Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6320
Gene name
LocationContig_322:13516..15355
Strand+
Gene length (bp)1839
Transcript length (bp)1494
Coding sequence length (bp)1494
Protein length (aa) 498

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 4.0E-31 56 398

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 1 497 1.0E-165
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 15 497 1.0E-60
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 40 475 3.0E-59
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 39 469 1.0E-56
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 35 497 2.0E-51
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Swissprot ID Swissprot Description Start End E-value
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 1 497 1.0E-165
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 15 497 1.0E-60
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 40 475 3.0E-59
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 39 469 1.0E-56
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 35 497 2.0E-51
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 5 469 6.0E-38
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 10 468 2.0E-36
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 16 497 2.0E-35
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 46 468 3.0E-35
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 40 469 3.0E-33
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 46 485 1.0E-29
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 29 466 2.0E-28
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 40 483 6.0E-28
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 40 341 2.0E-27
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 28 497 1.0E-26
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 35 439 2.0E-24
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 34 341 4.0E-24
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 40 473 9.0E-24
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 39 346 3.0E-22
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 37 439 9.0E-21
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 39 377 3.0E-19
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 46 307 2.0E-15
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 40 231 7.0E-15
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 46 336 8.0E-15
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 41 238 6.0E-13
sp|Q6NMN6|SPNS1_ARATH Probable sphingolipid transporter spinster homolog 1 OS=Arabidopsis thaliana GN=At5g65687 PE=1 SV=1 15 245 5.0E-10
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 140 238 7.0E-10
sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 51 326 4.0E-09
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0031224 intrinsic component of membrane No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0051179 localization No
GO:0051234 establishment of localization No
GO:0044425 membrane part No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 58 0.5

Transmembrane Domains

Domain # Start End Length
1 89 108 19
2 118 140 22
3 147 169 22
4 179 201 22
5 208 230 22
6 316 333 17
7 340 362 22
8 372 394 22
9 407 426 19
10 439 461 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6320
MAAPETGIKPDEEGRLGPVSSPGKDGVLAETARVVDPAAERRLCFKFDIRILPVLAVMYLFNSLDKGNLSNAQTN
GLSKDLGFKDGQYNLVVSIFFVPFVLFAPPVAMLSKKFGPARALPLMMAVFGSMTLLTAAAHNFSAVFALRWFLG
MAEAAFFPVVIYYLTTFYRRGELARRLAIFYAASNLANAFSGLLAFGVFHIRSSLTSWRYLFLIEGAATVSFAAV
AFWYLPPSAAEARFLDDDERALAFHRIQVDSSAVVEERFRLRDSLAILTYPSSIAFLAIEVCLGVPLQSVALFLP
QIIQRLGYSTVQTNLYTVAPNATGAVMLLVLAFCSDWTRLRFPFIVLGYAFTFVGFIIYATIDRVEAQIRLAYFA
TFMMCWGTSAPSVILSAWFNNNIAHEGRRVTLTSVGVPLANAMGLVASNVFRERDAPKYAPALITTASFGAAGAF
ITTCLGAYMIFDNKRRDRKAGVRVDPRDIPTQRLRDGPSVEEFRWFL*
Coding >Hirsu2|6320
ATGGCCGCCCCCGAGACGGGCATCAAGCCGGACGAGGAGGGCCGGCTGGGCCCCGTGTCGAGCCCGGGCAAGGAC
GGCGTCTTGGCGGAGACGGCGCGGGTGGTCGACCCGGCGGCCGAGCGCCGGCTGTGCTTCAAGTTTGACATTCGC
ATCTTGCCCGTGCTGGCCGTCATGTATCTGTTCAATTCCCTCGACAAGGGCAACCTGAGCAACGCGCAGACCAAT
GGCCTCAGCAAAGATCTCGGGTTCAAGGACGGGCAGTACAACCTGGTCGTGTCCATCTTCTTCGTCCCCTTCGTC
CTGTTCGCGCCGCCGGTGGCGATGCTGAGCAAGAAGTTCGGCCCGGCGCGGGCGCTGCCGCTGATGATGGCCGTC
TTCGGCAGCATGACGCTGCTGACGGCGGCCGCCCACAACTTCTCGGCCGTCTTCGCCCTGCGCTGGTTCCTGGGC
ATGGCCGAGGCCGCCTTCTTCCCCGTCGTCATCTACTACCTGACCACCTTCTACCGGCGCGGCGAGCTGGCCCGG
CGGCTGGCCATCTTCTACGCGGCCTCGAACCTGGCCAACGCCTTCAGCGGCCTGCTGGCCTTTGGCGTCTTCCAC
ATCCGCTCCAGCCTGACGTCGTGGCGCTACCTGTTCCTGATCGAGGGCGCCGCCACCGTCAGCTTCGCCGCCGTC
GCCTTCTGGTATCTGCCGCCCAGCGCGGCCGAGGCGCGCTTCCTCGACGACGACGAGCGCGCCCTGGCCTTCCAC
CGGATCCAGGTCGACTCGTCGGCCGTCGTCGAGGAGCGCTTCCGCCTGCGCGACTCGCTCGCCATCCTCACCTAC
CCGTCCTCCATCGCCTTCCTGGCCATCGAGGTCTGCCTCGGCGTGCCGCTGCAGTCCGTCGCCCTCTTCCTGCCC
CAGATCATCCAGCGGCTCGGCTACTCGACCGTCCAGACCAACCTGTACACGGTCGCGCCCAATGCCACCGGCGCC
GTCATGCTGCTGGTCCTGGCCTTTTGCTCCGACTGGACGCGCCTGCGCTTCCCCTTTATCGTTCTTGGCTACGCC
TTCACCTTTGTCGGCTTCATCATCTACGCCACCATCGACCGCGTCGAGGCCCAGATCCGGCTGGCCTACTTCGCC
ACCTTCATGATGTGCTGGGGCACCTCGGCCCCGTCCGTCATCCTGTCCGCCTGGTTCAACAACAACATCGCCCAC
GAGGGCCGCCGCGTCACCCTGACCTCGGTCGGCGTGCCCCTGGCCAACGCCATGGGCCTGGTCGCCAGCAACGTC
TTCCGCGAGCGCGACGCACCAAAGTACGCGCCCGCCCTCATCACCACCGCCAGCTTCGGCGCCGCCGGCGCCTTC
ATCACCACCTGCCTCGGCGCCTACATGATCTTCGACAACAAGAGGCGCGACCGCAAGGCCGGCGTCCGCGTCGAC
CCCCGCGACATCCCGACCCAACGGCTGAGGGACGGCCCGAGCGTCGAGGAATTCCGATGGTTCCTTTAG
Transcript >Hirsu2|6320
ATGGCCGCCCCCGAGACGGGCATCAAGCCGGACGAGGAGGGCCGGCTGGGCCCCGTGTCGAGCCCGGGCAAGGAC
GGCGTCTTGGCGGAGACGGCGCGGGTGGTCGACCCGGCGGCCGAGCGCCGGCTGTGCTTCAAGTTTGACATTCGC
ATCTTGCCCGTGCTGGCCGTCATGTATCTGTTCAATTCCCTCGACAAGGGCAACCTGAGCAACGCGCAGACCAAT
GGCCTCAGCAAAGATCTCGGGTTCAAGGACGGGCAGTACAACCTGGTCGTGTCCATCTTCTTCGTCCCCTTCGTC
CTGTTCGCGCCGCCGGTGGCGATGCTGAGCAAGAAGTTCGGCCCGGCGCGGGCGCTGCCGCTGATGATGGCCGTC
TTCGGCAGCATGACGCTGCTGACGGCGGCCGCCCACAACTTCTCGGCCGTCTTCGCCCTGCGCTGGTTCCTGGGC
ATGGCCGAGGCCGCCTTCTTCCCCGTCGTCATCTACTACCTGACCACCTTCTACCGGCGCGGCGAGCTGGCCCGG
CGGCTGGCCATCTTCTACGCGGCCTCGAACCTGGCCAACGCCTTCAGCGGCCTGCTGGCCTTTGGCGTCTTCCAC
ATCCGCTCCAGCCTGACGTCGTGGCGCTACCTGTTCCTGATCGAGGGCGCCGCCACCGTCAGCTTCGCCGCCGTC
GCCTTCTGGTATCTGCCGCCCAGCGCGGCCGAGGCGCGCTTCCTCGACGACGACGAGCGCGCCCTGGCCTTCCAC
CGGATCCAGGTCGACTCGTCGGCCGTCGTCGAGGAGCGCTTCCGCCTGCGCGACTCGCTCGCCATCCTCACCTAC
CCGTCCTCCATCGCCTTCCTGGCCATCGAGGTCTGCCTCGGCGTGCCGCTGCAGTCCGTCGCCCTCTTCCTGCCC
CAGATCATCCAGCGGCTCGGCTACTCGACCGTCCAGACCAACCTGTACACGGTCGCGCCCAATGCCACCGGCGCC
GTCATGCTGCTGGTCCTGGCCTTTTGCTCCGACTGGACGCGCCTGCGCTTCCCCTTTATCGTTCTTGGCTACGCC
TTCACCTTTGTCGGCTTCATCATCTACGCCACCATCGACCGCGTCGAGGCCCAGATCCGGCTGGCCTACTTCGCC
ACCTTCATGATGTGCTGGGGCACCTCGGCCCCGTCCGTCATCCTGTCCGCCTGGTTCAACAACAACATCGCCCAC
GAGGGCCGCCGCGTCACCCTGACCTCGGTCGGCGTGCCCCTGGCCAACGCCATGGGCCTGGTCGCCAGCAACGTC
TTCCGCGAGCGCGACGCACCAAAGTACGCGCCCGCCCTCATCACCACCGCCAGCTTCGGCGCCGCCGGCGCCTTC
ATCACCACCTGCCTCGGCGCCTACATGATCTTCGACAACAAGAGGCGCGACCGCAAGGCCGGCGTCCGCGTCGAC
CCCCGCGACATCCCGACCCAACGGCTGAGGGACGGCCCGAGCGTCGAGGAATTCCGATGGTTCCTTTAG
Gene >Hirsu2|6320
ATGGCCGCCCCCGAGACGGGCATCAAGCCGGACGAGGAGGGCCGGCTGGGCCCCGTGTCGAGCCCGGGCAAGGAC
GGCGTCTTGGCGGAGACGGCGCGGGTGGTCGACCCGGCGGCCGAGCGCCGGCTGTGCTTCAAGTTTGACATTCGC
ATCTTGCCCGTGCTGGCCGTCATGTGTAAGTCGGCCGAGCTGGGTCCGAGGGGGCTTGTGGTGTCGCTGACGGGG
GACCAGATCTGTTCAATTCCCTCGACAAGGGCAACCTGAGCAACGCGCAGACCAATGGCCTCAGCAAAGGTGACT
GTCCGGCCTTTCTTTTCTCTCCTCTTTTCCTTCTCTTACAGGCCAGGCCGCTTCTCTCTTTCCTATCTCTCCTTC
CCCTCTCTGTCTCTCTCTCTGCCCATCTCTCTCTCTGCTTCTCTCTCTCTTTCTGTCTCTCTCTCTTTCTGTCTT
TCTCTCTCTTTCTTTCTGTCTCTCTCTCTTTCTGTCTCTCTCACCTTCTGTCTCTCTCTCTCGCTCTCTCTCTCT
CTCTCTCTCTCGGCGGCTTCTCCTTTCCCGGCGTACTGACATCTAGATCGCCCGGCAGATCTCGGGTTCAAGGAC
GGGCAGTACAACCTGGTCGTGTCCATCTTCTTCGTCCCCTTCGTCCTGTTCGCGCCGCCGGTGGCGATGCTGAGC
AAGAAGTTCGGCCCGGCGCGGGCGCTGCCGCTGATGATGGCCGTCTTCGGCAGCATGACGCTGCTGACGGCGGCC
GCCCACAACTTCTCGGCCGTCTTCGCCCTGCGCTGGTTCCTGGGCATGGCCGAGGCCGCCTTCTTCCCCGTCGTC
ATCTACTACCTGACCACCTTCTACCGGCGCGGCGAGCTGGCCCGGCGGCTGGCCATCTTCTACGCGGCCTCGAAC
CTGGCCAACGCCTTCAGCGGCCTGCTGGCCTTTGGCGTCTTCCACATCCGCTCCAGCCTGACGTCGTGGCGCTAC
CTGTTCCTGATCGAGGGCGCCGCCACCGTCAGCTTCGCCGCCGTCGCCTTCTGGTATCTGCCGCCCAGCGCGGCC
GAGGCGCGCTTCCTCGACGACGACGAGCGCGCCCTGGCCTTCCACCGGATCCAGGTCGACTCGTCGGCCGTCGTC
GAGGAGCGCTTCCGCCTGCGCGACTCGCTCGCCATCCTCACCTACCCGTCCTCCATCGCCTTCCTGGCCATCGAG
GTCTGCCTCGGCGTGCCGCTGCAGTCCGTCGCCCTCTTCCTGCCCCAGATCATCCAGCGGCTCGGCTACTCGACC
GTCCAGACCAACCTGTACACGGTCGCGCCCAATGCCACCGGCGCCGTCATGCTGCTGGTCCTGGCCTTTTGCTCC
GACTGGACGCGCCTGCGCTTCCCCTTTATCGTTCTTGGCTACGCCTTCACCTTTGTCGGCTTCATCATCTACGCC
ACCATCGACCGCGTCGAGGCCCAGATCCGGCTGGCCTACTTCGCCACCTTCATGATGTGCTGGGGCACCTCGGCC
CCGTCCGTCATCCTGTCCGCCTGGTTCAACAACAACATCGCCCACGAGGGCCGCCGCGTCACCCTGACCTCGGTC
GGCGTGCCCCTGGCCAACGCCATGGGCCTGGTCGCCAGCAACGTCTTCCGCGAGCGCGACGCACCAAAGTACGCG
CCCGCCCTCATCACCACCGCCAGCTTCGGCGCCGCCGGCGCCTTCATCACCACCTGCCTCGGCGCCTACATGATC
TTCGACAACAAGAGGCGCGACCGCAAGGCCGGCGTCCGCGTCGACCCCCGCGACATCCCGACCCAACGGCTGAGG
GACGGCCCGAGCGTCGAGGAATTCCGATGGTTCCTTTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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