© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6404 |
| Gene name | |
| Location | Contig_3285:83..1074 |
| Strand | - |
| Gene length (bp) | 991 |
| Transcript length (bp) | 873 |
| Coding sequence length (bp) | 873 |
| Protein length (aa) | 291 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF16212 | PhoLip_ATPase_C | Phospholipid-translocating P-type ATPase C-terminal | 3.7E-54 | 7 | 210 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94296|YOOC_SCHPO | Probable phospholipid-transporting ATPase C887.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC887.12 PE=3 SV=1 | 7 | 280 | 1.0E-108 |
| sp|P39524|ATC3_YEAST | Probable phospholipid-transporting ATPase DRS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DRS2 PE=1 SV=2 | 7 | 285 | 2.0E-108 |
| sp|Q9Y2Q0|AT8A1_HUMAN | Phospholipid-transporting ATPase IA OS=Homo sapiens GN=ATP8A1 PE=1 SV=1 | 7 | 274 | 3.0E-42 |
| sp|P70704|AT8A1_MOUSE | Phospholipid-transporting ATPase IA OS=Mus musculus GN=Atp8a1 PE=1 SV=2 | 7 | 274 | 8.0E-42 |
| sp|Q29449|AT8A1_BOVIN | Probable phospholipid-transporting ATPase IA OS=Bos taurus GN=ATP8A1 PE=1 SV=2 | 7 | 274 | 9.0E-41 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94296|YOOC_SCHPO | Probable phospholipid-transporting ATPase C887.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC887.12 PE=3 SV=1 | 7 | 280 | 1.0E-108 |
| sp|P39524|ATC3_YEAST | Probable phospholipid-transporting ATPase DRS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DRS2 PE=1 SV=2 | 7 | 285 | 2.0E-108 |
| sp|Q9Y2Q0|AT8A1_HUMAN | Phospholipid-transporting ATPase IA OS=Homo sapiens GN=ATP8A1 PE=1 SV=1 | 7 | 274 | 3.0E-42 |
| sp|P70704|AT8A1_MOUSE | Phospholipid-transporting ATPase IA OS=Mus musculus GN=Atp8a1 PE=1 SV=2 | 7 | 274 | 8.0E-42 |
| sp|Q29449|AT8A1_BOVIN | Probable phospholipid-transporting ATPase IA OS=Bos taurus GN=ATP8A1 PE=1 SV=2 | 7 | 274 | 9.0E-41 |
| sp|P98200|AT8A2_MOUSE | Phospholipid-transporting ATPase IB OS=Mus musculus GN=Atp8a2 PE=1 SV=1 | 7 | 276 | 2.0E-37 |
| sp|C7EXK4|AT8A2_BOVIN | Phospholipid-transporting ATPase IB OS=Bos taurus GN=ATP8A2 PE=1 SV=4 | 7 | 276 | 2.0E-37 |
| sp|Q9NTI2|AT8A2_HUMAN | Phospholipid-transporting ATPase IB OS=Homo sapiens GN=ATP8A2 PE=1 SV=2 | 7 | 276 | 2.0E-37 |
| sp|Q9LI83|ALA10_ARATH | Phospholipid-transporting ATPase 10 OS=Arabidopsis thaliana GN=ALA10 PE=3 SV=1 | 7 | 238 | 8.0E-32 |
| sp|Q9XIE6|ALA3_ARATH | Phospholipid-transporting ATPase 3 OS=Arabidopsis thaliana GN=ALA3 PE=1 SV=2 | 7 | 256 | 4.0E-30 |
| sp|Q9SAF5|ALA11_ARATH | Probable phospholipid-transporting ATPase 11 OS=Arabidopsis thaliana GN=ALA11 PE=2 SV=1 | 7 | 238 | 9.0E-30 |
| sp|Q9LNQ4|ALA4_ARATH | Probable phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=3 SV=2 | 13 | 241 | 4.0E-28 |
| sp|Q9SX33|ALA9_ARATH | Putative phospholipid-transporting ATPase 9 OS=Arabidopsis thaliana GN=ALA9 PE=3 SV=1 | 7 | 238 | 8.0E-27 |
| sp|Q9SGG3|ALA5_ARATH | Probable phospholipid-transporting ATPase 5 OS=Arabidopsis thaliana GN=ALA5 PE=3 SV=1 | 13 | 241 | 5.0E-26 |
| sp|Q9SLK6|ALA6_ARATH | Phospholipid-transporting ATPase 6 OS=Arabidopsis thaliana GN=ALA6 PE=1 SV=2 | 13 | 273 | 5.0E-26 |
| sp|Q9LVK9|ALA7_ARATH | Probable phospholipid-transporting ATPase 7 OS=Arabidopsis thaliana GN=ALA7 PE=3 SV=3 | 13 | 251 | 7.0E-26 |
| sp|Q9LK90|ALA8_ARATH | Probable phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana GN=ALA8 PE=3 SV=1 | 13 | 215 | 2.0E-25 |
| sp|P57792|ALA12_ARATH | Probable phospholipid-transporting ATPase 12 OS=Arabidopsis thaliana GN=ALA12 PE=2 SV=1 | 7 | 216 | 3.0E-24 |
| sp|Q9U280|TAT1_CAEEL | Phospholipid-transporting ATPase tat-1 OS=Caenorhabditis elegans GN=tat-1 PE=3 SV=3 | 14 | 274 | 9.0E-24 |
| sp|O43520|AT8B1_HUMAN | Phospholipid-transporting ATPase IC OS=Homo sapiens GN=ATP8B1 PE=1 SV=3 | 7 | 253 | 1.0E-23 |
| sp|Q148W0|AT8B1_MOUSE | Phospholipid-transporting ATPase IC OS=Mus musculus GN=Atp8b1 PE=1 SV=2 | 7 | 253 | 2.0E-23 |
| sp|P98197|AT11A_MOUSE | Probable phospholipid-transporting ATPase IH OS=Mus musculus GN=Atp11a PE=1 SV=1 | 7 | 283 | 6.0E-22 |
| sp|Q9Y2G3|AT11B_HUMAN | Probable phospholipid-transporting ATPase IF OS=Homo sapiens GN=ATP11B PE=1 SV=2 | 7 | 216 | 1.0E-21 |
| sp|Q5BL50|AT8B1_XENTR | Phospholipid-transporting ATPase IC OS=Xenopus tropicalis GN=atp8b1 PE=2 SV=1 | 7 | 253 | 2.0E-21 |
| sp|Q9N0Z4|AT11B_RABIT | Probable phospholipid-transporting ATPase IF (Fragment) OS=Oryctolagus cuniculus GN=ATP11B PE=1 SV=2 | 7 | 216 | 7.0E-21 |
| sp|P98198|AT8B2_HUMAN | Phospholipid-transporting ATPase ID OS=Homo sapiens GN=ATP8B2 PE=1 SV=2 | 13 | 258 | 2.0E-18 |
| sp|O94823|AT10B_HUMAN | Probable phospholipid-transporting ATPase VB OS=Homo sapiens GN=ATP10B PE=2 SV=2 | 7 | 195 | 2.0E-18 |
| sp|P98196|AT11A_HUMAN | Probable phospholipid-transporting ATPase IH OS=Homo sapiens GN=ATP11A PE=1 SV=3 | 7 | 216 | 3.0E-18 |
| sp|P98199|AT8B2_MOUSE | Phospholipid-transporting ATPase ID OS=Mus musculus GN=Atp8b2 PE=2 SV=2 | 13 | 258 | 3.0E-17 |
| sp|Q9QZW0|AT11C_MOUSE | Phospholipid-transporting ATPase 11C OS=Mus musculus GN=Atp11c PE=1 SV=2 | 7 | 195 | 4.0E-17 |
| sp|Q8NB49|AT11C_HUMAN | Phospholipid-transporting ATPase IG OS=Homo sapiens GN=ATP11C PE=1 SV=3 | 7 | 195 | 4.0E-17 |
| sp|A3FIN4|AT8B5_MOUSE | Phospholipid-transporting ATPase FetA OS=Mus musculus GN=Atp8b5 PE=2 SV=1 | 7 | 209 | 5.0E-17 |
| sp|Q8K2X1|AT10D_MOUSE | Probable phospholipid-transporting ATPase VD OS=Mus musculus GN=Atp10d PE=2 SV=2 | 7 | 209 | 2.0E-16 |
| sp|Q9P241|AT10D_HUMAN | Probable phospholipid-transporting ATPase VD OS=Homo sapiens GN=ATP10D PE=2 SV=3 | 7 | 263 | 2.0E-16 |
| sp|Q8TF62|AT8B4_HUMAN | Probable phospholipid-transporting ATPase IM OS=Homo sapiens GN=ATP8B4 PE=1 SV=3 | 13 | 220 | 1.0E-15 |
| sp|O60312|AT10A_HUMAN | Probable phospholipid-transporting ATPase VA OS=Homo sapiens GN=ATP10A PE=2 SV=2 | 13 | 195 | 2.0E-14 |
| sp|Q12674|ATC8_YEAST | Probable phospholipid-transporting ATPase DNF3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DNF3 PE=1 SV=1 | 7 | 231 | 3.0E-14 |
| sp|O54827|AT10A_MOUSE | Probable phospholipid-transporting ATPase VA OS=Mus musculus GN=Atp10a PE=1 SV=4 | 7 | 236 | 4.0E-14 |
| sp|P32660|ATC5_YEAST | Phospholipid-transporting ATPase DNF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DNF1 PE=1 SV=2 | 7 | 228 | 6.0E-14 |
| sp|Q9GKS6|AT10D_MACFA | Probable phospholipid-transporting ATPase VD (Fragment) OS=Macaca fascicularis GN=ATP10D PE=2 SV=1 | 7 | 206 | 2.0E-13 |
| sp|O60423|AT8B3_HUMAN | Phospholipid-transporting ATPase IK OS=Homo sapiens GN=ATP8B3 PE=2 SV=4 | 11 | 151 | 6.0E-13 |
| sp|Q6UQ17|AT8B3_MOUSE | Phospholipid-transporting ATPase IK OS=Mus musculus GN=Atp8b3 PE=1 SV=1 | 7 | 159 | 1.0E-11 |
| sp|Q12675|ATC4_YEAST | Phospholipid-transporting ATPase DNF2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DNF2 PE=1 SV=1 | 7 | 234 | 2.0E-11 |
| sp|Q9UT43|YFRD_SCHPO | Putative phospholipid-transporting ATPase C821.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC821.13c PE=1 SV=2 | 13 | 250 | 1.0E-10 |
| sp|O36028|ATCZ_SCHPO | Putative phospholipid-transporting ATPase C4F10.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4F10.16c PE=3 SV=1 | 7 | 210 | 7.0E-10 |
| sp|P98205|ALA2_ARATH | Phospholipid-transporting ATPase 2 OS=Arabidopsis thaliana GN=ALA2 PE=1 SV=1 | 7 | 220 | 1.0E-09 |
| sp|Q09891|ATCX_SCHPO | Putative phospholipid-transporting ATPase C24B11.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.12c PE=3 SV=1 | 7 | 217 | 1.0E-09 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 41 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 29 | 51 | 22 |
| 2 | 71 | 93 | 22 |
| 3 | 108 | 130 | 22 |
| 4 | 137 | 159 | 22 |
| 5 | 181 | 200 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6404 LTRGAQYTFQNVFSGQVIYESWTLSFYNVFYTVLPPLALGILDQFISARLLDRYPQLYMMGQNNYFFRLKVFAEW IANAFYHSLVLYAATQLIWYGDLIQGDGKTAGHWVWGTALYGAVLLTVLGKAALVTSNWTKYHVLAIPGSMAVWY VFIAAYGSLGPMAGLSTEYRGVVPRLYTSPIFWLQTMTLAMLCLLRDFAWKYAKRMYWPQTYHHIQEIQKYNIQD YRPRMEQFQKAIRKVRQVQRMRKQRGYAFSQADESQTRVLQAYDTTKHRGRYGEMASSRPTGGTK* |
| Coding | >Hirsu2|6404 CTGACGCGAGGCGCGCAGTACACGTTCCAGAACGTCTTCTCCGGGCAGGTCATCTACGAGTCGTGGACGCTGTCG TTCTACAACGTCTTCTACACGGTGCTGCCGCCGCTGGCGCTCGGGATCCTGGACCAGTTCATCTCGGCGCGGCTG CTGGACCGGTACCCGCAGCTGTACATGATGGGCCAGAACAACTACTTCTTCCGGCTCAAGGTGTTCGCCGAGTGG ATCGCCAACGCCTTCTACCACTCGCTGGTGCTGTACGCGGCGACGCAGCTGATCTGGTACGGCGACCTGATCCAG GGCGACGGCAAGACGGCCGGGCACTGGGTGTGGGGGACGGCGCTGTACGGGGCGGTGCTGCTGACGGTGCTGGGC AAGGCGGCGCTGGTGACGAGCAACTGGACCAAGTACCACGTGCTGGCGATACCGGGCAGCATGGCGGTCTGGTAC GTCTTCATCGCGGCCTACGGGTCGCTGGGGCCCATGGCCGGGCTGTCGACCGAGTACCGCGGCGTGGTGCCGCGC CTGTACACGAGCCCCATCTTCTGGCTGCAGACGATGACGCTGGCGATGCTGTGCCTGCTGCGCGACTTCGCCTGG AAGTACGCCAAGCGCATGTACTGGCCGCAGACGTACCACCACATCCAGGAGATCCAGAAGTACAACATCCAAGAC TACCGACCGAGAATGGAGCAGTTCCAGAAGGCGATCCGCAAGGTGCGGCAGGTCCAGCGGATGCGTAAGCAGCGC GGCTACGCCTTCTCGCAGGCGGACGAGAGCCAGACGCGCGTGCTGCAGGCCTACGACACGACCAAGCACCGCGGG CGGTACGGCGAGATGGCCAGCTCGCGCCCGACGGGCGGCACCAAGTGA |
| Transcript | >Hirsu2|6404 CTGACGCGAGGCGCGCAGTACACGTTCCAGAACGTCTTCTCCGGGCAGGTCATCTACGAGTCGTGGACGCTGTCG TTCTACAACGTCTTCTACACGGTGCTGCCGCCGCTGGCGCTCGGGATCCTGGACCAGTTCATCTCGGCGCGGCTG CTGGACCGGTACCCGCAGCTGTACATGATGGGCCAGAACAACTACTTCTTCCGGCTCAAGGTGTTCGCCGAGTGG ATCGCCAACGCCTTCTACCACTCGCTGGTGCTGTACGCGGCGACGCAGCTGATCTGGTACGGCGACCTGATCCAG GGCGACGGCAAGACGGCCGGGCACTGGGTGTGGGGGACGGCGCTGTACGGGGCGGTGCTGCTGACGGTGCTGGGC AAGGCGGCGCTGGTGACGAGCAACTGGACCAAGTACCACGTGCTGGCGATACCGGGCAGCATGGCGGTCTGGTAC GTCTTCATCGCGGCCTACGGGTCGCTGGGGCCCATGGCCGGGCTGTCGACCGAGTACCGCGGCGTGGTGCCGCGC CTGTACACGAGCCCCATCTTCTGGCTGCAGACGATGACGCTGGCGATGCTGTGCCTGCTGCGCGACTTCGCCTGG AAGTACGCCAAGCGCATGTACTGGCCGCAGACGTACCACCACATCCAGGAGATCCAGAAGTACAACATCCAAGAC TACCGACCGAGAATGGAGCAGTTCCAGAAGGCGATCCGCAAGGTGCGGCAGGTCCAGCGGATGCGTAAGCAGCGC GGCTACGCCTTCTCGCAGGCGGACGAGAGCCAGACGCGCGTGCTGCAGGCCTACGACACGACCAAGCACCGCGGG CGGTACGGCGAGATGGCCAGCTCGCGCCCGACGGGCGGCACCAAGTGA |
| Gene | >Hirsu2|6404 CTGACGCGAGGCGCGCAGTACACGTTCCAGAACGTCTTCTCCGGGCAGGTCATCTACGAGTCGTGGACGCTGTCG TTCTACAACGTCTTCTACACGGTGCTGCCGCCGCTGGCGCTCGGGATCCTGGACCAGTTCATCTCGGCGCGGCTG CTGGACCGGTACCCGCAGCTGTACATGATGGGCCAGAACAACTACTTCTTCCGGCTCAAGGTGTTCGCCGAGTGG ATCGCCAACGCCTTCTACCACTCGCTGGTGCTGTACGCGGCGACGCAGCTGATCTGGTACGGCGACCTGATCCAG GGCGACGGCAAGACGGCCGGGCACTGGGTGTGGGGGACGGCGCTGTACGGGGCGGTGCTGCTGACGGTGCTGGGC AAGGCGGCGCTGGTGACGAGCAACTGGACCAAGTACCACGTGCTGGCGATACCGGGCAGCATGGCGGTCTGGTAC GTCTTCATCGCGGCCTACGGGTCGCTGGGGCCCATGGCCGGGCTGTCGACCGAGTACCGCGGCGTGGTGCCGCGC CTGTACACGAGCCCCATCTTCTGGCTGCAGACGATGACGCTGGCGATGCTGTGCCTGCTGCGCGACTTCGCCTGG AAGTACGCCAAGCGCATGTACTGGCCGCAGACGTACCACCACATCCAGGAGATCCAGAAGTACAACATCCAAGAC TACCGACCGAGGTGAGCAGCCGTCTGTTTCTCTTTCGTTCCCGCCCCCCCTCGCGGGGCCGTCCCGTCGGAGAGA AAGGGGCGGCACCCGCAGGCAGGATAGGATCTCCGCTGACGTTGGGCTTCGCAGAATGGAGCAGTTCCAGAAGGC GATCCGCAAGGTGCGGCAGGTCCAGCGGATGCGTAAGCAGCGCGGCTACGCCTTCTCGCAGGCGGACGAGAGCCA GACGCGCGTGCTGCAGGCCTACGACACGACCAAGCACCGCGGGCGGTACGGCGAGATGGCCAGCTCGCGCCCGAC GGGCGGCACCAAGTGA |