Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6332
Gene name
LocationContig_323:7871..8912
Strand-
Gene length (bp)1041
Transcript length (bp)804
Coding sequence length (bp)804
Protein length (aa) 268

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02544 Steroid_dh 3-oxo-5-alpha-steroid 4-dehydrogenase 4.6E-20 99 267

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9UT20|YFY8_SCHPO Uncharacterized protein C9.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC9.08c PE=3 SV=1 24 264 6.0E-39
sp|Q68FF9|S5A1_MOUSE 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Mus musculus GN=Srd5a1 PE=2 SV=2 6 264 1.0E-21
sp|P24008|S5A1_RAT 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Rattus norvegicus GN=Srd5a1 PE=1 SV=2 32 266 3.0E-21
sp|A5PJS2|S5A1_BOVIN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Bos taurus GN=SRD5A1 PE=2 SV=1 27 251 2.0E-19
sp|P18405|S5A1_HUMAN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Homo sapiens GN=SRD5A1 PE=1 SV=1 24 251 6.0E-19
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9UT20|YFY8_SCHPO Uncharacterized protein C9.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC9.08c PE=3 SV=1 24 264 6.0E-39
sp|Q68FF9|S5A1_MOUSE 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Mus musculus GN=Srd5a1 PE=2 SV=2 6 264 1.0E-21
sp|P24008|S5A1_RAT 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Rattus norvegicus GN=Srd5a1 PE=1 SV=2 32 266 3.0E-21
sp|A5PJS2|S5A1_BOVIN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Bos taurus GN=SRD5A1 PE=2 SV=1 27 251 2.0E-19
sp|P18405|S5A1_HUMAN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Homo sapiens GN=SRD5A1 PE=1 SV=1 24 251 6.0E-19
sp|Q5K2N1|DET2_SOLLC Steroid 5-alpha-reductase DET2 OS=Solanum lycopersicum GN=DET2 PE=1 SV=1 6 264 2.0E-18
sp|Q28891|S5A1_MACFA 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Macaca fascicularis GN=SRD5A1 PE=1 SV=1 24 251 1.0E-17
sp|Q2QDF6|DET2_GOSHI Steroid 5-alpha-reductase DET2 OS=Gossypium hirsutum GN=DET2 PE=1 SV=1 39 267 6.0E-14
sp|O18765|S5A2_PIG 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Sus scrofa GN=SRD5A2 PE=2 SV=2 22 267 3.0E-13
sp|P31213|S5A2_HUMAN 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Homo sapiens GN=SRD5A2 PE=1 SV=1 16 267 4.0E-13
sp|Q38944|DET2_ARATH Steroid 5-alpha-reductase DET2 OS=Arabidopsis thaliana GN=DET2 PE=1 SV=2 39 267 4.0E-13
sp|Q28892|S5A2_MACFA 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Macaca fascicularis GN=SRD5A2 PE=1 SV=1 16 267 9.0E-13
sp|Q99N99|S5A2_MOUSE 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Mus musculus GN=Srd5a2 PE=2 SV=1 21 267 9.0E-13
sp|P31214|S5A2_RAT 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Rattus norvegicus GN=Srd5a2 PE=1 SV=1 21 267 1.0E-10
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GO

GO Term Description Terminal node
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Yes
GO:0006629 lipid metabolic process Yes
GO:0016491 oxidoreductase activity No
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0003674 molecular_function No
GO:0071704 organic substance metabolic process No
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 102 124 22
2 139 158 19
3 208 230 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6332
MRVWQLGFPILGSMQWVIRWYGMGKTSTPSRLNLPGRAAWLTMEAPGFMTLLYVMRTMPAMHGVEDLPWQNRVLA
GLFVIHYTYRAVLFPLLQPSMAPIHLYVWAMAVAFQLCNATCLGSWLAAYGPTTAEAWAAQSPLPQFVAGLAVFY
AGLAANFFHDEELREIRRRRNKKQAASSGKGEGARSYYEIPQAGLFRYMLFPHYFCEWIEWAGFLMAAGWSCAPA
WAFLVNEVFSMLPRAVRGKAWYVERFGADKIGNKWAVIPGVW*
Coding >Hirsu2|6332
ATGAGGGTCTGGCAGCTTGGCTTTCCCATTCTCGGGTCGATGCAATGGGTCATCCGATGGTACGGCATGGGCAAG
ACGTCGACGCCCAGCCGGCTCAACCTACCTGGGCGGGCGGCATGGCTGACGATGGAGGCGCCCGGGTTCATGACG
CTGCTGTACGTCATGCGGACGATGCCGGCGATGCACGGCGTCGAGGACCTGCCGTGGCAGAACCGCGTCCTGGCC
GGCCTGTTTGTGATCCACTACACGTACCGCGCCGTGCTCTTCCCGCTGCTGCAGCCGTCGATGGCGCCCATCCAC
CTGTACGTCTGGGCCATGGCCGTGGCCTTCCAGCTGTGCAACGCCACCTGCCTGGGCTCGTGGCTGGCGGCGTAC
GGGCCGACGACGGCCGAGGCCTGGGCGGCGCAGTCGCCGCTGCCGCAGTTCGTCGCCGGCCTGGCCGTCTTCTAC
GCCGGCCTGGCCGCCAACTTCTTTCACGACGAGGAGCTGCGCGAGATCCGTCGGCGGCGGAACAAGAAGCAGGCA
GCGTCCTCCGGCAAGGGTGAGGGCGCAAGGTCGTACTACGAGATCCCCCAGGCCGGCCTCTTCCGCTACATGCTC
TTCCCGCACTACTTCTGCGAGTGGATCGAGTGGGCCGGCTTCCTCATGGCCGCCGGCTGGTCGTGCGCCCCGGCC
TGGGCCTTCCTCGTCAACGAGGTCTTCTCGATGCTGCCGCGGGCCGTGCGCGGCAAGGCCTGGTACGTCGAGCGC
TTCGGCGCCGACAAGATCGGCAACAAGTGGGCTGTCATCCCGGGCGTCTGGTGA
Transcript >Hirsu2|6332
ATGAGGGTCTGGCAGCTTGGCTTTCCCATTCTCGGGTCGATGCAATGGGTCATCCGATGGTACGGCATGGGCAAG
ACGTCGACGCCCAGCCGGCTCAACCTACCTGGGCGGGCGGCATGGCTGACGATGGAGGCGCCCGGGTTCATGACG
CTGCTGTACGTCATGCGGACGATGCCGGCGATGCACGGCGTCGAGGACCTGCCGTGGCAGAACCGCGTCCTGGCC
GGCCTGTTTGTGATCCACTACACGTACCGCGCCGTGCTCTTCCCGCTGCTGCAGCCGTCGATGGCGCCCATCCAC
CTGTACGTCTGGGCCATGGCCGTGGCCTTCCAGCTGTGCAACGCCACCTGCCTGGGCTCGTGGCTGGCGGCGTAC
GGGCCGACGACGGCCGAGGCCTGGGCGGCGCAGTCGCCGCTGCCGCAGTTCGTCGCCGGCCTGGCCGTCTTCTAC
GCCGGCCTGGCCGCCAACTTCTTTCACGACGAGGAGCTGCGCGAGATCCGTCGGCGGCGGAACAAGAAGCAGGCA
GCGTCCTCCGGCAAGGGTGAGGGCGCAAGGTCGTACTACGAGATCCCCCAGGCCGGCCTCTTCCGCTACATGCTC
TTCCCGCACTACTTCTGCGAGTGGATCGAGTGGGCCGGCTTCCTCATGGCCGCCGGCTGGTCGTGCGCCCCGGCC
TGGGCCTTCCTCGTCAACGAGGTCTTCTCGATGCTGCCGCGGGCCGTGCGCGGCAAGGCCTGGTACGTCGAGCGC
TTCGGCGCCGACAAGATCGGCAACAAGTGGGCTGTCATCCCGGGCGTCTGGTGA
Gene >Hirsu2|6332
ATGAGGGTCTGGCAGCTTGGCTTTCCCATTGTGCGTTCCCGCTGCTCTTCTGTTCCTCTCTCCTCTCCCCTCCTC
TGCTCTGTTCACTTGTTACTCCTTGTTCTGCTCTTCTTGCTCCCCTTTCTTCGACTCTGCTCTGTTGTTCTTTGG
GCGGCTGACGACGAACGGCACAGCTCGGGTCGATGCAATGGGTCATCCGATGGTACGGCATGGGCAAGACGTCGA
CGCCCAGCCGGCTCAACCTACCTGGGCGGGCGGCATGGCTGACGATGGAGGCGCCCGGGTTCATGACGCTGCTGT
ACGTCATGCGGACGATGCCGGCGATGCACGGCGTCGAGGACCTGCCGTGGCAGAACCGCGTCCTGGCCGGCCTGT
TTGTACGCCCCCCATTCTCTCCCCTTCTCTCGTCCCCCGGCCCGGTGTCGAGCTGGGAAAGGAAGGGCGAGGCTG
ACGCGGGCCATAAACGCACAGGTGATCCACTACACGTACCGCGCCGTGCTCTTCCCGCTGCTGCAGCCGTCGATG
GCGCCCATCCACCTGTACGTCTGGGCCATGGCCGTGGCCTTCCAGCTGTGCAACGCCACCTGCCTGGGCTCGTGG
CTGGCGGCGTACGGGCCGACGACGGCCGAGGCCTGGGCGGCGCAGTCGCCGCTGCCGCAGTTCGTCGCCGGCCTG
GCCGTCTTCTACGCCGGCCTGGCCGCCAACTTCTTTCACGACGAGGAGCTGCGCGAGATCCGTCGGCGGCGGAAC
AAGAAGCAGGCAGCGTCCTCCGGCAAGGGTGAGGGCGCAAGGTCGTACTACGAGATCCCCCAGGCCGGCCTCTTC
CGCTACATGCTCTTCCCGCACTACTTCTGCGAGTGGATCGAGTGGGCCGGCTTCCTCATGGCCGCCGGCTGGTCG
TGCGCCCCGGCCTGGGCCTTCCTCGTCAACGAGGTCTTCTCGATGCTGCCGCGGGCCGTGCGCGGCAAGGCCTGG
TACGTCGAGCGCTTCGGCGCCGACAAGATCGGCAACAAGTGGGCTGTCATCCCGGGCGTCTGGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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