTGCCATTCTGTCCGGCCTCTACTCTTTCGGC
CTCTTTCTGCCGACCATTGTCAATGATCTTCACATCGCCTCCAACCCCAACACAGTCCAGCTCTGGACCGTCATT
CCTTACGCCGTAGCTACCCCCGTGACGGTCATCGTTGCTTTCCTCTCGGATCGTCTCAAGCTACGAGGCATCCTC
ATTCTGGCTGTTCTGCCCGTCGCCATCGCCGGGTACGCAGCCATGGCCAACATCACGGGTCCCTCGCCACGCTTC
GCCATGACGTGCCTCATGGCCATCGGACTGTATTCCGCCGTGCCGTGCGTCCTCGTCTGGAACTCGAATAATTCG
GCTGGCCACTACAAGAGGGCGACCACGTCGGCCTTGCAGCTTGCCGTCGCCAACTGCGGAGGTTTTGTTGCCACT
TTCGTGTATCCTCAGAGCGACCGGCCCTTTTACCGCAGAGGTCACACCATCATTCTGGGTCTGCTCTGCTACGCA
TGGCTGGCTGTTCTTGTCAATGTTCTTTGGTGTGCCAAGATAAACCAGGACAAGCAGCGCGGGCGGTACGAAAAG
TACGTGGACTGCGGAGACGACCGTGATCCCGAGTTTCGGATGGTGCTTTGA
Gene >Hirsu2|641
ATGGGCCCGAAGCCGACAGCCCGCCCCGGCGACGACGGCCTGGCCCGGGCCGTGCTGCTCAAGACGGACAGCCGG
TGAGTGGGAGTCGCCTCGACCCCGGCTCTGCCTGCTTCGCCTGTTTACACGCCTCCTCTCCGCGCCGCGCCGCCG
CTCTGCCTCTCCCTCCCCCCCTTCGCCGCGCCGCAGCCTTCTGCCCGTCCTGGCCCTGCTCTTCCTCTGCTCGTT
CCTCGACCGGACAAACGTGGGCAACGCGCGCATCATCGGCCTCGAGCCGGACCTGCGCATCTCGGACCGCCAGTA
CGCCCAGGGCCTGGCTGTCTTCTACGCCACCTACATTGCCAGGTTCGGCCCTCCCCCGGCGCCGCCGCCCTACCG
GGCTAACCGTGGCCGAAGCGAGCTGCCGAGCAACCTGGTGCTGAAGAGGGCCTCGCCGCGCGTCTGGCTGCCCTG
CCTGGCCGCCGCCTGGGGCATTGCCACCACCGCCCTGGGCTTCGTCCGCGGCTTCGGCGCTTTCCTGGCCGTTCG
GGCTCTGCTCGGCATCGCCGAGGGCGGCTTGCTGCCGGGCATGGTCCTCTACCTGTCGGGCCTCTACACCCGTGG
CGAGCTGGCCCTGCGGATCGGCATCTTCTACACGGCCGCCTCGCTGTCCGGTGCATTCGGAGGCACGTCCTTTTT
TTTTTCTTTTCTTTCTTTCTTTCTGGTCTTTTTATACCTTCAGCATCGGCTGTTGCCGCAGGAAAACCCCTCTCG
CCGTCGTCCAGTCTCTCTCGCTGACTGCTAGGGAGGGAGAGAGTTGAGCCATGTCTAACAGGCCTTCTCGCCCGT
GGCCTCTCTGCCATCGGACCGCGAGGCGGACTCGAGGGCTGGCGCTGGATCTTCATCATCGAAGGCCTCATCGTC
AGTTTGCCCCTTATTTTCTTCTCGACACGTCGGTCCTCGTCGCCTCCTGCGGCTAACGGGACATGGCCGTGTCAA
GACTGTCGTGGCCGCCATCGTCGCCTATTTCAACCTGCCCAACAGCCCGGCCACGGCCAGCTACCTGACTCTGGA
GGAGCGCGAGTGGGCTATGCGGCGTCTGGCGATGGACTTCAAGTGAGTCGCCGGCGCCTTGCTCCCGGGCCCGAC
GTCGCAGCTGACCCGACGGCCGCCGCGCCTTCGAGTTCCGCCCGTGAGAGCGAGGAGAGATTCCGCTGGTCCGAG
GTCGGCCGTGGCGTCCTCAACGTCCAGGTCTGGCTCACGTCGACGGCCTACTTTGCCATTCTGTCCGGCCTCTAC
TCTTTCGGCCTCTTTGTGCGCCCTCTCGCTCGCCCTGCCACCGTGACTTGTGCCCCGGAGTGGAATGGAGACCGG
TCTGGATGCTGACTGCATGTTTCGTCCCAGCTGCCGACCATTGTCAATGATCTTCACATCGCCTCCAACCCCAAC
ACAGTCCAGCTCTGGACCGTCATTCCTTACGCCGTAGCTACCCCCGTGACGGGCGAGTCCCCCCCCTGACCGTGC
TTCACCGCTTCACTCGACGAGTGTCGCGCTGACACCAGGCACGTAGTCATCGTTGCTTTCCTCTCGGATCGTCTC
AAGCTACGAGGCATCCTCATTCTGGCTGTTCTGCCCGTCGCCATCGCCGGGTACGCAGCCATGGCCAACATCACG
GGTCCCTCGCCACGCTTCGCCATGACGTGCCTCATGGCCATCGGACTGTATTCCGCCGTGCCGTGCGTCCTCGTC
TGGAACTCGAATAATTCGGCTGGCCACTACAAGAGGGCGACCACGTCGGCCTTGCAGCTTGCCGTCGCCAACTGC
GGAGGTTTTGTTGCCAGTCAGTCCCCACTTTCACGGCAGCTATGGGCGAAATGAGCAAGAAGAGAGTTGACCTCT
GGCGTCTCAAACAGCTTTCGTGTATCCTCAGAGCGACCGGCCCTTTTACCGCAGAGGTCACACCATCATTCTGGG
TCTGCTCTGCTACGCATGGCTGGCGTGAGTACCTTGTTCCTCCATCGCCATGGCTACACAGGCTCACACAGGTCT
CTGATGGCGATTTGTGCAGTGTTCTTGTCAATGTTCTTTGGTGTGCCAAGATAAACCAGGACAAGCAGCGCGGGC
GGTACGAAAAGTACGTGGACTGCGGAGACGACCGTGATCCCGAGTTTCGGATGGTGCTTTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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