Protein ID | Hirsu2|6384 |
Gene name | |
Location | Contig_327:10340..10848 |
Strand | + |
Gene length (bp) | 508 |
Transcript length (bp) | 423 |
Coding sequence length (bp) | 423 |
Protein length (aa) | 141 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0964 | 0.0587 | 0.9778 | 0.0978 | 0.0786 | 0.0176 | 0.1954 | 0.0617 | 0.2067 | 0.0032 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 27 | 0.999618 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 5 | 27 | 22 |
2 | 40 | 62 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 7085 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps australis 1348a (Ghana) | OphauG2|845 |
Ophiocordyceps australis map64 (Brazil) | OphauB2|8130 |
Ophiocordyceps subramaniannii | Hirsu2|6384 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6384 MHVTLAASTAMSLVCVLMLGSLQGAVAQPVSKAGLEARAGGGLFGGGGLFGGGGGGLFGGGGGGGGLGQILSDHR QFIQDPASSEDPIPADENNPAREAHRSVHAALFEATGGGLFGGNKSKGGGRGKASNNDNNDDDDN* |
Coding | >Hirsu2|6384 ATGCATGTCACTCTCGCTGCGTCCACTGCCATGTCCTTGGTCTGCGTCTTGATGCTCGGGTCGCTTCAGGGCGCA GTGGCACAACCCGTCAGCAAGGCTGGACTGGAGGCCCGCGCGGGAGGTGGCCTCTTTGGAGGAGGAGGCCTCTTT GGAGGAGGAGGAGGAGGCCTCTTTGGAGGAGGAGGAGGAGGAGGAGGCCTTGGGCAGATCCTCAGCGACCACAGA CAATTCATCCAGGACCCTGCGAGCTCCGAGGATCCGATCCCCGCGGACGAGAACAACCCGGCTCGTGAAGCCCAT CGCTCGGTCCATGCCGCGCTTTTCGAAGCCACCGGGGGCGGCCTATTCGGTGGGAATAAGAGCAAGGGAGGTGGT CGTGGCAAAGCTTCCAACAACGATAATAACGATGACGATGACAACTGA |
Transcript | >Hirsu2|6384 ATGCATGTCACTCTCGCTGCGTCCACTGCCATGTCCTTGGTCTGCGTCTTGATGCTCGGGTCGCTTCAGGGCGCA GTGGCACAACCCGTCAGCAAGGCTGGACTGGAGGCCCGCGCGGGAGGTGGCCTCTTTGGAGGAGGAGGCCTCTTT GGAGGAGGAGGAGGAGGCCTCTTTGGAGGAGGAGGAGGAGGAGGAGGCCTTGGGCAGATCCTCAGCGACCACAGA CAATTCATCCAGGACCCTGCGAGCTCCGAGGATCCGATCCCCGCGGACGAGAACAACCCGGCTCGTGAAGCCCAT CGCTCGGTCCATGCCGCGCTTTTCGAAGCCACCGGGGGCGGCCTATTCGGTGGGAATAAGAGCAAGGGAGGTGGT CGTGGCAAAGCTTCCAACAACGATAATAACGATGACGATGACAACTGA |
Gene | >Hirsu2|6384 ATGCATGTCACTCTCGCTGCGTCCACTGCCATGTCCTTGGTCTGCGTCTTGATGCTCGGGTCGCTTCAGGGCGCA GTGGCACAACCCGTCAGCAAGGGTACGTCTTCTCCTCCAAGCAAAGGTCTTTTGATTTGAAGCGTGAGGGTAAGA AGCAGGGCCGCTTACAAGTTTCCTCTCTACAGCTGGACTGGAGGCCCGCGCGGGAGGTGGCCTCTTTGGAGGAGG AGGCCTCTTTGGAGGAGGAGGAGGAGGCCTCTTTGGAGGAGGAGGAGGAGGAGGAGGCCTTGGGCAGATCCTCAG CGACCACAGACAATTCATCCAGGACCCTGCGAGCTCCGAGGATCCGATCCCCGCGGACGAGAACAACCCGGCTCG TGAAGCCCATCGCTCGGTCCATGCCGCGCTTTTCGAAGCCACCGGGGGCGGCCTATTCGGTGGGAATAAGAGCAA GGGAGGTGGTCGTGGCAAAGCTTCCAACAACGATAATAACGATGACGATGACAACTGA |