Protein ID | Hirsu2|6378 |
Gene name | |
Location | Contig_326:9282..11059 |
Strand | + |
Gene length (bp) | 1777 |
Transcript length (bp) | 1704 |
Coding sequence length (bp) | 1704 |
Protein length (aa) | 568 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00328 | His_Phos_2 | Histidine phosphatase superfamily (branch 2) | 4.5E-06 | 49 | 197 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cell membrane|Lysosome/Vacuole | Signal peptide|Transmembrane domain | 0.1023 | 0.0947 | 0.3599 | 0.5773 | 0.1206 | 0.0039 | 0.185 | 0.5944 | 0.3605 | 0.0224 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 22 | 0.985605 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 447 | 469 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 6206 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6378 MLPLLPSAALAAALTVVSAAGAEPDDVKVWAAIAYISHGERTPAMSDLQAVLTPEGAQQMWRQGAAFRTRYLTRT GNGTDMAPIQDIAVNAIDNSQLTVLSRTNEWVAAGAMAFMQGLYPPDEEALLVAAGGEDLSHDYTIGANSTDYPM KGYQYPSIRTVSNQDSSSVGLQGDVGCSAWQNEIQTNVEKNESVREKNQDLYQALFSTAPLEGLVPLARATYANA LDIYDLVSYMHAHNGTVFRGLANAGATVDTLRTLAFASERDKIARNDTKAGDPRAVLYSIAGRTLANQVVGQLTR TVAAVDGRGKLTLLFGSHRPLLSFLSIGGLLTRENLASGPMSRLPGPGAAIVFELVSDSGSGEAFPAASDLRVRF YYRATAGANETFAAYSLFGSGFGGTTIPYTSFVRGMTERATTATEWCRVCHVGAAAPWCVAKSSAKPRLSPVLGG VIGAVLTAALIGLVAVVCVTLRRRRAGRSDGAGARQSWYGFRGPQRRAADADVSTSKAGVREARTGSWEMRQGGR GDAPHSDTVGMISRDFDGASRRVEDEDSVSLTGAPVKARESV* |
Coding | >Hirsu2|6378 ATGCTTCCGCTTCTTCCCAGCGCCGCTCTTGCCGCTGCGCTCACGGTCGTCAGCGCCGCCGGCGCCGAGCCGGAC GACGTCAAAGTCTGGGCGGCGATCGCCTACATCAGCCATGGCGAGAGGACGCCTGCGATGAGCGACCTGCAGGCC GTGTTAACACCCGAGGGCGCCCAGCAGATGTGGAGGCAGGGCGCCGCGTTCCGCACCCGCTACCTGACGCGCACC GGCAACGGCACTGACATGGCCCCCATCCAGGACATTGCCGTGAACGCCATCGACAACAGCCAGCTCACTGTCCTG TCGCGGACCAATGAATGGGTTGCTGCCGGCGCCATGGCCTTTATGCAGGGCCTTTACCCACCAGACGAAGAGGCC CTCCTGGTCGCTGCCGGAGGCGAGGACCTGAGCCATGATTATACCATCGGGGCCAACAGCACAGACTATCCGATG AAAGGCTACCAGTACCCCTCGATCCGGACCGTCTCGAACCAGGACAGCTCATCAGTCGGGCTTCAGGGAGACGTC GGCTGTTCTGCCTGGCAGAACGAGATCCAGACGAACGTTGAAAAGAACGAAAGCGTGCGAGAAAAGAATCAAGAT CTTTATCAAGCGCTTTTCTCGACGGCTCCGTTGGAGGGGCTTGTTCCTCTGGCGCGGGCCACCTATGCGAACGCG CTCGACATATACGACCTGGTAAGCTATATGCACGCGCACAACGGCACGGTTTTCAGGGGCCTTGCCAATGCTGGA GCGACCGTCGATACCCTTCGAACCCTTGCCTTTGCCTCTGAACGCGACAAGATTGCCCGGAACGATACGAAGGCG GGCGACCCCCGCGCCGTGCTCTACAGCATCGCTGGACGGACTCTGGCCAACCAGGTTGTCGGGCAGCTGACGAGA ACAGTAGCGGCAGTCGATGGGAGAGGAAAGTTGACGCTACTGTTCGGCTCCCACAGGCCGCTGTTGTCATTCCTC TCCATCGGCGGGCTACTCACGAGGGAAAACTTGGCGTCCGGGCCAATGTCTCGCCTGCCGGGACCCGGGGCGGCC ATCGTATTCGAGCTCGTCTCGGACAGTGGATCCGGCGAGGCGTTTCCGGCCGCGAGCGACTTGAGGGTCCGCTTC TACTACAGGGCGACGGCCGGCGCGAACGAGACATTCGCAGCCTACTCGCTGTTCGGCTCTGGGTTCGGCGGCACC ACGATCCCCTACACGTCGTTCGTCCGCGGCATGACGGAACGCGCGACGACGGCGACCGAGTGGTGTCGGGTATGC CACGTTGGGGCGGCGGCGCCTTGGTGCGTGGCCAAGTCTTCAGCCAAGCCGAGGCTGAGCCCGGTCCTCGGGGGT GTCATCGGCGCAGTCTTGACGGCGGCCTTGATCGGGCTCGTCGCCGTCGTGTGCGTCACGCTCCGGAGACGGCGA GCGGGCCGGTCGGACGGAGCTGGCGCGAGGCAGTCTTGGTACGGCTTCCGGGGGCCGCAGAGGAGAGCAGCGGAC GCGGACGTGTCGACGTCCAAGGCGGGGGTGCGCGAGGCAAGGACGGGGAGCTGGGAGATGCGTCAGGGCGGCCGG GGGGACGCGCCGCACTCGGACACGGTCGGGATGATTTCGAGGGACTTTGACGGGGCGTCGCGGCGGGTCGAGGAC GAGGACAGCGTCAGTCTGACGGGGGCGCCGGTCAAGGCGAGGGAGAGCGTGTGA |
Transcript | >Hirsu2|6378 ATGCTTCCGCTTCTTCCCAGCGCCGCTCTTGCCGCTGCGCTCACGGTCGTCAGCGCCGCCGGCGCCGAGCCGGAC GACGTCAAAGTCTGGGCGGCGATCGCCTACATCAGCCATGGCGAGAGGACGCCTGCGATGAGCGACCTGCAGGCC GTGTTAACACCCGAGGGCGCCCAGCAGATGTGGAGGCAGGGCGCCGCGTTCCGCACCCGCTACCTGACGCGCACC GGCAACGGCACTGACATGGCCCCCATCCAGGACATTGCCGTGAACGCCATCGACAACAGCCAGCTCACTGTCCTG TCGCGGACCAATGAATGGGTTGCTGCCGGCGCCATGGCCTTTATGCAGGGCCTTTACCCACCAGACGAAGAGGCC CTCCTGGTCGCTGCCGGAGGCGAGGACCTGAGCCATGATTATACCATCGGGGCCAACAGCACAGACTATCCGATG AAAGGCTACCAGTACCCCTCGATCCGGACCGTCTCGAACCAGGACAGCTCATCAGTCGGGCTTCAGGGAGACGTC GGCTGTTCTGCCTGGCAGAACGAGATCCAGACGAACGTTGAAAAGAACGAAAGCGTGCGAGAAAAGAATCAAGAT CTTTATCAAGCGCTTTTCTCGACGGCTCCGTTGGAGGGGCTTGTTCCTCTGGCGCGGGCCACCTATGCGAACGCG CTCGACATATACGACCTGGTAAGCTATATGCACGCGCACAACGGCACGGTTTTCAGGGGCCTTGCCAATGCTGGA GCGACCGTCGATACCCTTCGAACCCTTGCCTTTGCCTCTGAACGCGACAAGATTGCCCGGAACGATACGAAGGCG GGCGACCCCCGCGCCGTGCTCTACAGCATCGCTGGACGGACTCTGGCCAACCAGGTTGTCGGGCAGCTGACGAGA ACAGTAGCGGCAGTCGATGGGAGAGGAAAGTTGACGCTACTGTTCGGCTCCCACAGGCCGCTGTTGTCATTCCTC TCCATCGGCGGGCTACTCACGAGGGAAAACTTGGCGTCCGGGCCAATGTCTCGCCTGCCGGGACCCGGGGCGGCC ATCGTATTCGAGCTCGTCTCGGACAGTGGATCCGGCGAGGCGTTTCCGGCCGCGAGCGACTTGAGGGTCCGCTTC TACTACAGGGCGACGGCCGGCGCGAACGAGACATTCGCAGCCTACTCGCTGTTCGGCTCTGGGTTCGGCGGCACC ACGATCCCCTACACGTCGTTCGTCCGCGGCATGACGGAACGCGCGACGACGGCGACCGAGTGGTGTCGGGTATGC CACGTTGGGGCGGCGGCGCCTTGGTGCGTGGCCAAGTCTTCAGCCAAGCCGAGGCTGAGCCCGGTCCTCGGGGGT GTCATCGGCGCAGTCTTGACGGCGGCCTTGATCGGGCTCGTCGCCGTCGTGTGCGTCACGCTCCGGAGACGGCGA GCGGGCCGGTCGGACGGAGCTGGCGCGAGGCAGTCTTGGTACGGCTTCCGGGGGCCGCAGAGGAGAGCAGCGGAC GCGGACGTGTCGACGTCCAAGGCGGGGGTGCGCGAGGCAAGGACGGGGAGCTGGGAGATGCGTCAGGGCGGCCGG GGGGACGCGCCGCACTCGGACACGGTCGGGATGATTTCGAGGGACTTTGACGGGGCGTCGCGGCGGGTCGAGGAC GAGGACAGCGTCAGTCTGACGGGGGCGCCGGTCAAGGCGAGGGAGAGCGTGTGA |
Gene | >Hirsu2|6378 ATGCTTCCGCTTCTTCCCAGCGCCGCTCTTGCCGCTGCGCTCACGGTCGTCAGCGCCGCCGGCGCCGAGCCGGAC GACGTCAAAGTCTGGGCGGCGATCGCCTACATCAGCCATGGCGAGAGGACGCCTGCGATGAGCGACCTGCAGGCC GTGTTAACACCCGAGGGCGCCCAGCAGATGTGGAGGCAGGGCGCCGCGTTCCGCACCCGCTACCTGACGCGCACC GGCAACGGCACTGACATGGCCCCCATCCAGGACATTGCCGTGAACGCCATCGACAACAGCCAGCTCACTGTCCTG TCGCGGACCAATGAATGGGTTGCTGCCGGCGCCATGGCCTTTATGCAGGGCCTTTACCCACCAGACGAAGAGGCC CTCCTGGTCGCTGCCGGAGGCGAGGACCTGAGCCATGATTATACCATCGGGGCCAACAGCACAGACTATCCGATG AAAGGCTACCAGTACCCCTCGATCCGGACCGTCTCGAACCAGGACAGCTCATCAGTCGGGTGCGTGCTGCCTCGC GCTCCGATGACCGGTGGCGGGTTCAGCCAGCCCAGTCACGCTGACATGGTCTGCCAGGCTTCAGGGAGACGTCGG CTGTTCTGCCTGGCAGAACGAGATCCAGACGAACGTTGAAAAGAACGAAAGCGTGCGAGAAAAGAATCAAGATCT TTATCAAGCGCTTTTCTCGACGGCTCCGTTGGAGGGGCTTGTTCCTCTGGCGCGGGCCACCTATGCGAACGCGCT CGACATATACGACCTGGTAAGCTATATGCACGCGCACAACGGCACGGTTTTCAGGGGCCTTGCCAATGCTGGAGC GACCGTCGATACCCTTCGAACCCTTGCCTTTGCCTCTGAACGCGACAAGATTGCCCGGAACGATACGAAGGCGGG CGACCCCCGCGCCGTGCTCTACAGCATCGCTGGACGGACTCTGGCCAACCAGGTTGTCGGGCAGCTGACGAGAAC AGTAGCGGCAGTCGATGGGAGAGGAAAGTTGACGCTACTGTTCGGCTCCCACAGGCCGCTGTTGTCATTCCTCTC CATCGGCGGGCTACTCACGAGGGAAAACTTGGCGTCCGGGCCAATGTCTCGCCTGCCGGGACCCGGGGCGGCCAT CGTATTCGAGCTCGTCTCGGACAGTGGATCCGGCGAGGCGTTTCCGGCCGCGAGCGACTTGAGGGTCCGCTTCTA CTACAGGGCGACGGCCGGCGCGAACGAGACATTCGCAGCCTACTCGCTGTTCGGCTCTGGGTTCGGCGGCACCAC GATCCCCTACACGTCGTTCGTCCGCGGCATGACGGAACGCGCGACGACGGCGACCGAGTGGTGTCGGGTATGCCA CGTTGGGGCGGCGGCGCCTTGGTGCGTGGCCAAGTCTTCAGCCAAGCCGAGGCTGAGCCCGGTCCTCGGGGGTGT CATCGGCGCAGTCTTGACGGCGGCCTTGATCGGGCTCGTCGCCGTCGTGTGCGTCACGCTCCGGAGACGGCGAGC GGGCCGGTCGGACGGAGCTGGCGCGAGGCAGTCTTGGTACGGCTTCCGGGGGCCGCAGAGGAGAGCAGCGGACGC GGACGTGTCGACGTCCAAGGCGGGGGTGCGCGAGGCAAGGACGGGGAGCTGGGAGATGCGTCAGGGCGGCCGGGG GGACGCGCCGCACTCGGACACGGTCGGGATGATTTCGAGGGACTTTGACGGGGCGTCGCGGCGGGTCGAGGACGA GGACAGCGTCAGTCTGACGGGGGCGCCGGTCAAGGCGAGGGAGAGCGTGTGA |