Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6350
Gene name
LocationContig_324:5271..6317
Strand-
Gene length (bp)1046
Transcript length (bp)972
Coding sequence length (bp)972
Protein length (aa) 324

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14214 Helitron_like_N Helitron helicase-like domain at N-terminus 4.8E-16 1 103

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6350
MSRESRLSMRKKILSLIIRHGVPAIWFTLNPNDITNLVKLRLAAHLGRDPDEAEAFLRDLGTAYERTRLAISDPM
SSAVFFHREMTLFFEHYVNVGEESVFGHGNAGLSEALAGPGAEEQAAYRERIVRYVDSVFSEVRRPPYDDPHAHA
PAPAPVPRALSGADRGARAEPRPQELDAEGYCAVQAERSATADISSRLDDVARFTDTFDEEANFCAGATQIHTHS
ATCVKYSIGAGARKGDLCRFKAPSRLVERTALTADGVLEIRRTHSMVNRWNRAMAVGLRHNHDISFIATQRKTMA
LVHYITNYATKVEDPVWKRVAVK*
Coding >Hirsu2|6350
ATGTCGAGGGAGAGCCGGCTTAGTATGCGGAAGAAGATACTATCCCTCATCATAAGGCACGGGGTGCCGGCCATC
TGGTTCACGCTGAACCCGAACGACATCACGAACCTGGTAAAGTTACGGCTGGCGGCGCACCTTGGCCGCGACCCC
GACGAGGCCGAGGCCTTCCTGAGAGACCTGGGGACCGCGTACGAGCGGACGCGGCTGGCCATATCGGACCCGATG
AGCTCGGCCGTCTTCTTCCACCGGGAGATGACGCTCTTTTTCGAGCACTACGTCAACGTCGGGGAGGAGTCGGTG
TTCGGACACGGCAACGCGGGTCTCAGCGAGGCGCTAGCCGGCCCCGGCGCGGAGGAGCAGGCGGCGTACCGGGAG
CGCATCGTCCGCTACGTAGATAGCGTCTTCTCCGAGGTAAGGCGGCCGCCTTACGATGATCCCCACGCCCACGCC
CCCGCCCCCGCCCCCGTCCCCAGGGCCCTATCCGGGGCAGACCGAGGGGCCCGAGCTGAACCGAGGCCGCAGGAG
TTAGACGCGGAAGGTTACTGCGCCGTGCAGGCGGAGCGGTCGGCCACGGCGGACATATCGTCGCGGCTCGACGAC
GTCGCGCGCTTCACAGACACCTTCGACGAGGAGGCCAACTTCTGCGCGGGCGCGACGCAGATCCACACGCATAGC
GCGACCTGCGTAAAATACTCGATCGGCGCGGGGGCGCGGAAGGGGGATCTCTGCCGCTTCAAGGCGCCGTCGAGG
CTGGTGGAGAGGACGGCGCTGACGGCGGACGGGGTGCTCGAGATCCGGCGGACACACAGCATGGTGAACCGGTGG
AACAGGGCGATGGCCGTAGGGCTACGGCACAACCACGACATCTCGTTCATCGCGACGCAGCGCAAGACGATGGCT
CTCGTCCATTACATCACGAACTACGCGACCAAGGTAGAGGACCCGGTGTGGAAGCGGGTCGCCGTAAAATAA
Transcript >Hirsu2|6350
ATGTCGAGGGAGAGCCGGCTTAGTATGCGGAAGAAGATACTATCCCTCATCATAAGGCACGGGGTGCCGGCCATC
TGGTTCACGCTGAACCCGAACGACATCACGAACCTGGTAAAGTTACGGCTGGCGGCGCACCTTGGCCGCGACCCC
GACGAGGCCGAGGCCTTCCTGAGAGACCTGGGGACCGCGTACGAGCGGACGCGGCTGGCCATATCGGACCCGATG
AGCTCGGCCGTCTTCTTCCACCGGGAGATGACGCTCTTTTTCGAGCACTACGTCAACGTCGGGGAGGAGTCGGTG
TTCGGACACGGCAACGCGGGTCTCAGCGAGGCGCTAGCCGGCCCCGGCGCGGAGGAGCAGGCGGCGTACCGGGAG
CGCATCGTCCGCTACGTAGATAGCGTCTTCTCCGAGGTAAGGCGGCCGCCTTACGATGATCCCCACGCCCACGCC
CCCGCCCCCGCCCCCGTCCCCAGGGCCCTATCCGGGGCAGACCGAGGGGCCCGAGCTGAACCGAGGCCGCAGGAG
TTAGACGCGGAAGGTTACTGCGCCGTGCAGGCGGAGCGGTCGGCCACGGCGGACATATCGTCGCGGCTCGACGAC
GTCGCGCGCTTCACAGACACCTTCGACGAGGAGGCCAACTTCTGCGCGGGCGCGACGCAGATCCACACGCATAGC
GCGACCTGCGTAAAATACTCGATCGGCGCGGGGGCGCGGAAGGGGGATCTCTGCCGCTTCAAGGCGCCGTCGAGG
CTGGTGGAGAGGACGGCGCTGACGGCGGACGGGGTGCTCGAGATCCGGCGGACACACAGCATGGTGAACCGGTGG
AACAGGGCGATGGCCGTAGGGCTACGGCACAACCACGACATCTCGTTCATCGCGACGCAGCGCAAGACGATGGCT
CTCGTCCATTACATCACGAACTACGCGACCAAGGTAGAGGACCCGGTGTGGAAGCGGGTCGCCGTAAAATAA
Gene >Hirsu2|6350
ATGTCGAGGGAGAGCCGGCTTAGTATGCGGAAGAAGATACTATCCCTCATCATAAGGCACGGGGTGCCGGCCATC
TGGTTCACGCTGAACCCGAACGACATCACGAACCTGGTAAAGTTACGGCTGGCGGCGCACCTTGGCCGCGACCCC
GACGAGGCCGAGGCCTTCCTGAGAGACCTGGGGACCGCGTACGAGCGGACGCGGCTGGCCATATCGGACCCGATG
AGCTCGGCCGTCTTCTTCCACCGGGAGATGACGCTCTTTTTCGAGCACTACGTCAACGTCGGGGAGGAGTCGGTG
TTCGGACACGTCGGCGCGTACTACGGGGCGGTCGAGACCAACGAGCGAGGCGCTCTCACATCCACGGGCTCCTCT
GGCTCAAGGGCAACGCGGGTCTCAGCGAGGCGCTAGCCGGCCCCGGCGCGGAGGAGCAGGCGGCGTACCGGGAGC
GCATCGTCCGCTACGTAGATAGCGTCTTCTCCGAGGTAAGGCGGCCGCCTTACGATGATCCCCACGCCCACGCCC
CCGCCCCCGCCCCCGTCCCCAGGGCCCTATCCGGGGCAGACCGAGGGGCCCGAGCTGAACCGAGGCCGCAGGAGT
TAGACGCGGAAGGTTACTGCGCCGTGCAGGCGGAGCGGTCGGCCACGGCGGACATATCGTCGCGGCTCGACGACG
TCGCGCGCTTCACAGACACCTTCGACGAGGAGGCCAACTTCTGCGCGGGCGCGACGCAGATCCACACGCATAGCG
CGACCTGCGTAAAATACTCGATCGGCGCGGGGGCGCGGAAGGGGGATCTCTGCCGCTTCAAGGCGCCGTCGAGGC
TGGTGGAGAGGACGGCGCTGACGGCGGACGGGGTGCTCGAGATCCGGCGGACACACAGCATGGTGAACCGGTGGA
ACAGGGCGATGGCCGTAGGGCTACGGCACAACCACGACATCTCGTTCATCGCGACGCAGCGCAAGACGATGGCTC
TCGTCCATTACATCACGAACTACGCGACCAAGGTAGAGGACCCGGTGTGGAAGCGGGTCGCCGTAAAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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